RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 RASSF8Q8NHQ8 419 aa13.87□□□□□ -0.19
LRRC28-206ENST00000558471 PHOSPHO2Q8TCD6 241 aa13.87□□□□□ -0.19
LRRC28-206ENST00000558471 LINC01599Q8WXQ3 324 aa13.87□□□□□ -0.19
LRRC28-206ENST00000558471 SLC9A7Q96T83 725 aa13.87□□□□□ -0.19
LRRC28-206ENST00000558471 RUSC1Q9BVN2 902 aa13.87□□□□□ -0.19
LRRC28-206ENST00000558471 FTHL17Q9BXU8 183 aa13.87□□□□□ -0.19
LRRC28-206ENST00000558471 POLR3FQ9H1D9 316 aaPredicted RBP13.87□□□□□ -0.19
LRRC28-206ENST00000558471 BLOC1S4Q9NUP1 217 aa13.87□□□□□ -0.19
LRRC28-206ENST00000558471 PCDHA7Q9UN72 937 aa13.87□□□□□ -0.19
LRRC28-206ENST00000558471 LAMA3Q16787 3333 aa13.86□□□□□ -0.19
LRRC28-206ENST00000558471 MGEA5O60502 916 aa13.86□□□□□ -0.19
LRRC28-206ENST00000558471 CUTAO60888 179 aa13.86□□□□□ -0.19
LRRC28-206ENST00000558471 AMHP03971 560 aa13.86□□□□□ -0.19
LRRC28-206ENST00000558471 SSBP05455 408 aaKnown RBP eCLIP13.86□□□□□ -0.19
LRRC28-206ENST00000558471 PLA2G4BP0C869 781 aa13.86□□□□□ -0.19
LRRC28-206ENST00000558471 NCLP19338 710 aaKnown RBP13.86□□□□□ -0.19
LRRC28-206ENST00000558471 PBX2P40425 430 aa13.86□□□□□ -0.19
LRRC28-206ENST00000558471 RABGGTBP53611 331 aa13.86□□□□□ -0.19
LRRC28-206ENST00000558471 CAPSQ13938 189 aa13.86□□□□□ -0.19
LRRC28-206ENST00000558471 AXDND1Q5T1B0 1012 aaPredicted RBP13.86□□□□□ -0.19
LRRC28-206ENST00000558471 SRGAP1Q7Z6B7 1085 aa13.86□□□□□ -0.19
LRRC28-206ENST00000558471 HERC6Q8IVU3 1022 aa13.86□□□□□ -0.19
LRRC28-206ENST00000558471 KCNG4Q8TDN1 519 aa13.86□□□□□ -0.19
LRRC28-206ENST00000558471 BSNDQ8WZ55 320 aa13.86□□□□□ -0.19
LRRC28-206ENST00000558471 PBX4Q9BYU1 374 aa13.86□□□□□ -0.19
LRRC28-206ENST00000558471 PANK2Q9BZ23 570 aa13.86□□□□□ -0.19
LRRC28-206ENST00000558471 INO80BQ9C086 356 aaPredicted RBP13.86□□□□□ -0.19
LRRC28-206ENST00000558471 MINDY3Q9H8M7 445 aa13.86□□□□□ -0.19
LRRC28-206ENST00000558471 CCDC39Q9UFE4 941 aa13.86□□□□□ -0.19
LRRC28-206ENST00000558471 ATP6V1DQ9Y5K8 247 aa13.86□□□□□ -0.19
LRRC28-206ENST00000558471 LAMA2P24043 3122 aaKnown RBP13.85□□□□□ -0.19
LRRC28-206ENST00000558471 TXLNAP40222 546 aa13.85□□□□□ -0.19
LRRC28-206ENST00000558471 ME1P48163 572 aa13.85□□□□□ -0.19
LRRC28-206ENST00000558471 PTENP60484 403 aa13.85□□□□□ -0.19
LRRC28-206ENST00000558471 KRT85P78386 507 aa13.85□□□□□ -0.19
LRRC28-206ENST00000558471 POU5F1BQ06416 359 aa13.85□□□□□ -0.19
LRRC28-206ENST00000558471 TFDP1Q14186 410 aa13.85□□□□□ -0.19
LRRC28-206ENST00000558471 DHX8Q14562 1220 aaKnown RBP13.85□□□□□ -0.19
LRRC28-206ENST00000558471 MCM6Q14566 821 aa13.85□□□□□ -0.19
LRRC28-206ENST00000558471 DSC3Q14574 896 aa13.85□□□□□ -0.19
LRRC28-206ENST00000558471 SHC4Q6S5L8 630 aa13.85□□□□□ -0.19
LRRC28-206ENST00000558471 MYOCDQ8IZQ8 938 aa13.85□□□□□ -0.19
LRRC28-206ENST00000558471 LEO1Q8WVC0 666 aaPredicted RBP13.85□□□□□ -0.19
LRRC28-206ENST00000558471 RAD54LQ92698 747 aa13.85□□□□□ -0.19
LRRC28-206ENST00000558471 TOP1MTQ969P6 601 aa13.85□□□□□ -0.19
LRRC28-206ENST00000558471 ADAM2Q99965 735 aa13.85□□□□□ -0.19
LRRC28-206ENST00000558471 TSPYL2Q9H2G4 693 aaPredicted RBP13.85□□□□□ -0.19
LRRC28-206ENST00000558471 A0A087X0B3 334 aa13.84□□□□□ -0.19
LRRC28-206ENST00000558471 HIP1RO75146 1068 aa13.84□□□□□ -0.19
LRRC28-206ENST00000558471 UPP2O95045 317 aa13.84□□□□□ -0.19
LRRC28-206ENST00000558471 MYOGP15173 224 aa13.84□□□□□ -0.19
LRRC28-206ENST00000558471 PHKA2P46019 1235 aa13.84□□□□□ -0.19
LRRC28-206ENST00000558471 RAD51AP2Q09MP3 1159 aa13.84□□□□□ -0.19
LRRC28-206ENST00000558471 MAPK7Q13164 816 aa13.84□□□□□ -0.19
LRRC28-206ENST00000558471 NAALADL2Q58DX5 795 aa13.84□□□□□ -0.19
LRRC28-206ENST00000558471 ARSHQ5FYA8 562 aa13.84□□□□□ -0.19
LRRC28-206ENST00000558471 RRAGBQ5VZM2 374 aa13.84□□□□□ -0.19
LRRC28-206ENST00000558471 FAM117BQ6P1L5 589 aa13.84□□□□□ -0.19
LRRC28-206ENST00000558471 FAM43BQ6ZT52 329 aaPredicted RBP13.84□□□□□ -0.19
LRRC28-206ENST00000558471 IFNLR1Q8IU57 520 aaPredicted RBP13.84□□□□□ -0.19
LRRC28-206ENST00000558471 DAW1Q8N136 415 aa13.84□□□□□ -0.19
LRRC28-206ENST00000558471 KIFAP3Q92845 792 aa13.84□□□□□ -0.19
LRRC28-206ENST00000558471 SPATA32Q96LK8 384 aa13.84□□□□□ -0.19
LRRC28-206ENST00000558471 RGS18Q9NS28 235 aa13.84□□□□□ -0.19
LRRC28-206ENST00000558471 YBX2Q9Y2T7 364 aaKnown RBP13.84□□□□□ -0.19
LRRC28-206ENST00000558471 PCDHA11Q9Y5I1 949 aa13.84□□□□□ -0.19
LRRC28-206ENST00000558471 NPHP3-ACAD11A0A0J9YXS1 232 aa13.83□□□□□ -0.2
LRRC28-206ENST00000558471 DENND3A2RUS2 1198 aa13.83□□□□□ -0.2
LRRC28-206ENST00000558471 LRRIQ4A6NIV6 560 aa13.83□□□□□ -0.2
LRRC28-206ENST00000558471 SFI1A8K8P3 1242 aa13.83□□□□□ -0.2
LRRC28-206ENST00000558471 GJB5O95377 273 aa13.83□□□□□ -0.2
LRRC28-206ENST00000558471 ZSCAN20P17040 1043 aaPredicted RBP13.83□□□□□ -0.2
LRRC28-206ENST00000558471 SFPQP23246 707 aaKnown RBP eCLIP13.83□□□□□ -0.2
LRRC28-206ENST00000558471 GUCY2CP25092 1073 aa13.83□□□□□ -0.2
LRRC28-206ENST00000558471 CCDC73Q6ZRK6 1079 aa13.83□□□□□ -0.2
LRRC28-206ENST00000558471 CATSPER4Q7RTX7 472 aa13.83□□□□□ -0.2
LRRC28-206ENST00000558471 CRIPAKQ8N1N5 446 aa13.83□□□□□ -0.2
LRRC28-206ENST00000558471 PDILTQ8N807 584 aa13.83□□□□□ -0.2
LRRC28-206ENST00000558471 LARP4BQ92615 738 aaKnown RBP13.83□□□□□ -0.2
LRRC28-206ENST00000558471 ZBED2Q9BTP6 218 aa13.83□□□□□ -0.2
LRRC28-206ENST00000558471 NFKBIZQ9BYH8 718 aa13.83□□□□□ -0.2
LRRC28-206ENST00000558471 KCND2Q9NZV8 630 aa13.83□□□□□ -0.2
LRRC28-206ENST00000558471 STK17AQ9UEE5 414 aa13.83□□□□□ -0.2
LRRC28-206ENST00000558471 MSRAQ9UJ68 235 aa13.83□□□□□ -0.2
LRRC28-206ENST00000558471 RBM19Q9Y4C8 960 aaKnown RBP13.83□□□□□ -0.2
LRRC28-206ENST00000558471 C9IYK1 514 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 INO80B-WBP1J3KQ70 363 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 TLL1O43897 1013 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 DNAJB2P25686 324 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 NAMPTP43490 491 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 FAM189BP81408 668 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 CACNB1Q02641 598 aaPredicted RBP13.82□□□□□ -0.2
LRRC28-206ENST00000558471 MBTD1Q05BQ5 628 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 PPP2R5AQ15172 486 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 RAB30Q15771 203 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 SLC24A5Q71RS6 500 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 GPBP1Q86WP2 473 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 TIFAQ96CG3 184 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 IFT74Q96LB3 600 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 DRC1Q96MC2 740 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms