RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 ADAM2Q99965 735 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 RGS18Q9NS28 235 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 RNF216Q9NWF9 866 aaPredicted RBP15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 MTMR10Q9NXD2 777 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 MORC2Q9Y6X9 1032 aaPredicted RBP15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 HTRA4P83105 476 aaPredicted RBP15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 GRIN1Q05586 938 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 PKP1Q13835 747 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 TFDP1Q14186 410 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 PPP2R2DQ66LE6 453 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 SLC24A5Q71RS6 500 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 MAEAQ7L5Y9 396 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 SRGAP1Q7Z6B7 1085 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 CALML4Q96GE6 196 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 CHST12Q9NRB3 414 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 C1orf112Q9NSG2 853 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 CHD7Q9P2D1 2997 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 MGEA5O60502 916 aa15.17■□□□□ 0.02
CHRNB4-204ENST00000559849 FGFR4P22455 802 aa15.17■□□□□ 0.02
CHRNB4-204ENST00000559849 NASPP49321 788 aaPredicted RBP15.17■□□□□ 0.02
CHRNB4-204ENST00000559849 PNMA5Q96PV4 448 aa15.17■□□□□ 0.02
CHRNB4-204ENST00000559849 YME1L1Q96TA2 773 aa15.17■□□□□ 0.02
CHRNB4-204ENST00000559849 POLR3FQ9H1D9 316 aaPredicted RBP15.17■□□□□ 0.02
CHRNB4-204ENST00000559849 TFIP11Q9UBB9 837 aaKnown RBP15.17■□□□□ 0.02
CHRNB4-204ENST00000559849 FBXO2Q9UK22 296 aaPredicted RBP15.17■□□□□ 0.02
CHRNB4-204ENST00000559849 STAG3L1P0CL83 205 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 GLRA2P23416 452 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 PHKA2P46019 1235 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 GRB10Q13322 594 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 DSC3Q14574 896 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 STK38Q15208 465 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 FAM102BQ5T8I3 360 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 ATL3Q6DD88 541 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 KCNK18Q7Z418 384 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 NPAS4Q8IUM7 802 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 CRIPAKQ8N1N5 446 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 CSRNP2Q9H175 543 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 DACT1Q9NYF0 836 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 MYH15Q9Y2K3 1946 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 C9IYK1 514 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 SARSP49591 514 aaKnown RBP15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 PTENP60484 403 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 PCBP1Q15365 356 aaKnown RBP eCLIP15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 CATSPER4Q7RTX7 472 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 LINC00301Q8NCQ3 95 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 ASAP3Q8TDY4 903 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 PLIN2Q99541 437 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 NFKBIZQ9BYH8 718 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 GPRC5CQ9NQ84 441 aa15.16■□□□□ 0.02
CHRNB4-204ENST00000559849 LCHNA4D1U4 455 aa15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 FAM189BP81408 668 aa15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 TAP1Q03518 808 aa15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 CAPSQ13938 189 aa15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 GRIN2CQ14957 1233 aa15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 IFNLR1Q8IU57 520 aaPredicted RBP15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 KRI1Q8N9T8 703 aaKnown RBP15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 KIFAP3Q92845 792 aa15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 CCSER1Q9C0I3 900 aa15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 MINDY3Q9H8M7 445 aa15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 LRFN2Q9ULH4 789 aa15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 PCDHB7Q9Y5E2 793 aa15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 DGKIO75912 1065 aa15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 TMEM119Q4V9L6 283 aa15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 RINT1Q6NUQ1 792 aa15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 SYT2Q8N9I0 419 aaPredicted RBP15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 RASSF8Q8NHQ8 419 aa15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 SP7Q8TDD2 431 aaPredicted RBP15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 EPSTI1Q96J88 318 aa15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 CLIC6Q96NY7 704 aa15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 IPO9Q96P70 1041 aaKnown RBP15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 DAXXQ9UER7 740 aaPredicted RBP15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 CFAP45Q9UL16 551 aa15.15■□□□□ 0.02
CHRNB4-204ENST00000559849 TRANK1O15050 2925 aa15.14■□□□□ 0.01
CHRNB4-204ENST00000559849 SPTLC2O15270 562 aa15.14■□□□□ 0.01
CHRNB4-204ENST00000559849 PPP6R2O75170 966 aa15.14■□□□□ 0.01
CHRNB4-204ENST00000559849 YEATS4O95619 227 aa15.14■□□□□ 0.01
CHRNB4-204ENST00000559849 BRD1O95696 1058 aa15.14■□□□□ 0.01
CHRNB4-204ENST00000559849 NCBP1Q09161 790 aaKnown RBP15.14■□□□□ 0.01
CHRNB4-204ENST00000559849 FOXD4L6Q3SYB3 417 aaPredicted RBP15.14■□□□□ 0.01
CHRNB4-204ENST00000559849 SPECC1Q5M775 1068 aa15.14■□□□□ 0.01
CHRNB4-204ENST00000559849 FOXD4L3Q6VB84 417 aaPredicted RBP15.14■□□□□ 0.01
CHRNB4-204ENST00000559849 C1orf186Q6ZWK4 172 aa15.14■□□□□ 0.01
CHRNB4-204ENST00000559849 ZNF689Q96CS4 500 aaPredicted RBP15.14■□□□□ 0.01
CHRNB4-204ENST00000559849 CDX2Q99626 313 aaPredicted RBP15.14■□□□□ 0.01
CHRNB4-204ENST00000559849 TRAIPQ9BWF2 469 aa15.14■□□□□ 0.01
CHRNB4-204ENST00000559849 ELAC1Q9H777 363 aaKnown RBP15.14■□□□□ 0.01
CHRNB4-204ENST00000559849 TMEM161AQ9NX61 479 aa15.14■□□□□ 0.01
CHRNB4-204ENST00000559849 KCND2Q9NZV8 630 aa15.14■□□□□ 0.01
CHRNB4-204ENST00000559849 PIN4Q9Y237 131 aaKnown RBP15.14■□□□□ 0.01
CHRNB4-204ENST00000559849 A0A0U1RQF3 1178 aa15.13■□□□□ 0.01
CHRNB4-204ENST00000559849 LINC01553A4QN01 128 aa15.13■□□□□ 0.01
CHRNB4-204ENST00000559849 INO80B-WBP1J3KQ70 363 aa15.13■□□□□ 0.01
CHRNB4-204ENST00000559849 SSBP05455 408 aaKnown RBP eCLIP15.13■□□□□ 0.01
CHRNB4-204ENST00000559849 PLA2G4BP0C869 781 aa15.13■□□□□ 0.01
CHRNB4-204ENST00000559849 KARSQ15046 597 aaKnown RBP15.13■□□□□ 0.01
CHRNB4-204ENST00000559849 PPP2R5AQ15172 486 aa15.13■□□□□ 0.01
CHRNB4-204ENST00000559849 IFT74Q96LB3 600 aa15.13■□□□□ 0.01
CHRNB4-204ENST00000559849 GUCD1Q96NT3 240 aa15.13■□□□□ 0.01
CHRNB4-204ENST00000559849 CCDC39Q9UFE4 941 aa15.13■□□□□ 0.01
CHRNB4-204ENST00000559849 LRRIQ4A6NIV6 560 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms