RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 SMARCE1Q969G3 411 aa8.03□□□□□ -1.12
MARK3-212ENST00000558223 PNMA5Q96PV4 448 aa8.03□□□□□ -1.12
MARK3-212ENST00000558223 GSDMAQ96QA5 445 aa8.03□□□□□ -1.12
MARK3-212ENST00000558223 MYL10Q9BUA6 226 aa8.03□□□□□ -1.12
MARK3-212ENST00000558223 FTOQ9C0B1 505 aaKnown RBP eCLIP8.03□□□□□ -1.12
MARK3-212ENST00000558223 ZC3H12CQ9C0D7 883 aaKnown RBP8.03□□□□□ -1.12
MARK3-212ENST00000558223 OSBPL5Q9H0X9 879 aaPredicted RBP8.03□□□□□ -1.12
MARK3-212ENST00000558223 GLT8D2Q9H1C3 349 aa8.03□□□□□ -1.12
MARK3-212ENST00000558223 MAGEF1Q9HAY2 307 aa8.03□□□□□ -1.12
MARK3-212ENST00000558223 CABP5Q9NP86 173 aa8.03□□□□□ -1.12
MARK3-212ENST00000558223 MAN1C1Q9NR34 630 aa8.03□□□□□ -1.12
MARK3-212ENST00000558223 ARHGEF4Q9NR80 690 aa8.03□□□□□ -1.12
MARK3-212ENST00000558223 RMND1Q9NWS8 449 aa8.03□□□□□ -1.12
MARK3-212ENST00000558223 SUCOQ9UBS9 1254 aaKnown RBP8.03□□□□□ -1.12
MARK3-212ENST00000558223 FBXO2Q9UK22 296 aaPredicted RBP8.03□□□□□ -1.12
MARK3-212ENST00000558223 ANKRD6Q9Y2G4 727 aa8.03□□□□□ -1.12
MARK3-212ENST00000558223 ATP6V0A2Q9Y487 856 aa8.03□□□□□ -1.12
MARK3-212ENST00000558223 PAXBP1Q9Y5B6 917 aa8.03□□□□□ -1.12
MARK3-212ENST00000558223 C4AP0C0L4 1744 aa8.03□□□□□ -1.12
MARK3-212ENST00000558223 GAKO14976 1311 aa8.03□□□□□ -1.12
MARK3-212ENST00000558223 CACNA1SQ13698 1873 aa8.02□□□□□ -1.12
MARK3-212ENST00000558223 MAST2Q6P0Q8 1798 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 DYTNA2CJ06 578 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 POLRMTO00411 1230 aaKnown RBP8.02□□□□□ -1.13
MARK3-212ENST00000558223 ZEB2O60315 1214 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 MMP20O60882 483 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 NBNO60934 754 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 PPFIA3O75145 1194 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 TRPA1O75762 1119 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 PGRP06401 933 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 SLFN14P0C7P3 912 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 PF4V1P10720 104 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 NAT2P11245 290 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 TOP1P11387 765 aaKnown RBP8.02□□□□□ -1.13
MARK3-212ENST00000558223 ACPPP15309 386 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 LONP1P36776 959 aaKnown RBP8.02□□□□□ -1.13
MARK3-212ENST00000558223 NOVP48745 357 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 GPSM2P81274 684 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 HYAL2Q12891 473 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 BIRC3Q13489 604 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 POSTNQ15063 836 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 GNPTABQ3T906 1256 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 TTC38Q5R3I4 469 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 YOD1Q5VVQ6 348 aaPredicted RBP8.02□□□□□ -1.13
MARK3-212ENST00000558223 ICE2Q659A1 982 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 MCTP2Q6DN12 878 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 CCDC186Q7Z3E2 898 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 RAB11FIP4Q86YS3 637 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 DHX40Q8IX18 779 aaKnown RBP8.02□□□□□ -1.13
MARK3-212ENST00000558223 TBC1D16Q8TBP0 767 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 ZNF384Q8TF68 577 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 GJA10Q969M2 543 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 AIFM3Q96NN9 605 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 CTAGE1Q96RT6 745 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 SPZ1Q9BXG8 430 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 CUEDC2Q9H467 287 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 INCENPQ9NQS7 918 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 ZFATQ9P243 1243 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 APOBEC2Q9Y235 224 aaKnown RBP8.02□□□□□ -1.13
MARK3-212ENST00000558223 TNPO3Q9Y5L0 923 aaKnown RBP8.02□□□□□ -1.13
MARK3-212ENST00000558223 TACC3Q9Y6A5 838 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 FRMPD2Q68DX3 1309 aaPredicted RBP8.02□□□□□ -1.13
MARK3-212ENST00000558223 CNTNAP5Q8WYK1 1306 aa8.02□□□□□ -1.13
MARK3-212ENST00000558223 ESYT2A0FGR8 921 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 PRRT4C9JH25 899 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 ASLP04424 464 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 CYP2C19P33261 490 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 GUCY1A2P33402 732 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 PRPHP41219 470 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 BTDP43251 543 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 TOB1P50616 345 aaPredicted RBP8.01□□□□□ -1.13
MARK3-212ENST00000558223 KCNQ4P56696 695 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 ZNF280AP59817 542 aaPredicted RBP8.01□□□□□ -1.13
MARK3-212ENST00000558223 ATP2C1P98194 919 aaPredicted RBP8.01□□□□□ -1.13
MARK3-212ENST00000558223 SIM2Q14190 667 aaPredicted RBP8.01□□□□□ -1.13
MARK3-212ENST00000558223 GBX1Q14549 363 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 SEPT7Q16181 437 aaKnown RBP8.01□□□□□ -1.13
MARK3-212ENST00000558223 TXNRD1Q16881 649 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 ABCB5Q2M3G0 1257 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 MFSD14BQ5SR56 506 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 HHIPL2Q6UWX4 724 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 C11orf57Q6ZUT1 292 aaPredicted RBP8.01□□□□□ -1.13
MARK3-212ENST00000558223 LRRC8AQ8IWT6 810 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 TEX11Q8IYF3 940 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 BLIDQ8IZY5 108 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 AOPEPQ8N6M6 819 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 OR2W6PQ8NHA6 318 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 SPATA20Q8TB22 786 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 CCDC47Q96A33 483 aaKnown RBP8.01□□□□□ -1.13
MARK3-212ENST00000558223 MASTLQ96GX5 879 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 CCDC17Q96LX7 622 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 AK8Q96MA6 479 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 GPR101Q96P66 508 aaPredicted RBP8.01□□□□□ -1.13
MARK3-212ENST00000558223 EMILIN2Q9BXX0 1053 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 DHX36Q9H2U1 1008 aaKnown RBP8.01□□□□□ -1.13
MARK3-212ENST00000558223 C6orf50Q9HD87 102 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 BRD7Q9NPI1 651 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 LRRC4BQ9NT99 713 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 NDOR1Q9UHB4 597 aa8.01□□□□□ -1.13
MARK3-212ENST00000558223 PCDHA4Q9UN74 947 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms