RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 FNDC1Q4ZHG4 1894 aaPredicted RBP17.32■□□□□ 0.36
CSHL1-208ENST00000558609 A0A0U1RQF3 1178 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 HOXA2O43364 376 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 ST18O60284 1047 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 CSDE1O75534 798 aaKnown RBP17.31■□□□□ 0.36
CSHL1-208ENST00000558609 EOMESO95936 686 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 ITGB1P05556 798 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 FGFR1P11362 822 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 ATP2B1P20020 1258 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 SFPQP23246 707 aaKnown RBP eCLIP17.31■□□□□ 0.36
CSHL1-208ENST00000558609 MCM7P33993 719 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 COL19A1Q14993 1142 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 TCEAL5Q5H9L2 206 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 KLHL23Q8NBE8 558 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 SPPL3Q8TCT6 385 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 PRPF31Q8WWY3 499 aaKnown RBP17.31■□□□□ 0.36
CSHL1-208ENST00000558609 TMEM143Q96AN5 459 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 TRAIPQ9BWF2 469 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 TMEM117Q9H0C3 514 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 IFT122Q9HBG6 1241 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 ALG13Q9NP73 1137 aaKnown RBP17.31■□□□□ 0.36
CSHL1-208ENST00000558609 AAASQ9NRG9 546 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 RNF19AQ9NV58 838 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 TYW1Q9NV66 732 aaKnown RBP17.31■□□□□ 0.36
CSHL1-208ENST00000558609 COL4A3BPQ9Y5P4 624 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 KIAA1671Q9BY89 1806 aa17.31■□□□□ 0.36
CSHL1-208ENST00000558609 NCK2O43639 380 aa17.3■□□□□ 0.36
CSHL1-208ENST00000558609 CAMK1Q14012 370 aa17.3■□□□□ 0.36
CSHL1-208ENST00000558609 EMC2Q15006 297 aa17.3■□□□□ 0.36
CSHL1-208ENST00000558609 ZNF598Q86UK7 904 aaKnown RBP17.3■□□□□ 0.36
CSHL1-208ENST00000558609 NOSTRINQ8IVI9 506 aa17.3■□□□□ 0.36
CSHL1-208ENST00000558609 TCP11Q8WWU5 503 aa17.3■□□□□ 0.36
CSHL1-208ENST00000558609 PSPC1Q8WXF1 523 aaKnown RBP17.3■□□□□ 0.36
CSHL1-208ENST00000558609 NLRP4Q96MN2 994 aa17.3■□□□□ 0.36
CSHL1-208ENST00000558609 CASD1Q96PB1 797 aa17.3■□□□□ 0.36
CSHL1-208ENST00000558609 LRFN3Q9BTN0 628 aa17.3■□□□□ 0.36
CSHL1-208ENST00000558609 ANKEF1Q9NU02 776 aa17.3■□□□□ 0.36
CSHL1-208ENST00000558609 PCDHB12Q9Y5F1 795 aa17.3■□□□□ 0.36
CSHL1-208ENST00000558609 ASAP2O43150 1006 aa17.29■□□□□ 0.36
CSHL1-208ENST00000558609 XRCC6P12956 609 aaKnown RBP eCLIP17.29■□□□□ 0.36
CSHL1-208ENST00000558609 DNAJB1P25685 340 aa17.29■□□□□ 0.36
CSHL1-208ENST00000558609 U2AF2P26368 475 aaKnown RBP eCLIP17.29■□□□□ 0.36
CSHL1-208ENST00000558609 TRAPPC10P48553 1259 aa17.29■□□□□ 0.36
CSHL1-208ENST00000558609 LAMTOR4Q0VGL1 99 aa17.29■□□□□ 0.36
CSHL1-208ENST00000558609 ZNF174Q15697 407 aa17.29■□□□□ 0.36
CSHL1-208ENST00000558609 CSPP1Q1MSJ5 1256 aa17.29■□□□□ 0.36
CSHL1-208ENST00000558609 LEXMQ3ZCV2 418 aa17.29■□□□□ 0.36
CSHL1-208ENST00000558609 SPOUT1Q5T280 376 aaKnown RBP17.29■□□□□ 0.36
CSHL1-208ENST00000558609 SRGAP1Q7Z6B7 1085 aa17.29■□□□□ 0.36
CSHL1-208ENST00000558609 KHSRPQ92945 711 aaKnown RBP eCLIP17.29■□□□□ 0.36
CSHL1-208ENST00000558609 PABPC5Q96DU9 382 aaKnown RBP17.29■□□□□ 0.36
CSHL1-208ENST00000558609 CWH43Q9H720 699 aa17.29■□□□□ 0.36
CSHL1-208ENST00000558609 TCF20Q9UGU0 1960 aaKnown RBP17.29■□□□□ 0.36
CSHL1-208ENST00000558609 POTEMA6NI47 508 aa17.28■□□□□ 0.36
CSHL1-208ENST00000558609 OR52Z1P0C646 297 aa17.28■□□□□ 0.36
CSHL1-208ENST00000558609 SRGAP2CP0DJJ0 459 aa17.28■□□□□ 0.36
CSHL1-208ENST00000558609 SPATA31C1P0DKV0 1188 aa17.28■□□□□ 0.36
CSHL1-208ENST00000558609 ATF7P17544 494 aaPredicted RBP17.28■□□□□ 0.36
CSHL1-208ENST00000558609 KCNA5P22460 613 aa17.28■□□□□ 0.36
CSHL1-208ENST00000558609 PHKA2P46019 1235 aa17.28■□□□□ 0.36
CSHL1-208ENST00000558609 GNL2Q13823 731 aaKnown RBP17.28■□□□□ 0.36
CSHL1-208ENST00000558609 TTC38Q5R3I4 469 aa17.28■□□□□ 0.36
CSHL1-208ENST00000558609 LRRC55Q6ZSA7 311 aa17.28■□□□□ 0.36
CSHL1-208ENST00000558609 CATSPER4Q7RTX7 472 aa17.28■□□□□ 0.36
CSHL1-208ENST00000558609 FERMT3Q86UX7 667 aa17.28■□□□□ 0.36
CSHL1-208ENST00000558609 ABI1Q8IZP0 508 aa17.28■□□□□ 0.36
CSHL1-208ENST00000558609 COLGALT1Q8NBJ5 622 aa17.28■□□□□ 0.36
CSHL1-208ENST00000558609 POF1BQ8WVV4 589 aa17.28■□□□□ 0.36
CSHL1-208ENST00000558609 MTRQ99707 1265 aa17.28■□□□□ 0.36
CSHL1-208ENST00000558609 TUFT1Q9NNX1 390 aa17.28■□□□□ 0.36
CSHL1-208ENST00000558609 XPNPEP1Q9NQW7 623 aa17.28■□□□□ 0.36
CSHL1-208ENST00000558609 ATG2AQ2TAZ0 1938 aa17.27■□□□□ 0.36
CSHL1-208ENST00000558609 ARID2Q68CP9 1835 aa17.27■□□□□ 0.36
CSHL1-208ENST00000558609 DGAT1O75907 488 aa17.27■□□□□ 0.36
CSHL1-208ENST00000558609 SKIP12755 728 aa17.27■□□□□ 0.36
CSHL1-208ENST00000558609 LAG3P18627 525 aa17.27■□□□□ 0.36
CSHL1-208ENST00000558609 RARRES1P49788 294 aa17.27■□□□□ 0.36
CSHL1-208ENST00000558609 UBE3AQ05086 875 aa17.27■□□□□ 0.36
CSHL1-208ENST00000558609 MXD4Q14582 209 aaPredicted RBP17.27■□□□□ 0.36
CSHL1-208ENST00000558609 CLLU1OSQ5K130 101 aa17.27■□□□□ 0.36
CSHL1-208ENST00000558609 TWF2Q6IBS0 349 aaKnown RBP17.27■□□□□ 0.36
CSHL1-208ENST00000558609 RNF169Q8NCN4 708 aa17.27■□□□□ 0.36
CSHL1-208ENST00000558609 RSPH1Q8WYR4 309 aa17.27■□□□□ 0.36
CSHL1-208ENST00000558609 TMX3Q96JJ7 454 aa17.27■□□□□ 0.36
CSHL1-208ENST00000558609 TBC1D32Q96NH3 1257 aa17.27■□□□□ 0.36
CSHL1-208ENST00000558609 C11orf16Q9NQ32 467 aa17.27■□□□□ 0.36
CSHL1-208ENST00000558609 BMP2KQ9NSY1 1161 aaPredicted RBP17.27■□□□□ 0.36
CSHL1-208ENST00000558609 HCSTQ9UBK5 93 aa17.27■□□□□ 0.36
CSHL1-208ENST00000558609 NOL7Q9UMY1 257 aaKnown RBP17.27■□□□□ 0.36
CSHL1-208ENST00000558609 PIN4Q9Y237 131 aaKnown RBP17.27■□□□□ 0.36
CSHL1-208ENST00000558609 KIF3AQ9Y496 699 aa17.27■□□□□ 0.36
CSHL1-208ENST00000558609 ZNF623O75123 536 aa17.26■□□□□ 0.35
CSHL1-208ENST00000558609 FGF18O76093 207 aa17.26■□□□□ 0.35
CSHL1-208ENST00000558609 TECP42680 631 aa17.26■□□□□ 0.35
CSHL1-208ENST00000558609 MCM2P49736 904 aa17.26■□□□□ 0.35
CSHL1-208ENST00000558609 POU5F1BQ06416 359 aa17.26■□□□□ 0.35
CSHL1-208ENST00000558609 HYAL1Q12794 435 aa17.26■□□□□ 0.35
CSHL1-208ENST00000558609 CTC1Q2NKJ3 1217 aa17.26■□□□□ 0.35
CSHL1-208ENST00000558609 CATSPER3Q86XQ3 398 aa17.26■□□□□ 0.35
CSHL1-208ENST00000558609 LRRC43Q8N309 656 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms