RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 MXD4Q14582 209 aaPredicted RBP14.73□□□□□ -0.05
SMAD3-213ENST00000560175 SRGAP1Q7Z6B7 1085 aa14.73□□□□□ -0.05
SMAD3-213ENST00000560175 ZNF598Q86UK7 904 aaKnown RBP14.73□□□□□ -0.05
SMAD3-213ENST00000560175 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.73□□□□□ -0.05
SMAD3-213ENST00000560175 FBXO22Q8NEZ5 403 aa14.73□□□□□ -0.05
SMAD3-213ENST00000560175 PIGOQ8TEQ8 1089 aa14.73□□□□□ -0.05
SMAD3-213ENST00000560175 SNX21Q969T3 373 aa14.73□□□□□ -0.05
SMAD3-213ENST00000560175 TMEM143Q96AN5 459 aa14.73□□□□□ -0.05
SMAD3-213ENST00000560175 ZNF668Q96K58 619 aaPredicted RBP14.73□□□□□ -0.05
SMAD3-213ENST00000560175 MTRQ99707 1265 aa14.73□□□□□ -0.05
SMAD3-213ENST00000560175 PLVAPQ9BX97 442 aa14.73□□□□□ -0.05
SMAD3-213ENST00000560175 NFKBIZQ9BYH8 718 aa14.73□□□□□ -0.05
SMAD3-213ENST00000560175 RNF19AQ9NV58 838 aa14.73□□□□□ -0.05
SMAD3-213ENST00000560175 STK24Q9Y6E0 443 aa14.73□□□□□ -0.05
SMAD3-213ENST00000560175 ATG2AQ2TAZ0 1938 aa14.72□□□□□ -0.05
SMAD3-213ENST00000560175 MYO7AQ13402 2215 aa14.72□□□□□ -0.05
SMAD3-213ENST00000560175 H3BQV1 296 aa14.72□□□□□ -0.05
SMAD3-213ENST00000560175 GTPBP6O43824 516 aaPredicted RBP14.72□□□□□ -0.05
SMAD3-213ENST00000560175 ZNF623O75123 536 aa14.72□□□□□ -0.05
SMAD3-213ENST00000560175 CSDE1O75534 798 aaKnown RBP14.72□□□□□ -0.05
SMAD3-213ENST00000560175 PTENP60484 403 aa14.72□□□□□ -0.05
SMAD3-213ENST00000560175 BTG3Q14201 252 aaPredicted RBP14.72□□□□□ -0.05
SMAD3-213ENST00000560175 PCBP1Q15365 356 aaKnown RBP eCLIP14.72□□□□□ -0.05
SMAD3-213ENST00000560175 ECM1Q16610 540 aa14.72□□□□□ -0.05
SMAD3-213ENST00000560175 NAALADL2Q58DX5 795 aa14.72□□□□□ -0.05
SMAD3-213ENST00000560175 ARL6IP4Q66PJ3 421 aaKnown RBP14.72□□□□□ -0.05
SMAD3-213ENST00000560175 ECHDC2Q86YB7 292 aa14.72□□□□□ -0.05
SMAD3-213ENST00000560175 ERMNQ8TAM6 284 aa14.72□□□□□ -0.05
SMAD3-213ENST00000560175 GDPD5Q8WTR4 605 aa14.72□□□□□ -0.05
SMAD3-213ENST00000560175 P2RX5Q93086 422 aa14.72□□□□□ -0.05
SMAD3-213ENST00000560175 MINDY3Q9H8M7 445 aa14.72□□□□□ -0.05
SMAD3-213ENST00000560175 DACT1Q9NYF0 836 aa14.72□□□□□ -0.05
SMAD3-213ENST00000560175 LRWD1Q9UFC0 647 aa14.72□□□□□ -0.05
SMAD3-213ENST00000560175 BRWD1Q9NSI6 2320 aa14.72□□□□□ -0.05
SMAD3-213ENST00000560175 A0A087WWV3 80 aa14.71□□□□□ -0.05
SMAD3-213ENST00000560175 ATF7P17544 494 aaPredicted RBP14.71□□□□□ -0.05
SMAD3-213ENST00000560175 FGFR4P22455 802 aa14.71□□□□□ -0.05
SMAD3-213ENST00000560175 SFPQP23246 707 aaKnown RBP eCLIP14.71□□□□□ -0.052e-6■■■□□ 17.4
SMAD3-213ENST00000560175 HOXA11P31270 313 aaPredicted RBP14.71□□□□□ -0.05
SMAD3-213ENST00000560175 FAM102BQ5T8I3 360 aa14.71□□□□□ -0.05
SMAD3-213ENST00000560175 HAUS3Q68CZ6 603 aa14.71□□□□□ -0.05
SMAD3-213ENST00000560175 MCTP1Q6DN14 999 aa14.71□□□□□ -0.05
SMAD3-213ENST00000560175 BRAPQ7Z569 592 aa14.71□□□□□ -0.05
SMAD3-213ENST00000560175 KCTD17Q8N5Z5 321 aa14.71□□□□□ -0.05
SMAD3-213ENST00000560175 MRPL38Q96DV4 380 aaKnown RBP14.71□□□□□ -0.05
SMAD3-213ENST00000560175 MMTAG2Q9BU76 263 aaKnown RBP14.71□□□□□ -0.05
SMAD3-213ENST00000560175 ATP6V0A4Q9HBG4 840 aa14.71□□□□□ -0.05
SMAD3-213ENST00000560175 MTUS1Q9ULD2 1270 aa14.71□□□□□ -0.05
SMAD3-213ENST00000560175 LRFN2Q9ULH4 789 aa14.71□□□□□ -0.05
SMAD3-213ENST00000560175 MRPL42Q9Y6G3 142 aaKnown RBP14.71□□□□□ -0.05
SMAD3-213ENST00000560175 K7ELQ4 463 aaPredicted RBP14.7□□□□□ -0.06
SMAD3-213ENST00000560175 SRGAP2CP0DJJ0 459 aa14.7□□□□□ -0.06
SMAD3-213ENST00000560175 PDCP20941 246 aa14.7□□□□□ -0.06
SMAD3-213ENST00000560175 GLRA2P23416 452 aa14.7□□□□□ -0.06
SMAD3-213ENST00000560175 GATMP50440 423 aa14.7□□□□□ -0.06
SMAD3-213ENST00000560175 GPM6BQ13491 265 aa14.7□□□□□ -0.06
SMAD3-213ENST00000560175 HYIQ5T013 277 aa14.7□□□□□ -0.06
SMAD3-213ENST00000560175 POTEGQ6S5H5 508 aa14.7□□□□□ -0.06
SMAD3-213ENST00000560175 DTHD1Q6ZMT9 781 aa14.7□□□□□ -0.06
SMAD3-213ENST00000560175 RNF149Q8NC42 400 aa14.7□□□□□ -0.06
SMAD3-213ENST00000560175 RSPH1Q8WYR4 309 aa14.7□□□□□ -0.06
SMAD3-213ENST00000560175 NLRP4Q96MN2 994 aa14.7□□□□□ -0.06
SMAD3-213ENST00000560175 SCLT1Q96NL6 688 aa14.7□□□□□ -0.06
SMAD3-213ENST00000560175 CASD1Q96PB1 797 aa14.7□□□□□ -0.06
SMAD3-213ENST00000560175 RAB34Q9BZG1 259 aa14.7□□□□□ -0.06
SMAD3-213ENST00000560175 TMEM117Q9H0C3 514 aa14.7□□□□□ -0.06
SMAD3-213ENST00000560175 LMAN2LQ9H0V9 348 aa14.7□□□□□ -0.06
SMAD3-213ENST00000560175 AGPAT5Q9NUQ2 364 aa14.7□□□□□ -0.06
SMAD3-213ENST00000560175 HOXA2O43364 376 aa14.69□□□□□ -0.06
SMAD3-213ENST00000560175 CYP11B2P19099 503 aa14.69□□□□□ -0.06
SMAD3-213ENST00000560175 PHKA2P46019 1235 aa14.69□□□□□ -0.06
SMAD3-213ENST00000560175 CAMK1Q14012 370 aa14.69□□□□□ -0.06
SMAD3-213ENST00000560175 COL19A1Q14993 1142 aa14.69□□□□□ -0.06
SMAD3-213ENST00000560175 CCDC85BQ15834 202 aaPredicted RBP14.69□□□□□ -0.06
SMAD3-213ENST00000560175 MRPL10Q7Z7H8 261 aaKnown RBP14.69□□□□□ -0.06
SMAD3-213ENST00000560175 MCPH1Q8NEM0 835 aa14.69□□□□□ -0.06
SMAD3-213ENST00000560175 ASAP3Q8TDY4 903 aa14.69□□□□□ -0.06
SMAD3-213ENST00000560175 ATXN2LQ8WWM7 1075 aaKnown RBP14.69□□□□□ -0.06
SMAD3-213ENST00000560175 C11orf84Q9BUA3 381 aaPredicted RBP14.69□□□□□ -0.06
SMAD3-213ENST00000560175 CWH43Q9H720 699 aa14.69□□□□□ -0.06
SMAD3-213ENST00000560175 PRDM6Q9NQX0 595 aa14.69□□□□□ -0.06
SMAD3-213ENST00000560175 PLAGL2Q9UPG8 496 aa14.69□□□□□ -0.06
SMAD3-213ENST00000560175 PLXNA4Q9HCM2 1894 aa14.68□□□□□ -0.06
SMAD3-213ENST00000560175 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.68□□□□□ -0.06
SMAD3-213ENST00000560175 FGFR1P11362 822 aa14.68□□□□□ -0.06
SMAD3-213ENST00000560175 SKIP12755 728 aa14.68□□□□□ -0.06
SMAD3-213ENST00000560175 SYT1P21579 422 aa14.68□□□□□ -0.06
SMAD3-213ENST00000560175 AXLP30530 894 aa14.68□□□□□ -0.06
SMAD3-213ENST00000560175 CTNNB1P35222 781 aa14.68□□□□□ -0.06
SMAD3-213ENST00000560175 CCT6AP40227 531 aaKnown RBP14.68□□□□□ -0.06
SMAD3-213ENST00000560175 CAPSQ13938 189 aa14.68□□□□□ -0.06
SMAD3-213ENST00000560175 AMHR2Q16671 573 aa14.68□□□□□ -0.06
SMAD3-213ENST00000560175 CLLU1OSQ5K130 101 aa14.68□□□□□ -0.06
SMAD3-213ENST00000560175 UBXN11Q5T124 520 aa14.68□□□□□ -0.06
SMAD3-213ENST00000560175 LRRC55Q6ZSA7 311 aa14.68□□□□□ -0.06
SMAD3-213ENST00000560175 CATSPER4Q7RTX7 472 aa14.68□□□□□ -0.06
SMAD3-213ENST00000560175 SPPL3Q8TCT6 385 aa14.68□□□□□ -0.06
SMAD3-213ENST00000560175 BMP2KQ9NSY1 1161 aaPredicted RBP14.68□□□□□ -0.06
SMAD3-213ENST00000560175 FAM105AQ9NUU6 356 aa14.68□□□□□ -0.06
SMAD3-213ENST00000560175 TYW1Q9NV66 732 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms