RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 NAT1P18440 290 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 HPCAP84074 193 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 SLC44A4Q53GD3 710 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 SLC27A3Q5K4L6 730 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 SPDYCQ5MJ68 293 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 CYB5R4Q7L1T6 521 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 CSGALNACT2Q8N6G5 542 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 NEK9Q8TD19 979 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 KCNN1Q92952 543 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 CATSPER2Q96P56 530 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 ZMYND12Q9H0C1 365 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 FAM207AQ9NSI2 230 aaPredicted RBP20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 SCN7AQ01118 1682 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 SPEF2Q9C093 1822 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 GYS1P13807 737 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 EPHB2P29323 1055 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 RNF43Q68DV7 783 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 RRAGAQ7L523 313 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 COL23A1Q86Y22 540 aaPredicted RBP20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 DHTKD1Q96HY7 919 aaPredicted RBP20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 ERGIC2Q96RQ1 377 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 TBC1D10AQ9BXI6 508 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 TRIM31Q9BZY9 425 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 GPR108Q9NPR9 543 aa20.62■□□□□ 0.89
SEMA4B-215ENST00000560089 GSTA3Q16772 222 aa20.61■□□□□ 0.89
SEMA4B-215ENST00000560089 C6orf118Q5T5N4 469 aa20.61■□□□□ 0.89
SEMA4B-215ENST00000560089 TPTE2Q6XPS3 522 aa20.61■□□□□ 0.89
SEMA4B-215ENST00000560089 SPATA24Q86W54 205 aa20.61■□□□□ 0.89
SEMA4B-215ENST00000560089 ATP11CQ8NB49 1132 aa20.61■□□□□ 0.89
SEMA4B-215ENST00000560089 CNOT6LQ96LI5 555 aaKnown RBP20.61■□□□□ 0.89
SEMA4B-215ENST00000560089 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.61■□□□□ 0.891e-6■■■■□ 22.9
SEMA4B-215ENST00000560089 UTP11Q9Y3A2 253 aaKnown RBP20.61■□□□□ 0.89
SEMA4B-215ENST00000560089 LRRC53A6NM62 1247 aa20.61■□□□□ 0.89
SEMA4B-215ENST00000560089 PSMA7O14818 248 aa20.61■□□□□ 0.89
SEMA4B-215ENST00000560089 TTI1O43156 1089 aa20.61■□□□□ 0.89
SEMA4B-215ENST00000560089 RAD21O60216 631 aa20.61■□□□□ 0.89
SEMA4B-215ENST00000560089 RPS6KA1Q15418 735 aa20.61■□□□□ 0.89
SEMA4B-215ENST00000560089 SOGA3Q5TF21 947 aa20.61■□□□□ 0.89
SEMA4B-215ENST00000560089 PDXDC2PQ6P474 469 aa20.61■□□□□ 0.89
SEMA4B-215ENST00000560089 TAOK1Q7L7X3 1001 aa20.61■□□□□ 0.89
SEMA4B-215ENST00000560089 ECHDC2Q86YB7 292 aa20.61■□□□□ 0.89
SEMA4B-215ENST00000560089 PPFIBP2Q8ND30 876 aa20.61■□□□□ 0.89
SEMA4B-215ENST00000560089 TDRD12Q587J7 1177 aaKnown RBP20.6■□□□□ 0.89
SEMA4B-215ENST00000560089 MAP7D3Q8IWC1 876 aa20.6■□□□□ 0.89
SEMA4B-215ENST00000560089 NRG4Q8WWG1 115 aa20.6■□□□□ 0.89
SEMA4B-215ENST00000560089 INPP5DQ92835 1189 aa20.6■□□□□ 0.89
SEMA4B-215ENST00000560089 OLFM3Q96PB7 478 aa20.6■□□□□ 0.89
SEMA4B-215ENST00000560089 MYLK2Q9H1R3 596 aa20.6■□□□□ 0.89
SEMA4B-215ENST00000560089 TRIM43BA6NCK2 446 aa20.6■□□□□ 0.89
SEMA4B-215ENST00000560089 FAM205CA6NFA0 338 aa20.6■□□□□ 0.89
SEMA4B-215ENST00000560089 EPHB6O15197 1021 aa20.6■□□□□ 0.89
SEMA4B-215ENST00000560089 SERPINB3P29508 390 aa20.6■□□□□ 0.89
SEMA4B-215ENST00000560089 ADCY1Q08828 1119 aa20.6■□□□□ 0.89
SEMA4B-215ENST00000560089 RCN1Q15293 331 aa20.6■□□□□ 0.89
SEMA4B-215ENST00000560089 KLC3Q6P597 504 aa20.6■□□□□ 0.89
SEMA4B-215ENST00000560089 SLC15A3Q8IY34 581 aa20.6■□□□□ 0.89
SEMA4B-215ENST00000560089 NAP1L3Q99457 506 aaPredicted RBP20.6■□□□□ 0.89
SEMA4B-215ENST00000560089 CCDC28BQ9BUN5 200 aa20.6■□□□□ 0.89
SEMA4B-215ENST00000560089 TXLNGYQ9BZA5 131 aa20.6■□□□□ 0.89
SEMA4B-215ENST00000560089 STMN4Q9H169 189 aaPredicted RBP20.6■□□□□ 0.89
SEMA4B-215ENST00000560089 METTL5Q9NRN9 209 aaKnown RBP20.6■□□□□ 0.89
SEMA4B-215ENST00000560089 KRIT1O00522 736 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 ECE2O60344 883 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 PHKA1P46020 1223 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 SLCO1A2P46721 670 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 PMS2P54278 862 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 NAB2Q15742 525 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 LRRC74BQ6ZQY2 392 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 TRIM22Q8IYM9 498 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 NAT14Q8WUY8 206 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 MPP4Q96JB8 637 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 NR1H4Q96RI1 486 aaPredicted RBP20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 DHX36Q9H2U1 1008 aaKnown RBP20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 EPB41L4BQ9H329 900 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 PABPC3Q9H361 631 aaKnown RBP20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 PRPF3O43395 683 aaKnown RBP20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 VCAM1P19320 739 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 KLRC1P26715 233 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 ZAP70P43403 619 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 CHRNDQ07001 517 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 KHDC1Q4VXA5 237 aaKnown RBP20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 SCUBE1Q8IWY4 988 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 DYDC2Q96IM9 177 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 CELF4Q9BZC1 486 aaKnown RBP20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 A6NJR5 290 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 PGRMC1O00264 195 aaKnown RBP20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 VAV1P15498 845 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 VARSP26640 1264 aaKnown RBP20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 HOXD12P35452 270 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 MIIPQ5JXC2 388 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 TTI2Q6NXR4 508 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 NKX2-3Q8TAU0 364 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 ERP27Q96DN0 273 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 ARPC5LQ9BPX5 153 aa20.59■□□□□ 0.89
SEMA4B-215ENST00000560089 CES2O00748 559 aa20.58■□□□□ 0.89
SEMA4B-215ENST00000560089 CDK7P50613 346 aa20.58■□□□□ 0.89
SEMA4B-215ENST00000560089 ADARP55265 1226 aaKnown RBP20.58■□□□□ 0.89
SEMA4B-215ENST00000560089 CCDC82Q8N4S0 544 aa20.58■□□□□ 0.89
SEMA4B-215ENST00000560089 NYXQ9GZU5 481 aa20.58■□□□□ 0.89
SEMA4B-215ENST00000560089 MMRN2Q9H8L6 949 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms