RNA–Protein interactions for RNA: ENST00000558869.1

ALDH1A3-205, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 4

Gene ALDH1A3, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-205ENST00000558869 TPH2Q8IWU9 490 aa16.49■□□□□ 0.23
ALDH1A3-205ENST00000558869 UHRF1Q96T88 793 aaPredicted RBP16.49■□□□□ 0.23
ALDH1A3-205ENST00000558869 TRAIPQ9BWF2 469 aa16.49■□□□□ 0.23
ALDH1A3-205ENST00000558869 TMEM117Q9H0C3 514 aa16.49■□□□□ 0.23
ALDH1A3-205ENST00000558869 ALG13Q9NP73 1137 aaKnown RBP16.49■□□□□ 0.23
ALDH1A3-205ENST00000558869 AAASQ9NRG9 546 aa16.49■□□□□ 0.23
ALDH1A3-205ENST00000558869 COL4A3BPQ9Y5P4 624 aa16.49■□□□□ 0.23
ALDH1A3-205ENST00000558869 BDP1A6H8Y1 2624 aa16.49■□□□□ 0.23
ALDH1A3-205ENST00000558869 NCK2O43639 380 aa16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 CSDE1O75534 798 aaKnown RBP16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 EOMESO95936 686 aa16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 ITGB1P05556 798 aa16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 FGFR1P11362 822 aa16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 FGFR4P22455 802 aa16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 MCM7P33993 719 aa16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 CAMK1Q14012 370 aa16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 EMC2Q15006 297 aa16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 LEXMQ3ZCV2 418 aa16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 XKR9Q5GH70 373 aa16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 ZNF598Q86UK7 904 aaKnown RBP16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 KSR1Q8IVT5 923 aa16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 KLHL23Q8NBE8 558 aa16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 SPPL3Q8TCT6 385 aa16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 TCP11Q8WWU5 503 aa16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 PSPC1Q8WXF1 523 aaKnown RBP16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 PABPC5Q96DU9 382 aaKnown RBP16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 TMEM60Q9H2L4 133 aa16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 IFT122Q9HBG6 1241 aa16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 ANKEF1Q9NU02 776 aa16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 RNF19AQ9NV58 838 aa16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 PCDHB12Q9Y5F1 795 aa16.48■□□□□ 0.23
ALDH1A3-205ENST00000558869 ZBTB39O15060 712 aa16.47■□□□□ 0.23
ALDH1A3-205ENST00000558869 ASAP2O43150 1006 aa16.47■□□□□ 0.23
ALDH1A3-205ENST00000558869 TRAPPC10P48553 1259 aa16.47■□□□□ 0.23
ALDH1A3-205ENST00000558869 UBE3AQ05086 875 aa16.47■□□□□ 0.23
ALDH1A3-205ENST00000558869 CSPP1Q1MSJ5 1256 aa16.47■□□□□ 0.23
ALDH1A3-205ENST00000558869 SRGAP1Q7Z6B7 1085 aa16.47■□□□□ 0.23
ALDH1A3-205ENST00000558869 NOSTRINQ8IVI9 506 aa16.47■□□□□ 0.23
ALDH1A3-205ENST00000558869 PRPF31Q8WWY3 499 aaKnown RBP16.47■□□□□ 0.23
ALDH1A3-205ENST00000558869 RSPH1Q8WYR4 309 aa16.47■□□□□ 0.23
ALDH1A3-205ENST00000558869 NLRP4Q96MN2 994 aa16.47■□□□□ 0.23
ALDH1A3-205ENST00000558869 CASD1Q96PB1 797 aa16.47■□□□□ 0.23
ALDH1A3-205ENST00000558869 TYW1Q9NV66 732 aaKnown RBP16.47■□□□□ 0.23
ALDH1A3-205ENST00000558869 POTEMA6NI47 508 aa16.46■□□□□ 0.23
ALDH1A3-205ENST00000558869 SKIP12755 728 aa16.46■□□□□ 0.23
ALDH1A3-205ENST00000558869 XRCC6P12956 609 aaKnown RBP eCLIP16.46■□□□□ 0.23
ALDH1A3-205ENST00000558869 ATF7P17544 494 aaPredicted RBP16.46■□□□□ 0.23
ALDH1A3-205ENST00000558869 LAG3P18627 525 aa16.46■□□□□ 0.23
ALDH1A3-205ENST00000558869 ATP2B1P20020 1258 aa16.46■□□□□ 0.23
ALDH1A3-205ENST00000558869 KCNA5P22460 613 aa16.46■□□□□ 0.23
ALDH1A3-205ENST00000558869 LAMTOR4Q0VGL1 99 aa16.46■□□□□ 0.23
ALDH1A3-205ENST00000558869 GNL2Q13823 731 aaKnown RBP16.46■□□□□ 0.23
ALDH1A3-205ENST00000558869 SPOUT1Q5T280 376 aaKnown RBP16.46■□□□□ 0.23
ALDH1A3-205ENST00000558869 FERMT3Q86UX7 667 aa16.46■□□□□ 0.23
ALDH1A3-205ENST00000558869 ABI1Q8IZP0 508 aa16.46■□□□□ 0.23
ALDH1A3-205ENST00000558869 LRRC43Q8N309 656 aa16.46■□□□□ 0.23
ALDH1A3-205ENST00000558869 TMEM143Q96AN5 459 aa16.46■□□□□ 0.23
ALDH1A3-205ENST00000558869 TMX3Q96JJ7 454 aa16.46■□□□□ 0.23
ALDH1A3-205ENST00000558869 MTRQ99707 1265 aa16.46■□□□□ 0.23
ALDH1A3-205ENST00000558869 CWH43Q9H720 699 aa16.46■□□□□ 0.23
ALDH1A3-205ENST00000558869 PIN4Q9Y237 131 aaKnown RBP16.46■□□□□ 0.23
ALDH1A3-205ENST00000558869 DGAT1O75907 488 aa16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 CD2BP2O95400 341 aaKnown RBP16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 OR52Z1P0C646 297 aa16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 DNAJB1P25685 340 aa16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 U2AF2P26368 475 aaKnown RBP eCLIP16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 PHKA2P46019 1235 aa16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 RAB27AP51159 221 aa16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 MXD4Q14582 209 aaPredicted RBP16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 CTC1Q2NKJ3 1217 aa16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 PUS10Q3MIT2 529 aaKnown RBP16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 CLLU1OSQ5K130 101 aa16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 TTC38Q5R3I4 469 aa16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 TWF2Q6IBS0 349 aaKnown RBP16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 LRRC55Q6ZSA7 311 aa16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 CATSPER4Q7RTX7 472 aa16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 COLGALT1Q8NBJ5 622 aa16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 POF1BQ8WVV4 589 aa16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 PPP2R3CQ969Q6 453 aa16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 TUFT1Q9NNX1 390 aa16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 XPNPEP1Q9NQW7 623 aa16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 AGPAT5Q9NUQ2 364 aa16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 NOL7Q9UMY1 257 aaKnown RBP16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 KIF3AQ9Y496 699 aa16.45■□□□□ 0.22
ALDH1A3-205ENST00000558869 ZNF623O75123 536 aa16.44■□□□□ 0.22
ALDH1A3-205ENST00000558869 FGF18O76093 207 aa16.44■□□□□ 0.22
ALDH1A3-205ENST00000558869 SRGAP2CP0DJJ0 459 aa16.44■□□□□ 0.22
ALDH1A3-205ENST00000558869 SPATA31C1P0DKV0 1188 aa16.44■□□□□ 0.22
ALDH1A3-205ENST00000558869 RARRES1P49788 294 aa16.44■□□□□ 0.22
ALDH1A3-205ENST00000558869 POU5F1BQ06416 359 aa16.44■□□□□ 0.22
ALDH1A3-205ENST00000558869 HYAL1Q12794 435 aa16.44■□□□□ 0.22
ALDH1A3-205ENST00000558869 PCBP1Q15365 356 aaKnown RBP eCLIP16.44■□□□□ 0.22
ALDH1A3-205ENST00000558869 ZNF174Q15697 407 aa16.44■□□□□ 0.22
ALDH1A3-205ENST00000558869 RNF149Q8NC42 400 aa16.44■□□□□ 0.22
ALDH1A3-205ENST00000558869 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.44■□□□□ 0.22
ALDH1A3-205ENST00000558869 CCDC43Q96MW1 224 aaKnown RBP16.44■□□□□ 0.22
ALDH1A3-205ENST00000558869 NECAB3Q96P71 396 aaPredicted RBP16.44■□□□□ 0.22
ALDH1A3-205ENST00000558869 POLR3CQ9BUI4 534 aaPredicted RBP16.44■□□□□ 0.22
ALDH1A3-205ENST00000558869 MRPL9Q9BYD2 267 aaKnown RBP16.44■□□□□ 0.22
ALDH1A3-205ENST00000558869 BMP2KQ9NSY1 1161 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms