RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 DRP2Q13474 957 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 CUL4AQ13619 759 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 NBR1Q14596 966 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 ZRSR1Q15695 479 aaKnown RBP4.86□□□□□ -1.63
SNX1-205ENST00000559339 CCDC85BQ15834 202 aaPredicted RBP4.86□□□□□ -1.63
SNX1-205ENST00000559339 CSPP1Q1MSJ5 1256 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 AAK1Q2M2I8 961 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 EPC2Q52LR7 807 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 SPOUT1Q5T280 376 aaKnown RBP4.86□□□□□ -1.63
SNX1-205ENST00000559339 CATSPER4Q7RTX7 472 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 FERMT3Q86UX7 667 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 FAM228AQ86W67 206 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.86□□□□□ -1.63
SNX1-205ENST00000559339 TMEM192Q8IY95 271 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 CMTR2Q8IYT2 770 aaKnown RBP4.86□□□□□ -1.63
SNX1-205ENST00000559339 MICALL1Q8N3F8 863 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 IGSF22Q8N9C0 903 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 FBXO22Q8NEZ5 403 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 RASSF8Q8NHQ8 419 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 SP7Q8TDD2 431 aaPredicted RBP4.86□□□□□ -1.63
SNX1-205ENST00000559339 SNX29Q8TEQ0 813 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 PIGOQ8TEQ8 1089 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 PPP2R3CQ969Q6 453 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 PGBD4Q96DM1 585 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 CDK5RAP3Q96JB5 506 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 ZNF668Q96K58 619 aaPredicted RBP4.86□□□□□ -1.63
SNX1-205ENST00000559339 AK8Q96MA6 479 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 CEP89Q96ST8 783 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 C11orf84Q9BUA3 381 aaPredicted RBP4.86□□□□□ -1.63
SNX1-205ENST00000559339 PLVAPQ9BX97 442 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 OSBPL7Q9BZF2 842 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 NT5C3AQ9H0P0 336 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 TMX1Q9H3N1 280 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 ZSCAN16Q9H4T2 348 aaPredicted RBP4.86□□□□□ -1.63
SNX1-205ENST00000559339 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.86□□□□□ -1.63
SNX1-205ENST00000559339 BMP2KQ9NSY1 1161 aaPredicted RBP4.86□□□□□ -1.63
SNX1-205ENST00000559339 TMEM161AQ9NX61 479 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 LMCD1Q9NZU5 365 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 WRAP73Q9P2S5 460 aaPredicted RBP4.86□□□□□ -1.63
SNX1-205ENST00000559339 KCNG1Q9UIX4 513 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 DBR1Q9UK59 544 aaKnown RBP4.86□□□□□ -1.63
SNX1-205ENST00000559339 KIAA1024Q9UPX6 916 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 PIN4Q9Y237 131 aaKnown RBP4.86□□□□□ -1.63
SNX1-205ENST00000559339 PCDHB12Q9Y5F1 795 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 TANC1Q9C0D5 1861 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 VWA3AA6NCI4 1184 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 LRRIQ4A6NIV6 560 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 TBKBP1A7MCY6 615 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 C9IYK1 514 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 C5orf67F2Z3F1 127 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 H3BNC9 293 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 ZBTB39O15060 712 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 NCK2O43639 380 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 STX6O43752 255 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 MED24O75448 989 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 CSDE1O75534 798 aaKnown RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 SPATA31C1P0DKV0 1188 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 CHRM1P11229 460 aaPredicted RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 POU3F3P20264 500 aaPredicted RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 AXLP30530 894 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 TXLNAP40222 546 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 UBA7P41226 1012 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 ALDH7A1P49419 539 aaKnown RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 TOB1P50616 345 aaPredicted RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 ATP2C1P98194 919 aaPredicted RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 KRT17Q04695 432 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 DMP1Q13316 513 aaPredicted RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 GRB10Q13322 594 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 GPM6BQ13491 265 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 BMS1Q14692 1282 aaKnown RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 PPP2R5AQ15172 486 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 TMEM132AQ24JP5 1023 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 PAN2Q504Q3 1202 aaKnown RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 TIGD5Q53EQ6 642 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 NAALADL2Q58DX5 795 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 FAM102BQ5T8I3 360 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 NOTUMQ6P988 496 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 POTEGQ6S5H5 508 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 PADI6Q6TGC4 694 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 GLB1LQ6UWU2 654 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 MAEAQ7L5Y9 396 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 APBB1IPQ7Z5R6 666 aaPredicted RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 RTN4RL1Q86UN2 441 aaPredicted RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 ECHDC2Q86YB7 292 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 KSR1Q8IVT5 923 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 ZBTB8OSQ8IWT0 167 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 HACE1Q8IYU2 909 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 LRRC43Q8N309 656 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 C4orf32Q8N8J7 132 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 ZNF579Q8NAF0 562 aaKnown RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 RNF169Q8NCN4 708 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 CNNM3Q8NE01 707 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 DEPTORQ8TB45 409 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 GDPD5Q8WTR4 605 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 ATXN2LQ8WWM7 1075 aaKnown RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 KIFAP3Q92845 792 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 CLP1Q92989 425 aaKnown RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 P2RX5Q93086 422 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 SNX21Q969T3 373 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 ZNF689Q96CS4 500 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms