RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 TTC38Q5R3I4 469 aa23.97■■□□□ 1.43
CRNDE-205ENST00000558952 CATSPER4Q7RTX7 472 aa23.97■■□□□ 1.43
CRNDE-205ENST00000558952 ECHDC2Q86YB7 292 aa23.97■■□□□ 1.43
CRNDE-205ENST00000558952 PRPF31Q8WWY3 499 aaKnown RBP23.97■■□□□ 1.43
CRNDE-205ENST00000558952 MTRQ99707 1265 aa23.97■■□□□ 1.43
CRNDE-205ENST00000558952 TMEM117Q9H0C3 514 aa23.97■■□□□ 1.43
CRNDE-205ENST00000558952 PLAGL2Q9UPG8 496 aa23.97■■□□□ 1.43
CRNDE-205ENST00000558952 A0A0C4DFX4 3053 aa23.96■■□□□ 1.43
CRNDE-205ENST00000558952 POTEMA6NI47 508 aa23.96■■□□□ 1.43
CRNDE-205ENST00000558952 ZBTB39O15060 712 aa23.96■■□□□ 1.43
CRNDE-205ENST00000558952 CSPG5O95196 566 aa23.96■■□□□ 1.43
CRNDE-205ENST00000558952 OR52Z1P0C646 297 aa23.96■■□□□ 1.43
CRNDE-205ENST00000558952 MCM2P49736 904 aa23.96■■□□□ 1.43
CRNDE-205ENST00000558952 TWF2Q6IBS0 349 aaKnown RBP23.96■■□□□ 1.43
CRNDE-205ENST00000558952 KLHL23Q8NBE8 558 aa23.96■■□□□ 1.43
CRNDE-205ENST00000558952 UHRF1Q96T88 793 aaPredicted RBP23.96■■□□□ 1.43
CRNDE-205ENST00000558952 ANKEF1Q9NU02 776 aa23.96■■□□□ 1.43
CRNDE-205ENST00000558952 PIN4Q9Y237 131 aaKnown RBP23.96■■□□□ 1.43
CRNDE-205ENST00000558952 A0A0U1RQF3 1178 aa23.95■■□□□ 1.42
CRNDE-205ENST00000558952 ASAP2O43150 1006 aa23.95■■□□□ 1.42
CRNDE-205ENST00000558952 EOMESO95936 686 aa23.95■■□□□ 1.42
CRNDE-205ENST00000558952 ITGB1P05556 798 aa23.95■■□□□ 1.42
CRNDE-205ENST00000558952 SRGAP2CP0DJJ0 459 aa23.95■■□□□ 1.42
CRNDE-205ENST00000558952 BMP1P13497 986 aa23.95■■□□□ 1.42
CRNDE-205ENST00000558952 LAMTOR4Q0VGL1 99 aa23.95■■□□□ 1.42
CRNDE-205ENST00000558952 ERMNQ8TAM6 284 aa23.95■■□□□ 1.42
CRNDE-205ENST00000558952 TYW1Q9NV66 732 aaKnown RBP23.95■■□□□ 1.42
CRNDE-205ENST00000558952 DGAT1O75907 488 aa23.94■■□□□ 1.42
CRNDE-205ENST00000558952 SKIP12755 728 aa23.94■■□□□ 1.42
CRNDE-205ENST00000558952 LAG3P18627 525 aa23.94■■□□□ 1.42
CRNDE-205ENST00000558952 KCNA5P22460 613 aa23.94■■□□□ 1.42
CRNDE-205ENST00000558952 TECP42680 631 aa23.94■■□□□ 1.42
CRNDE-205ENST00000558952 CSPP1Q1MSJ5 1256 aa23.94■■□□□ 1.42
CRNDE-205ENST00000558952 EP400NLQ6ZTU2 488 aa23.94■■□□□ 1.42
CRNDE-205ENST00000558952 SRGAP1Q7Z6B7 1085 aa23.94■■□□□ 1.42
CRNDE-205ENST00000558952 LRRC43Q8N309 656 aa23.94■■□□□ 1.42
CRNDE-205ENST00000558952 PPP2R3CQ969Q6 453 aa23.94■■□□□ 1.42
CRNDE-205ENST00000558952 TMX3Q96JJ7 454 aa23.94■■□□□ 1.42
CRNDE-205ENST00000558952 IFT122Q9HBG6 1241 aa23.94■■□□□ 1.42
CRNDE-205ENST00000558952 TUFT1Q9NNX1 390 aa23.94■■□□□ 1.42
CRNDE-205ENST00000558952 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.93■■□□□ 1.42
CRNDE-205ENST00000558952 TNFRSF10AO00220 468 aa23.93■■□□□ 1.42
CRNDE-205ENST00000558952 NCK2O43639 380 aa23.93■■□□□ 1.42
CRNDE-205ENST00000558952 U2AF2P26368 475 aaKnown RBP eCLIP23.93■■□□□ 1.42
CRNDE-205ENST00000558952 MXD4Q14582 209 aaPredicted RBP23.93■■□□□ 1.42
CRNDE-205ENST00000558952 FERMT3Q86UX7 667 aa23.93■■□□□ 1.42
CRNDE-205ENST00000558952 THNSL1Q8IYQ7 743 aa23.93■■□□□ 1.42
CRNDE-205ENST00000558952 RNF149Q8NC42 400 aa23.93■■□□□ 1.42
CRNDE-205ENST00000558952 SPPL3Q8TCT6 385 aa23.93■■□□□ 1.42
CRNDE-205ENST00000558952 PIGOQ8TEQ8 1089 aa23.93■■□□□ 1.42
CRNDE-205ENST00000558952 TBC1D32Q96NH3 1257 aa23.93■■□□□ 1.42
CRNDE-205ENST00000558952 KIAA1671Q9BY89 1806 aa23.93■■□□□ 1.42
CRNDE-205ENST00000558952 XRCC6P12956 609 aaKnown RBP eCLIP23.92■■□□□ 1.42
CRNDE-205ENST00000558952 PHKA2P46019 1235 aa23.92■■□□□ 1.42
CRNDE-205ENST00000558952 RAB27AP51159 221 aa23.92■■□□□ 1.42
CRNDE-205ENST00000558952 TFDP1Q14186 410 aa23.92■■□□□ 1.42
CRNDE-205ENST00000558952 COLGALT1Q8NBJ5 622 aa23.92■■□□□ 1.42
CRNDE-205ENST00000558952 POF1BQ8WVV4 589 aa23.92■■□□□ 1.42
CRNDE-205ENST00000558952 PABPC5Q96DU9 382 aaKnown RBP23.92■■□□□ 1.42
CRNDE-205ENST00000558952 CASD1Q96PB1 797 aa23.92■■□□□ 1.42
CRNDE-205ENST00000558952 TRAIPQ9BWF2 469 aa23.92■■□□□ 1.42
CRNDE-205ENST00000558952 FNDC1Q4ZHG4 1894 aaPredicted RBP23.92■■□□□ 1.42
CRNDE-205ENST00000558952 ARID2Q68CP9 1835 aa23.91■■□□□ 1.42
CRNDE-205ENST00000558952 RARRES1P49788 294 aa23.91■■□□□ 1.42
CRNDE-205ENST00000558952 UBE3AQ05086 875 aa23.91■■□□□ 1.42
CRNDE-205ENST00000558952 ZNF598Q86UK7 904 aaKnown RBP23.91■■□□□ 1.42
CRNDE-205ENST00000558952 HELQQ8TDG4 1101 aa23.91■■□□□ 1.42
CRNDE-205ENST00000558952 MRPL9Q9BYD2 267 aaKnown RBP23.91■■□□□ 1.42
CRNDE-205ENST00000558952 CWH43Q9H720 699 aa23.91■■□□□ 1.42
CRNDE-205ENST00000558952 XPNPEP1Q9NQW7 623 aa23.91■■□□□ 1.42
CRNDE-205ENST00000558952 AGPAT5Q9NUQ2 364 aa23.91■■□□□ 1.42
CRNDE-205ENST00000558952 RNF19AQ9NV58 838 aa23.91■■□□□ 1.42
CRNDE-205ENST00000558952 CLDND1Q9NY35 253 aa23.91■■□□□ 1.42
CRNDE-205ENST00000558952 HCSTQ9UBK5 93 aa23.91■■□□□ 1.42
CRNDE-205ENST00000558952 FGF18O76093 207 aa23.9■■□□□ 1.42
CRNDE-205ENST00000558952 ERLIN2O94905 339 aa23.9■■□□□ 1.42
CRNDE-205ENST00000558952 LEXMQ3ZCV2 418 aa23.9■■□□□ 1.42
CRNDE-205ENST00000558952 CLLU1OSQ5K130 101 aa23.9■■□□□ 1.42
CRNDE-205ENST00000558952 HAUS3Q68CZ6 603 aa23.9■■□□□ 1.42
CRNDE-205ENST00000558952 MCTP1Q6DN14 999 aa23.9■■□□□ 1.42
CRNDE-205ENST00000558952 CATSPER3Q86XQ3 398 aa23.9■■□□□ 1.42
CRNDE-205ENST00000558952 RSPH1Q8WYR4 309 aa23.9■■□□□ 1.42
CRNDE-205ENST00000558952 NACC1Q96RE7 527 aa23.9■■□□□ 1.42
CRNDE-205ENST00000558952 POLR3CQ9BUI4 534 aaPredicted RBP23.9■■□□□ 1.42
CRNDE-205ENST00000558952 FAM105AQ9NUU6 356 aa23.9■■□□□ 1.42
CRNDE-205ENST00000558952 VCANP13611 3396 aa23.89■■□□□ 1.42
CRNDE-205ENST00000558952 H3BQV1 296 aa23.89■■□□□ 1.41
CRNDE-205ENST00000558952 USO1O60763 962 aaKnown RBP23.89■■□□□ 1.41
CRNDE-205ENST00000558952 MED24O75448 989 aa23.89■■□□□ 1.41
CRNDE-205ENST00000558952 CD2BP2O95400 341 aaKnown RBP23.89■■□□□ 1.41
CRNDE-205ENST00000558952 SPATA31C1P0DKV0 1188 aa23.89■■□□□ 1.41
CRNDE-205ENST00000558952 ATF7P17544 494 aaPredicted RBP23.89■■□□□ 1.41
CRNDE-205ENST00000558952 DNAJB1P25685 340 aa23.89■■□□□ 1.41
CRNDE-205ENST00000558952 GJB2P29033 226 aa23.89■■□□□ 1.41
CRNDE-205ENST00000558952 NCBP1Q09161 790 aaKnown RBP23.89■■□□□ 1.41
CRNDE-205ENST00000558952 NBR1Q14596 966 aa23.89■■□□□ 1.41
CRNDE-205ENST00000558952 MICAL1Q8TDZ2 1067 aa23.89■■□□□ 1.41
CRNDE-205ENST00000558952 PGBD4Q96DM1 585 aa23.89■■□□□ 1.41
CRNDE-205ENST00000558952 ZNF558Q96NG5 402 aa23.89■■□□□ 1.41
CRNDE-205ENST00000558952 RAB34Q9BZG1 259 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms