RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 KLC2Q9H0B6 622 aa4.75□□□□□ -1.65
SPG11-206ENST00000558093 SEMA4AQ9H3S1 761 aa4.75□□□□□ -1.65
SPG11-206ENST00000558093 MSL2Q9HCI7 577 aa4.75□□□□□ -1.65
SPG11-206ENST00000558093 USP18Q9UMW8 372 aa4.75□□□□□ -1.65
SPG11-206ENST00000558093 CTDP1Q9Y5B0 961 aaPredicted RBP4.75□□□□□ -1.65
SPG11-206ENST00000558093 PCDHB6Q9Y5E3 794 aa4.75□□□□□ -1.65
SPG11-206ENST00000558093 MYPNQ86TC9 1320 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 A0A0A6YYJ9 748 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 LCHNA4D1U4 455 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 MATN2O00339 956 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 ELL2O00472 640 aaPredicted RBP4.74□□□□□ -1.65
SPG11-206ENST00000558093 NEMP1O14524 444 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 ZEB2O60315 1214 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 ULK1O75385 1050 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 RAD17O75943 681 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 BPIP17213 487 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 ATP2C1P98194 919 aaPredicted RBP4.74□□□□□ -1.65
SPG11-206ENST00000558093 HGFACQ04756 655 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 RIN1Q13671 783 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 MAN2A1Q16706 1144 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 ZBTB41Q5SVQ8 909 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 POLNQ7Z5Q5 900 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 CXorf67Q86X51 503 aaPredicted RBP4.74□□□□□ -1.65
SPG11-206ENST00000558093 ANKRD53Q8N9V6 530 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 DNERQ8NFT8 737 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 Q8TCH9 128 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 CFHR4Q92496 578 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 TMEM176AQ96HP8 235 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 ZNF496Q96IT1 587 aaPredicted RBP4.74□□□□□ -1.65
SPG11-206ENST00000558093 RPL10LQ96L21 214 aaKnown RBP4.74□□□□□ -1.65
SPG11-206ENST00000558093 ADOQ96SZ5 270 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 SLC6A15Q9H2J7 730 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 NELFAQ9H3P2 528 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 C14orf93Q9H972 538 aaKnown RBP4.74□□□□□ -1.65
SPG11-206ENST00000558093 NCDNQ9UBB6 729 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 RCAN3Q9UKA8 241 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 PRKAB1Q9Y478 270 aa4.74□□□□□ -1.65
SPG11-206ENST00000558093 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.73□□□□□ -1.65
SPG11-206ENST00000558093 NRP2O60462 931 aa4.73□□□□□ -1.65
SPG11-206ENST00000558093 BRINP1O60477 761 aa4.73□□□□□ -1.65
SPG11-206ENST00000558093 FSBPO95073 299 aa4.73□□□□□ -1.65
SPG11-206ENST00000558093 HNRNPLP14866 589 aaKnown RBP eCLIP4.73□□□□□ -1.65
SPG11-206ENST00000558093 MSX2P35548 267 aaPredicted RBP4.73□□□□□ -1.65
SPG11-206ENST00000558093 ID4P47928 161 aa4.73□□□□□ -1.65
SPG11-206ENST00000558093 NFKB2Q00653 900 aa4.73□□□□□ -1.65
SPG11-206ENST00000558093 HHEXQ03014 270 aa4.73□□□□□ -1.65
SPG11-206ENST00000558093 PPARAQ07869 468 aa4.73□□□□□ -1.65
SPG11-206ENST00000558093 CCDC62Q6P9F0 684 aa4.73□□□□□ -1.65
SPG11-206ENST00000558093 PLA2G15Q8NCC3 412 aa4.73□□□□□ -1.65
SPG11-206ENST00000558093 NKD2Q969F2 451 aaPredicted RBP4.73□□□□□ -1.65
SPG11-206ENST00000558093 ANO3Q9BYT9 981 aa4.73□□□□□ -1.65
SPG11-206ENST00000558093 CD248Q9HCU0 757 aa4.73□□□□□ -1.65
SPG11-206ENST00000558093 PPP2R3BQ9Y5P8 575 aa4.73□□□□□ -1.65
SPG11-206ENST00000558093 SLC30A1Q9Y6M5 507 aa4.73□□□□□ -1.65
SPG11-206ENST00000558093 C2orf78A6NCI8 922 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 TOX4O94842 621 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 CLEC2LP0C7M8 214 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 INSRRP14616 1297 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 MANFP55145 182 aaKnown RBP4.72□□□□□ -1.65
SPG11-206ENST00000558093 NRG3P56975 720 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 SESN3P58005 492 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 TMPRSS15P98073 1019 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 GRM7Q14831 915 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 ACAP1Q15027 740 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 PRKD1Q15139 912 aaPredicted RBP4.72□□□□□ -1.65
SPG11-206ENST00000558093 IQSEC1Q6DN90 963 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 LMBR1LQ6UX01 489 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 DBX2Q6ZNG2 339 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 STRA8Q7Z7C7 330 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 CLEC14AQ86T13 490 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 RASSF3Q86WH2 238 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 D2HGDHQ8N465 521 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 GAB3Q8WWW8 586 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 RABGGTAQ92696 567 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 FAM89AQ96GI7 184 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 C1QTNF3Q9BXJ4 246 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 HAPLN2Q9GZV7 340 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 TMX1Q9H3N1 280 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 PLA2G3Q9NZ20 509 aa4.72□□□□□ -1.65
SPG11-206ENST00000558093 PRSS38A1L453 326 aa4.71□□□□□ -1.66
SPG11-206ENST00000558093 PMS2P1A4D2B8 440 aa4.71□□□□□ -1.66
SPG11-206ENST00000558093 JUNP05412 331 aaKnown RBP4.71□□□□□ -1.66
SPG11-206ENST00000558093 PFKMP08237 780 aa4.71□□□□□ -1.66
SPG11-206ENST00000558093 VSIG10L2P0DP72 767 aa4.71□□□□□ -1.66
SPG11-206ENST00000558093 ACO1P21399 889 aaKnown RBP4.71□□□□□ -1.66
SPG11-206ENST00000558093 ADCY7P51828 1080 aa4.71□□□□□ -1.66
SPG11-206ENST00000558093 PUM1Q14671 1186 aaKnown RBP eCLIP4.71□□□□□ -1.66
SPG11-206ENST00000558093 GAGE13Q4V321 117 aa4.71□□□□□ -1.66
SPG11-206ENST00000558093 RNF187Q5TA31 235 aaPredicted RBP4.71□□□□□ -1.66
SPG11-206ENST00000558093 EGFLAMQ63HQ2 1017 aa4.71□□□□□ -1.66
SPG11-206ENST00000558093 GLB1L2Q8IW92 636 aa4.71□□□□□ -1.66
SPG11-206ENST00000558093 GPR135Q8IZ08 494 aa4.71□□□□□ -1.66
SPG11-206ENST00000558093 CLRN3Q8NCR9 226 aa4.71□□□□□ -1.66
SPG11-206ENST00000558093 ATL2Q8NHH9 583 aa4.71□□□□□ -1.66
SPG11-206ENST00000558093 ARL8AQ96BM9 186 aa4.71□□□□□ -1.66
SPG11-206ENST00000558093 KRTAP3-1Q9BYR8 98 aa4.71□□□□□ -1.66
SPG11-206ENST00000558093 OSBPL6Q9BZF3 934 aa4.71□□□□□ -1.66
SPG11-206ENST00000558093 WNT8AQ9H1J5 351 aa4.71□□□□□ -1.66
SPG11-206ENST00000558093 IL23AQ9NPF7 189 aa4.71□□□□□ -1.66
SPG11-206ENST00000558093 TSC22D4Q9Y3Q8 395 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms