RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 CERS4Q9HA82 394 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 ERVK-5Q9HDB9 667 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 C1orf112Q9NSG2 853 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 CCDC39Q9UFE4 941 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 MTUS1Q9ULD2 1270 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 INSL6Q9Y581 213 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.96□□□□□ -0.82
SPG11-207ENST00000558138 EYA4O95677 639 aa9.96□□□□□ -0.82
SPG11-207ENST00000558138 FOSL2P15408 326 aa9.96□□□□□ -0.82
SPG11-207ENST00000558138 IGFBP4P22692 258 aa9.96□□□□□ -0.82
SPG11-207ENST00000558138 SARSP49591 514 aaKnown RBP9.96□□□□□ -0.82
SPG11-207ENST00000558138 MKRN4PQ13434 485 aaPredicted RBP9.96□□□□□ -0.82
SPG11-207ENST00000558138 BTG3Q14201 252 aaPredicted RBP9.96□□□□□ -0.82
SPG11-207ENST00000558138 ECM1Q16610 540 aa9.96□□□□□ -0.82
SPG11-207ENST00000558138 PAN2Q504Q3 1202 aaKnown RBP9.96□□□□□ -0.82
SPG11-207ENST00000558138 SPECC1Q5M775 1068 aa9.96□□□□□ -0.82
SPG11-207ENST00000558138 SRGAP1Q7Z6B7 1085 aa9.96□□□□□ -0.82
SPG11-207ENST00000558138 NPAS4Q8IUM7 802 aa9.96□□□□□ -0.82
SPG11-207ENST00000558138 ABI1Q8IZP0 508 aa9.96□□□□□ -0.82
SPG11-207ENST00000558138 TOP1MTQ969P6 601 aa9.96□□□□□ -0.82
SPG11-207ENST00000558138 USP28Q96RU2 1077 aa9.96□□□□□ -0.82
SPG11-207ENST00000558138 CEP89Q96ST8 783 aa9.96□□□□□ -0.82
SPG11-207ENST00000558138 CSRNP2Q9H175 543 aa9.96□□□□□ -0.82
SPG11-207ENST00000558138 SEMA6BQ9H3T3 888 aa9.96□□□□□ -0.82
SPG11-207ENST00000558138 GPRC5CQ9NQ84 441 aa9.96□□□□□ -0.82
SPG11-207ENST00000558138 DACT1Q9NYF0 836 aa9.96□□□□□ -0.82
SPG11-207ENST00000558138 TFIP11Q9UBB9 837 aaKnown RBP9.96□□□□□ -0.82
SPG11-207ENST00000558138 LCHNA4D1U4 455 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 CCDC169A6NNP5 214 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 SPTLC2O15270 562 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 CYP11B2P19099 503 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 ANP32AP39687 249 aaKnown RBP9.95□□□□□ -0.82
SPG11-207ENST00000558138 RAD51AP2Q09MP3 1159 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 CAPSQ13938 189 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 KARSQ15046 597 aaKnown RBP9.95□□□□□ -0.82
SPG11-207ENST00000558138 PPP2R5AQ15172 486 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 TPRNQ4KMQ1 711 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 SLC24A5Q71RS6 500 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 MICALL1Q8N3F8 863 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 FIBCD1Q8N539 461 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 KRI1Q8N9T8 703 aaKnown RBP9.95□□□□□ -0.82
SPG11-207ENST00000558138 ASAP3Q8TDY4 903 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 LINC01599Q8WXQ3 324 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 MYLIPQ8WY64 445 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 KIFAP3Q92845 792 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 TRIM6Q9C030 488 aaPredicted RBP9.95□□□□□ -0.82
SPG11-207ENST00000558138 C2orf40Q9H1Z8 148 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 TSPYL2Q9H2G4 693 aaPredicted RBP9.95□□□□□ -0.82
SPG11-207ENST00000558138 TTYH1Q9H313 450 aaPredicted RBP9.95□□□□□ -0.82
SPG11-207ENST00000558138 TMX1Q9H3N1 280 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 ZHX3Q9H4I2 956 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 PRDM12Q9H4Q4 367 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 XPNPEP1Q9NQW7 623 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 RGS18Q9NS28 235 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 CFAP45Q9UL16 551 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 ATP6V1DQ9Y5K8 247 aa9.95□□□□□ -0.82
SPG11-207ENST00000558138 RANBP2P49792 3224 aaKnown RBP9.95□□□□□ -0.82
SPG11-207ENST00000558138 MYH15Q9Y2K3 1946 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 ADGRA3Q8IWK6 1321 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 TBKBP1A7MCY6 615 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 HOXA2O43364 376 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 GTPBP6O43824 516 aaPredicted RBP9.94□□□□□ -0.82
SPG11-207ENST00000558138 MGEA5O60502 916 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 CSPG5O95196 566 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 PLA2G4BP0C869 781 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 SKIP12755 728 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 PLCG1P19174 1290 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 GLRA2P23416 452 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 CTNNB1P35222 781 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 ME1P48163 572 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 GRIN1Q05586 938 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 DMP1Q13316 513 aaPredicted RBP9.94□□□□□ -0.82
SPG11-207ENST00000558138 PKP1Q13835 747 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 GRIN2CQ14957 1233 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 PTPAQ15257 358 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 FAM43BQ6ZT52 329 aaPredicted RBP9.94□□□□□ -0.82
SPG11-207ENST00000558138 GPBP1Q86WP2 473 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 SYMPKQ92797 1274 aaKnown RBP9.94□□□□□ -0.82
SPG11-207ENST00000558138 DRC1Q96MC2 740 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 CLIC6Q96NY7 704 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 TGS1Q96RS0 853 aaKnown RBP9.94□□□□□ -0.82
SPG11-207ENST00000558138 CDX2Q99626 313 aaPredicted RBP9.94□□□□□ -0.82
SPG11-207ENST00000558138 POLD4Q9HCU8 107 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 CHST12Q9NRB3 414 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 SRPRBQ9Y5M8 271 aaKnown RBP9.94□□□□□ -0.82
SPG11-207ENST00000558138 PTPRSQ13332 1948 aa9.94□□□□□ -0.82
SPG11-207ENST00000558138 SLC26A4O43511 780 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 HIP1RO75146 1068 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 TBCAO75347 108 aaKnown RBP9.93□□□□□ -0.82
SPG11-207ENST00000558138 YEATS4O95619 227 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 ARL2P36404 184 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 STAT6P42226 847 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 NAMPTP43490 491 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 RAB27AP51159 221 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 TAP1Q03518 808 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 DNM1Q05193 864 aaKnown RBP9.93□□□□□ -0.82
SPG11-207ENST00000558138 GRB10Q13322 594 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 SLC39A14Q15043 492 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 LONRF3Q496Y0 759 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 TMEM119Q4V9L6 283 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms