RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.81□□□□□ -1
SMAD3-212ENST00000559937 STIM2Q9P246 746 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.81□□□□□ -1
SMAD3-212ENST00000559937 HPCAL4Q9UM19 191 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 EXOC7Q9UPT5 735 aa8.81□□□□□ -1
SMAD3-212ENST00000559937 ASTN2O75129 1339 aaPredicted RBP8.8□□□□□ -1
SMAD3-212ENST00000559937 A0A0U1RQG5 324 aaPredicted RBP8.8□□□□□ -1
SMAD3-212ENST00000559937 CCDC66A2RUB6 948 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 WDR64B1ANS9 1081 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 C19orf81C9J6K1 198 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 F8VZ95 297 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 H3BQF6 201 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 NFKBIEO00221 500 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 DDX3XO00571 662 aaKnown RBP eCLIP8.8□□□□□ -1
SMAD3-212ENST00000559937 ATP2A1O14983 1001 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 ZBTB39O15060 712 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 NCK2O43639 380 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 EVI5O60447 810 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 STAM2O75886 525 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 KIF4AO95239 1232 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 SCP2P22307 547 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 CCND2P30279 289 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 HADHBP55084 474 aaKnown RBP8.8□□□□□ -1
SMAD3-212ENST00000559937 RPS6P62753 249 aaKnown RBP8.8□□□□□ -1
SMAD3-212ENST00000559937 TNNC1P63316 161 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 APBA1Q02410 837 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 ARID5AQ03989 594 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 KIF22Q14807 665 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 TCEAL1Q15170 157 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 CLUL1Q15846 466 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 MUM1L1Q5H9M0 696 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 C8orf74Q6P047 294 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 EMBQ6PCB8 327 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 RNF207Q6ZRF8 634 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 NLRX1Q86UT6 975 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 APOBEC3FQ8IUX4 373 aaKnown RBP8.8□□□□□ -1
SMAD3-212ENST00000559937 ANKRD13CQ8N6S4 541 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 LRRC57Q8N9N7 239 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 XXYLT1Q8NBI6 393 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 CAVIN3Q969G5 261 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 TAAR1Q96RJ0 339 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 LRRC1Q9BTT6 524 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 RPAP3Q9H6T3 665 aaPredicted RBP8.8□□□□□ -1
SMAD3-212ENST00000559937 BCAS3Q9H6U6 928 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 C17orf75Q9HAS0 396 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 PXMP2Q9NR77 195 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 SUCLA2Q9P2R7 463 aaPredicted RBP8.8□□□□□ -1
SMAD3-212ENST00000559937 APEX2Q9UBZ4 518 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 DNAJC12Q9UKB3 198 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 DIS3Q9Y2L1 958 aaKnown RBP8.8□□□□□ -1
SMAD3-212ENST00000559937 PPP2R3BQ9Y5P8 575 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 LRRC37A2A6NM11 1700 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 NFASCO94856 1347 aa8.8□□□□□ -1
SMAD3-212ENST00000559937 LRRIQ3A6PVS8 624 aaPredicted RBP8.79□□□□□ -1
SMAD3-212ENST00000559937 FZD9O00144 591 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 DDX39AO00148 427 aaKnown RBP8.79□□□□□ -1
SMAD3-212ENST00000559937 VWA5AO00534 786 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 POLR3GO15318 223 aaPredicted RBP8.79□□□□□ -1
SMAD3-212ENST00000559937 TMEM253P0C7T8 217 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 YWHABP31946 246 aaKnown RBP8.79□□□□□ -1
SMAD3-212ENST00000559937 DSG3P32926 999 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 TNNT3P45378 269 aaPredicted RBP8.79□□□□□ -1
SMAD3-212ENST00000559937 CYP2J2P51589 502 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 VAMP7P51809 220 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 BACE1P56817 501 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 RTP1P59025 263 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 PAK2Q13177 524 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 COG2Q14746 738 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 DRAP1Q14919 205 aaPredicted RBP8.79□□□□□ -1
SMAD3-212ENST00000559937 RPS6KA1Q15418 735 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 EPC2Q52LR7 807 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 NOL9Q5SY16 702 aaKnown RBP8.79□□□□□ -1
SMAD3-212ENST00000559937 ARHGEF16Q5VV41 709 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 TAF3Q5VWG9 929 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 SAMD1Q6SPF0 538 aaPredicted RBP8.79□□□□□ -1
SMAD3-212ENST00000559937 SLC30A10Q6XR72 485 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 OTUD6AQ7L8S5 288 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 HAUS6Q7Z4H7 955 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 VSIG10LQ86VR7 867 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 IFT20Q8IY31 132 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 CPXCR1Q8N123 301 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 GOLGA6L1Q8N7Z2 621 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 USP38Q8NB14 1042 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 REPS2Q8NFH8 660 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 TPCN2Q8NHX9 752 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 OLIG1Q8TAK6 271 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 LMO3Q8TAP4 145 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 ACTRT1Q8TDG2 376 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 SPIRE2Q8WWL2 714 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 RFFLQ8WZ73 363 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 KIFAP3Q92845 792 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 KCNN1Q92952 543 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 CDHR1Q96JP9 859 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 PKNOX2Q96KN3 472 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 TRERF1Q96PN7 1200 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 RMDN3Q96TC7 470 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 PACSIN1Q9BY11 444 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 RNF146Q9NTX7 359 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 RNF216Q9NWF9 866 aaPredicted RBP8.79□□□□□ -1
SMAD3-212ENST00000559937 DMGDHQ9UI17 866 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms