RNA–Protein interactions for RNA: ENST00000560043.1

AC105339.3-201, humanhuman

BASIC

Gene AC105339.3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.3-201ENST00000560043 CUL4AQ13619 759 aa19.28■□□□□ 0.68
AC105339.3-201ENST00000560043 RILPL1Q5EBL4 403 aa19.28■□□□□ 0.68
AC105339.3-201ENST00000560043 CATSPER4Q7RTX7 472 aa19.28■□□□□ 0.68
AC105339.3-201ENST00000560043 SRGAP1Q7Z6B7 1085 aa19.28■□□□□ 0.68
AC105339.3-201ENST00000560043 MRPL38Q96DV4 380 aaKnown RBP19.28■□□□□ 0.68
AC105339.3-201ENST00000560043 C11orf84Q9BUA3 381 aaPredicted RBP19.28■□□□□ 0.68
AC105339.3-201ENST00000560043 XPNPEP1Q9NQW7 623 aa19.28■□□□□ 0.68
AC105339.3-201ENST00000560043 THEGQ9P2T0 379 aa19.28■□□□□ 0.68
AC105339.3-201ENST00000560043 MRPL42Q9Y6G3 142 aaKnown RBP19.28■□□□□ 0.68
AC105339.3-201ENST00000560043 A0A087WWV3 80 aa19.27■□□□□ 0.68
AC105339.3-201ENST00000560043 TBKBP1A7MCY6 615 aa19.27■□□□□ 0.68
AC105339.3-201ENST00000560043 HOXA2O43364 376 aa19.27■□□□□ 0.68
AC105339.3-201ENST00000560043 MUTP22033 750 aa19.27■□□□□ 0.68
AC105339.3-201ENST00000560043 PDIA5Q14554 519 aa19.27■□□□□ 0.68
AC105339.3-201ENST00000560043 MXD4Q14582 209 aaPredicted RBP19.27■□□□□ 0.68
AC105339.3-201ENST00000560043 FAM102BQ5T8I3 360 aa19.27■□□□□ 0.68
AC105339.3-201ENST00000560043 HAUS3Q68CZ6 603 aa19.27■□□□□ 0.68
AC105339.3-201ENST00000560043 FERMT3Q86UX7 667 aa19.27■□□□□ 0.68
AC105339.3-201ENST00000560043 ECHDC2Q86YB7 292 aa19.27■□□□□ 0.68
AC105339.3-201ENST00000560043 PLVAPQ9BX97 442 aa19.27■□□□□ 0.68
AC105339.3-201ENST00000560043 RAB34Q9BZG1 259 aa19.27■□□□□ 0.68
AC105339.3-201ENST00000560043 IFT122Q9HBG6 1241 aa19.27■□□□□ 0.68
AC105339.3-201ENST00000560043 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.27■□□□□ 0.68
AC105339.3-201ENST00000560043 LRWD1Q9UFC0 647 aa19.27■□□□□ 0.68
AC105339.3-201ENST00000560043 DBR1Q9UK59 544 aaKnown RBP19.27■□□□□ 0.68
AC105339.3-201ENST00000560043 STK24Q9Y6E0 443 aa19.27■□□□□ 0.68
AC105339.3-201ENST00000560043 COL4A4P53420 1690 aaPredicted RBP19.27■□□□□ 0.67
AC105339.3-201ENST00000560043 A0A0U1RQF3 1178 aa19.26■□□□□ 0.67
AC105339.3-201ENST00000560043 CCT6AP40227 531 aaKnown RBP19.26■□□□□ 0.67
AC105339.3-201ENST00000560043 TFDP1Q14186 410 aa19.26■□□□□ 0.67
AC105339.3-201ENST00000560043 RNF149Q8NC42 400 aa19.26■□□□□ 0.67
AC105339.3-201ENST00000560043 ATXN2LQ8WWM7 1075 aaKnown RBP19.26■□□□□ 0.67
AC105339.3-201ENST00000560043 TRANK1O15050 2925 aa19.26■□□□□ 0.67
AC105339.3-201ENST00000560043 EOMESO95936 686 aa19.25■□□□□ 0.67
AC105339.3-201ENST00000560043 FGFR1P11362 822 aa19.25■□□□□ 0.67
AC105339.3-201ENST00000560043 PRPHP41219 470 aa19.25■□□□□ 0.67
AC105339.3-201ENST00000560043 PHKA2P46019 1235 aa19.25■□□□□ 0.67
AC105339.3-201ENST00000560043 NAALADL2Q58DX5 795 aa19.25■□□□□ 0.67
AC105339.3-201ENST00000560043 SPOUT1Q5T280 376 aaKnown RBP19.25■□□□□ 0.67
AC105339.3-201ENST00000560043 TWF2Q6IBS0 349 aaKnown RBP19.25■□□□□ 0.67
AC105339.3-201ENST00000560043 POTEGQ6S5H5 508 aa19.25■□□□□ 0.67
AC105339.3-201ENST00000560043 DTHD1Q6ZMT9 781 aa19.25■□□□□ 0.67
AC105339.3-201ENST00000560043 RNF169Q8NCN4 708 aa19.25■□□□□ 0.67
AC105339.3-201ENST00000560043 TMEM117Q9H0C3 514 aa19.25■□□□□ 0.67
AC105339.3-201ENST00000560043 LMAN2LQ9H0V9 348 aa19.25■□□□□ 0.67
AC105339.3-201ENST00000560043 PIN4Q9Y237 131 aaKnown RBP19.25■□□□□ 0.67
AC105339.3-201ENST00000560043 RALGAPA2Q2PPJ7 1873 aa19.24■□□□□ 0.67
AC105339.3-201ENST00000560043 USO1O60763 962 aaKnown RBP19.24■□□□□ 0.67
AC105339.3-201ENST00000560043 SKIP12755 728 aa19.24■□□□□ 0.67
AC105339.3-201ENST00000560043 PDCP20941 246 aa19.24■□□□□ 0.67
AC105339.3-201ENST00000560043 ARL2P36404 184 aa19.24■□□□□ 0.67
AC105339.3-201ENST00000560043 MRPS5P82675 430 aaKnown RBP19.24■□□□□ 0.67
AC105339.3-201ENST00000560043 POU5F1BQ06416 359 aa19.24■□□□□ 0.67
AC105339.3-201ENST00000560043 ABI1Q8IZP0 508 aa19.24■□□□□ 0.67
AC105339.3-201ENST00000560043 IGSF22Q8N9C0 903 aa19.24■□□□□ 0.67
AC105339.3-201ENST00000560043 MCPH1Q8NEM0 835 aa19.24■□□□□ 0.67
AC105339.3-201ENST00000560043 P2RX5Q93086 422 aa19.24■□□□□ 0.67
AC105339.3-201ENST00000560043 TRAIPQ9BWF2 469 aa19.24■□□□□ 0.67
AC105339.3-201ENST00000560043 MINDY3Q9H8M7 445 aa19.24■□□□□ 0.67
AC105339.3-201ENST00000560043 AAASQ9NRG9 546 aa19.24■□□□□ 0.67
AC105339.3-201ENST00000560043 COG5Q9UP83 839 aa19.24■□□□□ 0.67
AC105339.3-201ENST00000560043 NLRC5Q86WI3 1866 aa19.24■□□□□ 0.67
AC105339.3-201ENST00000560043 ARHGEF35A5YM69 484 aa19.23■□□□□ 0.67
AC105339.3-201ENST00000560043 GRM6O15303 877 aa19.23■□□□□ 0.67
AC105339.3-201ENST00000560043 PTENP60484 403 aa19.23■□□□□ 0.67
AC105339.3-201ENST00000560043 PCBP1Q15365 356 aaKnown RBP eCLIP19.23■□□□□ 0.67
AC105339.3-201ENST00000560043 TIGD5Q53EQ6 642 aa19.23■□□□□ 0.67
AC105339.3-201ENST00000560043 ZNF598Q86UK7 904 aaKnown RBP19.23■□□□□ 0.67
AC105339.3-201ENST00000560043 ASAP3Q8TDY4 903 aa19.23■□□□□ 0.67
AC105339.3-201ENST00000560043 SNX29Q8TEQ0 813 aa19.23■□□□□ 0.67
AC105339.3-201ENST00000560043 CASD1Q96PB1 797 aa19.23■□□□□ 0.67
AC105339.3-201ENST00000560043 POLR3FQ9H1D9 316 aaPredicted RBP19.23■□□□□ 0.67
AC105339.3-201ENST00000560043 AGPAT5Q9NUQ2 364 aa19.23■□□□□ 0.67
AC105339.3-201ENST00000560043 RNF19AQ9NV58 838 aa19.23■□□□□ 0.67
AC105339.3-201ENST00000560043 TYW1Q9NV66 732 aaKnown RBP19.23■□□□□ 0.67
AC105339.3-201ENST00000560043 PLAGL2Q9UPG8 496 aa19.23■□□□□ 0.67
AC105339.3-201ENST00000560043 PCDHB12Q9Y5F1 795 aa19.23■□□□□ 0.67
AC105339.3-201ENST00000560043 ARID2Q68CP9 1835 aa19.23■□□□□ 0.67
AC105339.3-201ENST00000560043 DLL1O00548 723 aa19.22■□□□□ 0.67
AC105339.3-201ENST00000560043 GLRA2P23416 452 aa19.22■□□□□ 0.67
AC105339.3-201ENST00000560043 RAB27AP51159 221 aa19.22■□□□□ 0.67
AC105339.3-201ENST00000560043 ATP2C1P98194 919 aaPredicted RBP19.22■□□□□ 0.67
AC105339.3-201ENST00000560043 IL17AQ16552 155 aa19.22■□□□□ 0.67
AC105339.3-201ENST00000560043 AAK1Q2M2I8 961 aa19.22■□□□□ 0.67
AC105339.3-201ENST00000560043 TJAP1Q5JTD0 557 aa19.22■□□□□ 0.67
AC105339.3-201ENST00000560043 KRT79Q5XKE5 535 aa19.22■□□□□ 0.67
AC105339.3-201ENST00000560043 PADI6Q6TGC4 694 aa19.22■□□□□ 0.67
AC105339.3-201ENST00000560043 BRAPQ7Z569 592 aa19.22■□□□□ 0.67
AC105339.3-201ENST00000560043 IFNLR1Q8IU57 520 aaPredicted RBP19.22■□□□□ 0.67
AC105339.3-201ENST00000560043 KLHL23Q8NBE8 558 aa19.22■□□□□ 0.67
AC105339.3-201ENST00000560043 HLA-CQ95604 372 aa19.22■□□□□ 0.67
AC105339.3-201ENST00000560043 KIAA1024Q9UPX6 916 aa19.22■□□□□ 0.67
AC105339.3-201ENST00000560043 VPS37CA5D8V6 355 aaPredicted RBP19.21■□□□□ 0.67
AC105339.3-201ENST00000560043 ZNF623O75123 536 aa19.21■□□□□ 0.67
AC105339.3-201ENST00000560043 ERLIN2O94905 339 aa19.21■□□□□ 0.67
AC105339.3-201ENST00000560043 ATF7P17544 494 aaPredicted RBP19.21■□□□□ 0.67
AC105339.3-201ENST00000560043 CYP11B2P19099 503 aa19.21■□□□□ 0.67
AC105339.3-201ENST00000560043 NCBP1Q09161 790 aaKnown RBP19.21■□□□□ 0.67
AC105339.3-201ENST00000560043 CAPSQ13938 189 aa19.21■□□□□ 0.67
AC105339.3-201ENST00000560043 ECM1Q16610 540 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms