RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 USP20Q9Y2K6 914 aa12.8□□□□□ -0.36
TM2D3-208ENST00000559891 ADGRA3Q8IWK6 1321 aa12.8□□□□□ -0.36
TM2D3-208ENST00000559891 IGKV6-21A0A0C4DH24 114 aa12.8□□□□□ -0.36
TM2D3-208ENST00000559891 ZEB2O60315 1214 aa12.8□□□□□ -0.36
TM2D3-208ENST00000559891 CSDE1O75534 798 aaKnown RBP12.8□□□□□ -0.36
TM2D3-208ENST00000559891 DGAT1O75907 488 aa12.8□□□□□ -0.36
TM2D3-208ENST00000559891 VTNP04004 478 aa12.8□□□□□ -0.36
TM2D3-208ENST00000559891 CD44P16070 742 aaKnown RBP12.8□□□□□ -0.36
TM2D3-208ENST00000559891 GUCY2CP25092 1073 aa12.8□□□□□ -0.36
TM2D3-208ENST00000559891 NMT1P30419 496 aaKnown RBP12.8□□□□□ -0.36
TM2D3-208ENST00000559891 ATN1P54259 1190 aaPredicted RBP12.8□□□□□ -0.36
TM2D3-208ENST00000559891 AMPD3Q01432 767 aa12.8□□□□□ -0.36
TM2D3-208ENST00000559891 KCNA1Q09470 495 aa12.8□□□□□ -0.36
TM2D3-208ENST00000559891 TPD52L1Q16890 204 aaPredicted RBP12.8□□□□□ -0.36
TM2D3-208ENST00000559891 ZC2HC1CQ53FD0 456 aaPredicted RBP12.8□□□□□ -0.36
TM2D3-208ENST00000559891 HERC4Q5GLZ8 1057 aaPredicted RBP12.8□□□□□ -0.36
TM2D3-208ENST00000559891 ELOA2Q8IYF1 753 aaPredicted RBP12.8□□□□□ -0.36
TM2D3-208ENST00000559891 ARRDC4Q8NCT1 418 aa12.8□□□□□ -0.36
TM2D3-208ENST00000559891 KIAA0895Q8NCT3 520 aa12.8□□□□□ -0.36
TM2D3-208ENST00000559891 SLC7A3Q8WY07 619 aa12.8□□□□□ -0.36
TM2D3-208ENST00000559891 GTPBP4Q9BZE4 634 aaKnown RBP12.8□□□□□ -0.36
TM2D3-208ENST00000559891 FAM49AQ9H0Q0 323 aaPredicted RBP12.8□□□□□ -0.36
TM2D3-208ENST00000559891 POLR3FQ9H1D9 316 aaPredicted RBP12.8□□□□□ -0.36
TM2D3-208ENST00000559891 ATP6V0A4Q9HBG4 840 aa12.8□□□□□ -0.36
TM2D3-208ENST00000559891 PCDHA2Q9Y5H9 948 aa12.8□□□□□ -0.36
TM2D3-208ENST00000559891 LOXHD1Q8IVV2 1947 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 FRMD3A2A2Y4 597 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 PEX3P56589 373 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 ZNF484Q5JVG2 852 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 NFRKBQ6P4R8 1299 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 UNC13DQ70J99 1090 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 DHX40Q8IX18 779 aaKnown RBP12.79□□□□□ -0.36
TM2D3-208ENST00000559891 KCTD17Q8N5Z5 321 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 MYCT1Q8N699 235 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 PRPF31Q8WWY3 499 aaKnown RBP12.79□□□□□ -0.36
TM2D3-208ENST00000559891 SENP6Q9GZR1 1112 aaPredicted RBP12.79□□□□□ -0.36
TM2D3-208ENST00000559891 STARD7Q9NQZ5 370 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 GTF2IRD1Q9UHL9 959 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 PHF24Q9UPV7 400 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 NRCAMQ92823 1304 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 C17orf102A2RUQ5 167 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 MOXD2PA6NHM9 499 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 KBTBD13C9JR72 458 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 DNM1LO00429 736 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 MYBP10242 640 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 EN2P19622 333 aaPredicted RBP12.79□□□□□ -0.36
TM2D3-208ENST00000559891 GLRA2P23416 452 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 HOXC8P31273 242 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 GJA8P48165 433 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 MORC3Q14149 939 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 CNNM4Q6P4Q7 775 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 KIAA0319LQ8IZA0 1049 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 LINC01465Q8N7H1 131 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 CCDC112Q8NEF3 446 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 GLT1D1Q96MS3 346 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 OSBPL7Q9BZF2 842 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 TRPV6Q9H1D0 765 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 CDHR5Q9HBB8 845 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 KCND1Q9NSA2 647 aa12.79□□□□□ -0.36
TM2D3-208ENST00000559891 MBLAC1A4D2B0 266 aaPredicted RBP12.78□□□□□ -0.36
TM2D3-208ENST00000559891 BECN2A8MW95 431 aa12.78□□□□□ -0.36
TM2D3-208ENST00000559891 SLC16A4O15374 487 aa12.78□□□□□ -0.36
TM2D3-208ENST00000559891 KPNA6O60684 536 aa12.78□□□□□ -0.36
TM2D3-208ENST00000559891 RHOBTB3O94955 611 aa12.78□□□□□ -0.36
TM2D3-208ENST00000559891 FAM13AO94988 1023 aa12.78□□□□□ -0.36
TM2D3-208ENST00000559891 ARL2P36404 184 aa12.78□□□□□ -0.36
TM2D3-208ENST00000559891 ZNF131P52739 623 aa12.78□□□□□ -0.36
TM2D3-208ENST00000559891 ODR4Q5SWX8 454 aa12.78□□□□□ -0.36
TM2D3-208ENST00000559891 RHPN2Q8IUC4 686 aa12.78□□□□□ -0.36
TM2D3-208ENST00000559891 DNAJB3Q8WWF6 145 aa12.78□□□□□ -0.36
TM2D3-208ENST00000559891 GSDMAQ96QA5 445 aa12.78□□□□□ -0.36
TM2D3-208ENST00000559891 MED15Q96RN5 788 aa12.78□□□□□ -0.36
TM2D3-208ENST00000559891 KATNAL1Q9BW62 490 aa12.78□□□□□ -0.36
TM2D3-208ENST00000559891 TBCAO75347 108 aaKnown RBP12.77□□□□□ -0.36
TM2D3-208ENST00000559891 CYP2C9P11712 490 aa12.77□□□□□ -0.36
TM2D3-208ENST00000559891 RFC5P40937 340 aa12.77□□□□□ -0.36
TM2D3-208ENST00000559891 NPTX2P47972 431 aa12.77□□□□□ -0.36
TM2D3-208ENST00000559891 CAPSQ13938 189 aa12.77□□□□□ -0.36
TM2D3-208ENST00000559891 CEP135Q66GS9 1140 aa12.77□□□□□ -0.36
TM2D3-208ENST00000559891 NYAP1Q6ZVC0 841 aa12.77□□□□□ -0.36
TM2D3-208ENST00000559891 PAWRQ96IZ0 340 aaKnown RBP12.77□□□□□ -0.36
TM2D3-208ENST00000559891 TSEN34Q9BSV6 310 aaKnown RBP12.77□□□□□ -0.36
TM2D3-208ENST00000559891 PARVGQ9HBI0 331 aa12.77□□□□□ -0.36
TM2D3-208ENST00000559891 EXOC1Q9NV70 894 aa12.77□□□□□ -0.36
TM2D3-208ENST00000559891 SUCLA2Q9P2R7 463 aaPredicted RBP12.77□□□□□ -0.36
TM2D3-208ENST00000559891 HOOK1Q9UJC3 728 aaKnown RBP12.77□□□□□ -0.36
TM2D3-208ENST00000559891 PVALEFA0A1B0GWK0 134 aa12.77□□□□□ -0.37
TM2D3-208ENST00000559891 TTLL13PA6NNM8 815 aa12.77□□□□□ -0.37
TM2D3-208ENST00000559891 B4GALT4O60513 344 aa12.77□□□□□ -0.37
TM2D3-208ENST00000559891 SMC2O95347 1197 aa12.77□□□□□ -0.37
TM2D3-208ENST00000559891 EDN1P05305 212 aa12.77□□□□□ -0.37
TM2D3-208ENST00000559891 SRGAP2CP0DJJ0 459 aa12.77□□□□□ -0.37
TM2D3-208ENST00000559891 HOXD13P35453 343 aa12.77□□□□□ -0.37
TM2D3-208ENST00000559891 PRCPP42785 496 aa12.77□□□□□ -0.37
TM2D3-208ENST00000559891 CCDC65Q8IXS2 484 aa12.77□□□□□ -0.37
TM2D3-208ENST00000559891 NAT10Q9H0A0 1025 aaKnown RBP12.77□□□□□ -0.37
TM2D3-208ENST00000559891 KCND2Q9NZV8 630 aa12.77□□□□□ -0.37
TM2D3-208ENST00000559891 CGNQ9P2M7 1197 aaKnown RBP12.77□□□□□ -0.37
TM2D3-208ENST00000559891 ODF2LQ9ULJ1 636 aa12.77□□□□□ -0.37
TM2D3-208ENST00000559891 GINS2Q9Y248 185 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms