RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 PARK7Q99497 189 aaKnown RBP14.4□□□□□ -0.1
TRAF3-208ENST00000560371 KLC2Q9H0B6 622 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 EXOC1LA0A1B0GW35 172 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 NUDT18Q6ZVK8 323 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 CENPUQ71F23 418 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 IFT43Q96FT9 208 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 PANX2Q96RD6 677 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 MMTAG2Q9BU76 263 aaKnown RBP14.4□□□□□ -0.1
TRAF3-208ENST00000560371 KATNAL1Q9BW62 490 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 HMGB1P1B2RPK0 211 aaPredicted RBP14.4□□□□□ -0.1
TRAF3-208ENST00000560371 TRAPPC3O43617 180 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 ALKBH8Q96BT7 664 aaKnown RBP14.4□□□□□ -0.1
TRAF3-208ENST00000560371 FIS1Q9Y3D6 152 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 RIMS1Q86UR5 1692 aaKnown RBP14.4□□□□□ -0.1
TRAF3-208ENST00000560371 ZMYND10O75800 440 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 TRIP13Q15645 432 aaPredicted RBP14.4□□□□□ -0.1
TRAF3-208ENST00000560371 KIAA1755Q5JYT7 1200 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 RNF149Q8NC42 400 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 A0A1B0GUA9 196 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 KYAT1Q16773 422 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 BBS9Q3SYG4 887 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 PHLDB3Q6NSJ2 640 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 CFAP61Q8NHU2 1237 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 BCAS4Q8TDM0 211 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 FAM217BQ9NTX9 383 aaPredicted RBP14.4□□□□□ -0.1
TRAF3-208ENST00000560371 AGO2Q9UKV8 859 aaKnown RBP14.4□□□□□ -0.1
TRAF3-208ENST00000560371 KDM6AO15550 1401 aaPredicted RBP14.39□□□□□ -0.11
TRAF3-208ENST00000560371 KIF28PB7ZC32 967 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 KCNA4P22459 653 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 YWHABP31946 246 aaKnown RBP14.39□□□□□ -0.11
TRAF3-208ENST00000560371 PRCPP42785 496 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 SCARF1Q14162 830 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 TMED2Q15363 201 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 ACCSLQ4AC99 568 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 FGD4Q96M96 766 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 FLT1P17948 1338 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 ACAP3Q96P50 834 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 BCL2L12Q9HB09 334 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 PNPLA7Q6ZV29 1317 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 COG7P83436 770 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 LINC00116Q8NCU8 138 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 MTMR4Q9NYA4 1195 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 CREB3O43889 395 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 GNA15P30679 374 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 SERPINB6P35237 376 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 EPHB4P54760 987 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 CDC42EP1Q00587 391 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 FAF2Q96CS3 445 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 PIN4Q9Y237 131 aaKnown RBP14.39□□□□□ -0.11
TRAF3-208ENST00000560371 EFNA5P52803 228 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 NAALADL2Q58DX5 795 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 STAG2Q8N3U4 1231 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 RCN2Q14257 317 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 SAAL1Q96ER3 474 aa14.39□□□□□ -0.11
TRAF3-208ENST00000560371 RBM41Q96IZ5 413 aaKnown RBP14.39□□□□□ -0.11
TRAF3-208ENST00000560371 ARHGEF40Q8TER5 1519 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 PLA2G12BQ9BX93 195 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 DR1Q01658 176 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 SLMAPQ14BN4 828 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 VSTM4Q8IW00 320 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 MARCH10Q8NA82 808 aaPredicted RBP14.38□□□□□ -0.11
TRAF3-208ENST00000560371 PDZD8Q8NEN9 1154 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 MAP3K7O43318 606 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 GPC5P78333 572 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 ADCY1Q08828 1119 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 FRA10AC1Q70Z53 315 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 CDC26Q8NHZ8 85 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 OXER1Q8TDS5 423 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 DAGLAQ9Y4D2 1042 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 PVALEFA0A1B0GWK0 134 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 HIP1RO75146 1068 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 TDP2O95551 362 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 SDC4P31431 198 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 C2orf54Q08AI8 447 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 TRIM62Q9BVG3 475 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 MYOZ2Q9NPC6 264 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 USP31Q70CQ4 1352 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 A8MXQ7 604 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 CASP1P29466 404 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 CDC27P30260 824 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 HUNKP57058 714 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 TFDP2Q14188 446 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 SMARCAD1Q9H4L7 1026 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 SYNGAP1Q96PV0 1343 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 MYO3AQ8NEV4 1616 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 TOM1L1O75674 476 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 CHEK2O96017 543 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 BAATQ14032 418 aaPredicted RBP14.38□□□□□ -0.11
TRAF3-208ENST00000560371 MXD4Q14582 209 aaPredicted RBP14.38□□□□□ -0.11
TRAF3-208ENST00000560371 TTC13Q8NBP0 860 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 MAGEB5Q9BZ81 275 aa14.38□□□□□ -0.11
TRAF3-208ENST00000560371 MUM1Q2TAK8 710 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 MADDQ8WXG6 1647 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 EVI5O60447 810 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 DHX9Q08211 1270 aaKnown RBP14.37□□□□□ -0.11
TRAF3-208ENST00000560371 IER5Q5VY09 327 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 STYK1Q6J9G0 422 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 MB21D2Q8IYB1 491 aaPredicted RBP14.37□□□□□ -0.11
TRAF3-208ENST00000560371 PPWD1Q96BP3 646 aaKnown RBP14.37□□□□□ -0.11
TRAF3-208ENST00000560371 ZNF560Q96MR9 790 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms