RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 GPRC5CQ9NQ84 441 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 ZDHHC9Q9Y397 364 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 PCDHA11Q9Y5I1 949 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 CDH23Q9H251 3354 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 DENND3A2RUS2 1198 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 MGEA5O60502 916 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 GJB5O95377 273 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 SSBP05455 408 aaKnown RBP eCLIP13.71□□□□□ -0.21
SMAD3-205ENST00000558428 MYOGP15173 224 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 SFPQP23246 707 aaKnown RBP eCLIP13.71□□□□□ -0.21
SMAD3-205ENST00000558428 GLRA2P23416 452 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 TXLNAP40222 546 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 DNM1Q05193 864 aaKnown RBP13.71□□□□□ -0.21
SMAD3-205ENST00000558428 CAPSQ13938 189 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 TFDP1Q14186 410 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 KARSQ15046 597 aaKnown RBP13.71□□□□□ -0.21
SMAD3-205ENST00000558428 ZNF697Q5TEC3 545 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 ATL3Q6DD88 541 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 FAM43BQ6ZT52 329 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-205ENST00000558428 USP49Q70CQ1 688 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 SRGAP1Q7Z6B7 1085 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 RTN4RL1Q86UN2 441 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-205ENST00000558428 SYMPKQ92797 1274 aaKnown RBP13.71□□□□□ -0.21
SMAD3-205ENST00000558428 TOP1MTQ969P6 601 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 EPSTI1Q96J88 318 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 ADAM2Q99965 735 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 CCSER1Q9C0I3 900 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 TSPYL2Q9H2G4 693 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-205ENST00000558428 NKX2-4Q9H2Z4 354 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 IFT122Q9HBG6 1241 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 CFAP45Q9UL16 551 aa13.71□□□□□ -0.21
SMAD3-205ENST00000558428 YBX2Q9Y2T7 364 aaKnown RBP13.71□□□□□ -0.21
SMAD3-205ENST00000558428 PPP6R2O75170 966 aa13.7□□□□□ -0.22
SMAD3-205ENST00000558428 PLA2G4BP0C869 781 aa13.7□□□□□ -0.22
SMAD3-205ENST00000558428 ZSCAN20P17040 1043 aaPredicted RBP13.7□□□□□ -0.22
SMAD3-205ENST00000558428 PLCG1P19174 1290 aa13.7□□□□□ -0.22
SMAD3-205ENST00000558428 IBSPP21815 317 aaPredicted RBP13.7□□□□□ -0.22
SMAD3-205ENST00000558428 PHKA2P46019 1235 aa13.7□□□□□ -0.22
SMAD3-205ENST00000558428 RINT1Q6NUQ1 792 aa13.7□□□□□ -0.22
SMAD3-205ENST00000558428 CATSPER4Q7RTX7 472 aa13.7□□□□□ -0.22
SMAD3-205ENST00000558428 SYT2Q8N9I0 419 aaPredicted RBP13.7□□□□□ -0.22
SMAD3-205ENST00000558428 RAD9AQ99638 391 aa13.7□□□□□ -0.22
SMAD3-205ENST00000558428 RUSC1Q9BVN2 902 aa13.7□□□□□ -0.22
SMAD3-205ENST00000558428 TMEM265A0A087WTH1 108 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 LRRIQ4A6NIV6 560 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 CA3P07451 260 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 NCLP19338 710 aaKnown RBP13.69□□□□□ -0.22
SMAD3-205ENST00000558428 ANP32AP39687 249 aaKnown RBP13.69□□□□□ -0.22
SMAD3-205ENST00000558428 SLC12A3P55017 1021 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 PTENP60484 403 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 POU5F1BQ06416 359 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 DSC3Q14574 896 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 C1orf186Q6ZWK4 172 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 Q7L0L9 218 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 DEFB123Q8N688 67 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 KCNG4Q8TDN1 519 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 KIFAP3Q92845 792 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 FAM161BQ96MY7 647 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 YME1L1Q96TA2 773 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 MINDY3Q9H8M7 445 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 SLC28A3Q9HAS3 691 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 POLD4Q9HCU8 107 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 RGS18Q9NS28 235 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 C1orf112Q9NSG2 853 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 CCDC39Q9UFE4 941 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 PIN4Q9Y237 131 aaKnown RBP13.69□□□□□ -0.22
SMAD3-205ENST00000558428 ATP6V1DQ9Y5K8 247 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 CHD7Q9P2D1 2997 aa13.69□□□□□ -0.22
SMAD3-205ENST00000558428 CHD9Q3L8U1 2897 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 LCHNA4D1U4 455 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 INO80B-WBP1J3KQ70 363 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 CUTAO60888 179 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 ERLIN2O94905 339 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 STAG3L1P0CL83 205 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 ME1P48163 572 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 SARSP49591 514 aaKnown RBP13.68□□□□□ -0.22
SMAD3-205ENST00000558428 KRT85P78386 507 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 NUCB2P80303 420 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 HTRA4P83105 476 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-205ENST00000558428 DHX8Q14562 1220 aaKnown RBP13.68□□□□□ -0.22
SMAD3-205ENST00000558428 MCM6Q14566 821 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 PPP2R5AQ15172 486 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 PPP2R2DQ66LE6 453 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 SLC24A5Q71RS6 500 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 IFNLR1Q8IU57 520 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-205ENST00000558428 NPAS4Q8IUM7 802 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 LRRC15Q8TF66 581 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 BSNDQ8WZ55 320 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 RAD54LQ92698 747 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 IFT74Q96LB3 600 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 TTYH1Q9H313 450 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-205ENST00000558428 ZNF576Q9H609 170 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 BLOC1S4Q9NUP1 217 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 LRFN2Q9ULH4 789 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 INSL6Q9Y581 213 aa13.68□□□□□ -0.22
SMAD3-205ENST00000558428 C9IYK1 514 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 HIP1RO75146 1068 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 GUCY2CP25092 1073 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 NAMPTP43490 491 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 RAD51AP2Q09MP3 1159 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms