RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 FXR2P51116 673 aaKnown RBP eCLIP12.21□□□□□ -0.45
SPG11-216ENST00000559347 FAM189BP81408 668 aa12.21□□□□□ -0.45
SPG11-216ENST00000559347 C4orf32Q8N8J7 132 aa12.21□□□□□ -0.45
SPG11-216ENST00000559347 PIGOQ8TEQ8 1089 aa12.21□□□□□ -0.45
SPG11-216ENST00000559347 TCP11Q8WWU5 503 aa12.21□□□□□ -0.45
SPG11-216ENST00000559347 PRPF31Q8WWY3 499 aaKnown RBP12.21□□□□□ -0.45
SPG11-216ENST00000559347 PSPC1Q8WXF1 523 aaKnown RBP12.21□□□□□ -0.45
SPG11-216ENST00000559347 TMEM143Q96AN5 459 aa12.21□□□□□ -0.45
SPG11-216ENST00000559347 MRPL38Q96DV4 380 aaKnown RBP12.21□□□□□ -0.45
SPG11-216ENST00000559347 CCDC43Q96MW1 224 aaKnown RBP12.21□□□□□ -0.45
SPG11-216ENST00000559347 C11orf84Q9BUA3 381 aaPredicted RBP12.21□□□□□ -0.45
SPG11-216ENST00000559347 INO80BQ9C086 356 aaPredicted RBP12.21□□□□□ -0.45
SPG11-216ENST00000559347 ATP6V0A4Q9HBG4 840 aa12.21□□□□□ -0.45
SPG11-216ENST00000559347 TUFT1Q9NNX1 390 aa12.21□□□□□ -0.45
SPG11-216ENST00000559347 ANKEF1Q9NU02 776 aa12.21□□□□□ -0.45
SPG11-216ENST00000559347 RNF19AQ9NV58 838 aa12.21□□□□□ -0.45
SPG11-216ENST00000559347 PCDHB6Q9Y5E3 794 aa12.21□□□□□ -0.45
SPG11-216ENST00000559347 C5orf42Q9H799 3197 aa12.21□□□□□ -0.46
SPG11-216ENST00000559347 MYH11P35749 1972 aa12.21□□□□□ -0.46
SPG11-216ENST00000559347 TCF20Q9UGU0 1960 aaKnown RBP12.21□□□□□ -0.46
SPG11-216ENST00000559347 TBKBP1A7MCY6 615 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 DGAT1O75907 488 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 RB1P06400 928 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 FGFR1P11362 822 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 ATF7P17544 494 aaPredicted RBP12.2□□□□□ -0.46
SPG11-216ENST00000559347 LAMTOR4Q0VGL1 99 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 SKIV2LQ15477 1246 aaKnown RBP12.2□□□□□ -0.46
SPG11-216ENST00000559347 PTPROQ16827 1216 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 TIGD5Q53EQ6 642 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 TJAP1Q5JTD0 557 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 FAM102BQ5T8I3 360 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 HAUS3Q68CZ6 603 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 MCTP1Q6DN14 999 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 POTEGQ6S5H5 508 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 FERMT3Q86UX7 667 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 CATSPER3Q86XQ3 398 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 ECHDC2Q86YB7 292 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 ATXN2LQ8WWM7 1075 aaKnown RBP12.2□□□□□ -0.46
SPG11-216ENST00000559347 P2RX5Q93086 422 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 POLR3CQ9BUI4 534 aaPredicted RBP12.2□□□□□ -0.46
SPG11-216ENST00000559347 PLVAPQ9BX97 442 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 COL25A1Q9BXS0 654 aaPredicted RBP12.2□□□□□ -0.46
SPG11-216ENST00000559347 MINDY3Q9H8M7 445 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 HCSTQ9UBK5 93 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 SMC3Q9UQE7 1217 aa12.2□□□□□ -0.46
SPG11-216ENST00000559347 PIN4Q9Y237 131 aaKnown RBP12.2□□□□□ -0.46
SPG11-216ENST00000559347 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.2□□□□□ -0.46
SPG11-216ENST00000559347 A0A0U1RQF3 1178 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 H3BQV1 296 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 LAD1O00515 517 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 GRM6O15303 877 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 HOXA2O43364 376 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 USO1O60763 962 aaKnown RBP12.19□□□□□ -0.46
SPG11-216ENST00000559347 RPA1P27694 616 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 TFF2Q03403 129 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 PTGDRQ13258 359 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 CUL4AQ13619 759 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 CATSPER4Q7RTX7 472 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 SRGAP1Q7Z6B7 1085 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 ZNF598Q86UK7 904 aaKnown RBP12.19□□□□□ -0.46
SPG11-216ENST00000559347 IGSF22Q8N9C0 903 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 RNF149Q8NC42 400 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 ERMNQ8TAM6 284 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 TRAIPQ9BWF2 469 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 TMEM117Q9H0C3 514 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 LMAN2LQ9H0V9 348 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.19□□□□□ -0.46
SPG11-216ENST00000559347 CHST12Q9NRB3 414 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 AGPAT5Q9NUQ2 364 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 DACT1Q9NYF0 836 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 DBR1Q9UK59 544 aaKnown RBP12.19□□□□□ -0.46
SPG11-216ENST00000559347 MYO7AQ13402 2215 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 BDP1A6H8Y1 2624 aa12.19□□□□□ -0.46
SPG11-216ENST00000559347 TTC28Q96AY4 2481 aa12.18□□□□□ -0.46
SPG11-216ENST00000559347 A0A087WWV3 80 aa12.18□□□□□ -0.46
SPG11-216ENST00000559347 DLL1O00548 723 aa12.18□□□□□ -0.46
SPG11-216ENST00000559347 ASAP2O43150 1006 aa12.18□□□□□ -0.46
SPG11-216ENST00000559347 ITGB1P05556 798 aa12.18□□□□□ -0.46
SPG11-216ENST00000559347 SRGAP2CP0DJJ0 459 aa12.18□□□□□ -0.46
SPG11-216ENST00000559347 XRCC6P12956 609 aaKnown RBP eCLIP12.18□□□□□ -0.46
SPG11-216ENST00000559347 MUTP22033 750 aa12.18□□□□□ -0.46
SPG11-216ENST00000559347 PRPHP41219 470 aa12.18□□□□□ -0.46
SPG11-216ENST00000559347 PHKA2P46019 1235 aa12.18□□□□□ -0.46
SPG11-216ENST00000559347 MRPS5P82675 430 aaKnown RBP12.18□□□□□ -0.46
SPG11-216ENST00000559347 CAPSQ13938 189 aa12.18□□□□□ -0.46
SPG11-216ENST00000559347 MXD4Q14582 209 aaPredicted RBP12.18□□□□□ -0.46
SPG11-216ENST00000559347 RILPL1Q5EBL4 403 aa12.18□□□□□ -0.46
SPG11-216ENST00000559347 CLLU1OSQ5K130 101 aa12.18□□□□□ -0.46
SPG11-216ENST00000559347 TWF2Q6IBS0 349 aaKnown RBP12.18□□□□□ -0.46
SPG11-216ENST00000559347 LRRC43Q8N309 656 aa12.18□□□□□ -0.46
SPG11-216ENST00000559347 ASAP3Q8TDY4 903 aa12.18□□□□□ -0.46
SPG11-216ENST00000559347 CASD1Q96PB1 797 aa12.18□□□□□ -0.46
SPG11-216ENST00000559347 ASB2Q96Q27 587 aa12.18□□□□□ -0.46
SPG11-216ENST00000559347 CWH43Q9H720 699 aa12.18□□□□□ -0.46
SPG11-216ENST00000559347 LRWD1Q9UFC0 647 aa12.18□□□□□ -0.46
SPG11-216ENST00000559347 COG5Q9UP83 839 aa12.18□□□□□ -0.46
SPG11-216ENST00000559347 EOMESO95936 686 aa12.17□□□□□ -0.46
SPG11-216ENST00000559347 GLRA2P23416 452 aa12.17□□□□□ -0.46
SPG11-216ENST00000559347 ARL2P36404 184 aa12.17□□□□□ -0.46
SPG11-216ENST00000559347 CCT6AP40227 531 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms