RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 ASGR2P07307 311 aa17.29■□□□□ 0.36
CPNE6-208ENST00000558795 EXOSC10Q01780 885 aaKnown RBP17.29■□□□□ 0.36
CPNE6-208ENST00000558795 KRT32Q14532 448 aa17.29■□□□□ 0.36
CPNE6-208ENST00000558795 ATAT1Q5SQI0 421 aa17.29■□□□□ 0.36
CPNE6-208ENST00000558795 VPS52Q8N1B4 723 aa17.29■□□□□ 0.36
CPNE6-208ENST00000558795 PLCD3Q8N3E9 789 aa17.29■□□□□ 0.36
CPNE6-208ENST00000558795 ZMYND12Q9H0C1 365 aa17.29■□□□□ 0.36
CPNE6-208ENST00000558795 SMOC2Q9H3U7 446 aa17.29■□□□□ 0.36
CPNE6-208ENST00000558795 USP34Q70CQ2 3546 aa17.29■□□□□ 0.36
CPNE6-208ENST00000558795 CCDC196A0A1B0GTZ2 297 aa17.28■□□□□ 0.36
CPNE6-208ENST00000558795 CARNS1A5YM72 827 aa17.28■□□□□ 0.36
CPNE6-208ENST00000558795 ZC3H11AO75152 810 aaKnown RBP eCLIP17.28■□□□□ 0.36
CPNE6-208ENST00000558795 FGFR4P22455 802 aa17.28■□□□□ 0.36
CPNE6-208ENST00000558795 CDC27P30260 824 aa17.28■□□□□ 0.36
CPNE6-208ENST00000558795 RCAN1P53805 252 aa17.28■□□□□ 0.36
CPNE6-208ENST00000558795 FGD1P98174 961 aa17.28■□□□□ 0.36
CPNE6-208ENST00000558795 FOXK2Q01167 660 aa17.28■□□□□ 0.36
CPNE6-208ENST00000558795 PRKCEQ02156 737 aa17.28■□□□□ 0.36
CPNE6-208ENST00000558795 TBC1D8BQ0IIM8 1120 aa17.28■□□□□ 0.36
CPNE6-208ENST00000558795 GIT2Q14161 759 aa17.28■□□□□ 0.36
CPNE6-208ENST00000558795 TSGA10IPQ3SY00 556 aa17.28■□□□□ 0.36
CPNE6-208ENST00000558795 ASTLQ6HA08 431 aaPredicted RBP17.28■□□□□ 0.36
CPNE6-208ENST00000558795 KIAA1841Q6NSI8 718 aa17.28■□□□□ 0.36
CPNE6-208ENST00000558795 ASCL5Q7RTU5 278 aa17.28■□□□□ 0.36
CPNE6-208ENST00000558795 ZNF598Q86UK7 904 aaKnown RBP17.28■□□□□ 0.36
CPNE6-208ENST00000558795 ZDHHC14Q8IZN3 488 aa17.28■□□□□ 0.36
CPNE6-208ENST00000558795 C12orf76Q8N812 135 aaPredicted RBP17.28■□□□□ 0.36
CPNE6-208ENST00000558795 RSPH1Q8WYR4 309 aa17.28■□□□□ 0.36
CPNE6-208ENST00000558795 KCNB2Q92953 911 aa17.28■□□□□ 0.36
CPNE6-208ENST00000558795 DISC1Q9NRI5 854 aa17.28■□□□□ 0.36
CPNE6-208ENST00000558795 FAM217BQ9NTX9 383 aaPredicted RBP17.28■□□□□ 0.36
CPNE6-208ENST00000558795 LIMD1Q9UGP4 676 aa17.28■□□□□ 0.36
CPNE6-208ENST00000558795 PRR23AA6NEV1 266 aa17.27■□□□□ 0.36
CPNE6-208ENST00000558795 SPDYE4A6NLX3 237 aa17.27■□□□□ 0.36
CPNE6-208ENST00000558795 ZNF862O60290 1169 aa17.27■□□□□ 0.36
CPNE6-208ENST00000558795 GNA11P29992 359 aa17.27■□□□□ 0.36
CPNE6-208ENST00000558795 NBL1P41271 181 aa17.27■□□□□ 0.36
CPNE6-208ENST00000558795 AUTS2Q8WXX7 1259 aa17.27■□□□□ 0.36
CPNE6-208ENST00000558795 GCOM2Q9BZD3 368 aaPredicted RBP17.27■□□□□ 0.36
CPNE6-208ENST00000558795 ZBP1Q9H171 429 aa17.27■□□□□ 0.36
CPNE6-208ENST00000558795 USTQ9Y2C2 406 aa17.27■□□□□ 0.36
CPNE6-208ENST00000558795 PTPRZ1P23471 2315 aaPredicted RBP17.27■□□□□ 0.35
CPNE6-208ENST00000558795 CHMP2AO43633 222 aa17.26■□□□□ 0.35
CPNE6-208ENST00000558795 CSDE1O75534 798 aaKnown RBP17.26■□□□□ 0.35
CPNE6-208ENST00000558795 EPCAMP16422 314 aa17.26■□□□□ 0.35
CPNE6-208ENST00000558795 CIITAP33076 1130 aa17.26■□□□□ 0.35
CPNE6-208ENST00000558795 ADD1P35611 737 aaKnown RBP17.26■□□□□ 0.35
CPNE6-208ENST00000558795 POLGP54098 1239 aaPredicted RBP17.26■□□□□ 0.35
CPNE6-208ENST00000558795 CDC42EP1Q00587 391 aa17.26■□□□□ 0.35
CPNE6-208ENST00000558795 TWF2Q6IBS0 349 aaKnown RBP17.26■□□□□ 0.35
CPNE6-208ENST00000558795 GLB1LQ6UWU2 654 aa17.26■□□□□ 0.35
CPNE6-208ENST00000558795 CABP7Q86V35 215 aa17.26■□□□□ 0.35
CPNE6-208ENST00000558795 BICD2Q8TD16 824 aa17.26■□□□□ 0.35
CPNE6-208ENST00000558795 ACSF2Q96CM8 615 aaPredicted RBP17.26■□□□□ 0.35
CPNE6-208ENST00000558795 CHST12Q9NRB3 414 aa17.26■□□□□ 0.35
CPNE6-208ENST00000558795 ADAMTS3O15072 1205 aa17.25■□□□□ 0.35
CPNE6-208ENST00000558795 GAS7O60861 476 aa17.25■□□□□ 0.35
CPNE6-208ENST00000558795 CTSAP10619 480 aa17.25■□□□□ 0.35
CPNE6-208ENST00000558795 SKIP12755 728 aa17.25■□□□□ 0.35
CPNE6-208ENST00000558795 SFPQP23246 707 aaKnown RBP eCLIP17.25■□□□□ 0.35
CPNE6-208ENST00000558795 SFNP31947 248 aa17.25■□□□□ 0.35
CPNE6-208ENST00000558795 PHKA2P46019 1235 aa17.25■□□□□ 0.35
CPNE6-208ENST00000558795 CLCN5P51795 746 aa17.25■□□□□ 0.35
CPNE6-208ENST00000558795 JAK3P52333 1124 aa17.25■□□□□ 0.35
CPNE6-208ENST00000558795 ANAPC15P60006 121 aa17.25■□□□□ 0.35
CPNE6-208ENST00000558795 RNASELQ05823 741 aaKnown RBP17.25■□□□□ 0.35
CPNE6-208ENST00000558795 KANK3Q6NY19 840 aa17.25■□□□□ 0.35
CPNE6-208ENST00000558795 DDX53Q86TM3 631 aaKnown RBP17.25■□□□□ 0.35
CPNE6-208ENST00000558795 TMEM173Q86WV6 379 aaPredicted RBP17.25■□□□□ 0.35
CPNE6-208ENST00000558795 FLCNQ8NFG4 579 aa17.25■□□□□ 0.35
CPNE6-208ENST00000558795 IGSF21Q96ID5 467 aa17.25■□□□□ 0.35
CPNE6-208ENST00000558795 CYP26B1Q9NR63 512 aa17.25■□□□□ 0.35
CPNE6-208ENST00000558795 INPP5FQ9Y2H2 1132 aa17.25■□□□□ 0.35
CPNE6-208ENST00000558795 IRAK3Q9Y616 596 aa17.25■□□□□ 0.35
CPNE6-208ENST00000558795 HMGB1P09429 215 aaKnown RBP17.24■□□□□ 0.35
CPNE6-208ENST00000558795 DNM2P50570 870 aa17.24■□□□□ 0.35
CPNE6-208ENST00000558795 AKAP17AQ02040 695 aaKnown RBP17.24■□□□□ 0.35
CPNE6-208ENST00000558795 UGCGQ16739 394 aa17.24■□□□□ 0.35
CPNE6-208ENST00000558795 ADCK5Q3MIX3 580 aa17.24■□□□□ 0.35
CPNE6-208ENST00000558795 LONRF3Q496Y0 759 aa17.24■□□□□ 0.35
CPNE6-208ENST00000558795 MTERF2Q49AM1 385 aa17.24■□□□□ 0.35
CPNE6-208ENST00000558795 NOMO2Q5JPE7 1267 aa17.24■□□□□ 0.35
CPNE6-208ENST00000558795 TMC5Q6UXY8 1006 aa17.24■□□□□ 0.35
CPNE6-208ENST00000558795 FRMD5Q7Z6J6 570 aa17.24■□□□□ 0.35
CPNE6-208ENST00000558795 PPFIBP1Q86W92 1011 aa17.24■□□□□ 0.35
CPNE6-208ENST00000558795 RASEFQ8IZ41 740 aa17.24■□□□□ 0.35
CPNE6-208ENST00000558795 SLC22A17Q8WUG5 538 aa17.24■□□□□ 0.35
CPNE6-208ENST00000558795 LPPQ93052 612 aa17.24■□□□□ 0.35
CPNE6-208ENST00000558795 NKD2Q969F2 451 aaPredicted RBP17.24■□□□□ 0.35
CPNE6-208ENST00000558795 LENG9Q96B70 501 aa17.24■□□□□ 0.35
CPNE6-208ENST00000558795 RIT2Q99578 217 aa17.24■□□□□ 0.35
CPNE6-208ENST00000558795 TEKT3Q9BXF9 490 aa17.24■□□□□ 0.35
CPNE6-208ENST00000558795 INO80BQ9C086 356 aaPredicted RBP17.24■□□□□ 0.35
CPNE6-208ENST00000558795 SFXN1Q9H9B4 322 aa17.24■□□□□ 0.35
CPNE6-208ENST00000558795 SEPT9Q9UHD8 586 aaPredicted RBP17.24■□□□□ 0.35
CPNE6-208ENST00000558795 PIN4Q9Y237 131 aaKnown RBP17.24■□□□□ 0.35
CPNE6-208ENST00000558795 SNX14Q9Y5W7 946 aa17.24■□□□□ 0.35
CPNE6-208ENST00000558795 DENND4AQ7Z401 1863 aa17.24■□□□□ 0.35
CPNE6-208ENST00000558795 MSH4O15457 936 aa17.23■□□□□ 0.35
CPNE6-208ENST00000558795 PRPF3O43395 683 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms