RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 MAPK7Q13164 816 aa23.53■■□□□ 1.36
CASC4-204ENST00000557945 RNF149Q8NC42 400 aa23.53■■□□□ 1.36
CASC4-204ENST00000557945 FDXACB1Q9BRP7 624 aaPredicted RBP23.53■■□□□ 1.36
CASC4-204ENST00000557945 BLZF1Q9H2G9 400 aa23.53■■□□□ 1.36
CASC4-204ENST00000557945 ADAMTS10Q9H324 1103 aa23.53■■□□□ 1.36
CASC4-204ENST00000557945 LRRIQ4A6NIV6 560 aa23.52■■□□□ 1.36
CASC4-204ENST00000557945 MLLT1Q03111 559 aaPredicted RBP23.52■■□□□ 1.36
CASC4-204ENST00000557945 CAPSQ13938 189 aa23.52■■□□□ 1.36
CASC4-204ENST00000557945 PPP2R5AQ15172 486 aa23.52■■□□□ 1.36
CASC4-204ENST00000557945 MFSD5Q6N075 450 aa23.52■■□□□ 1.36
CASC4-204ENST00000557945 KANK3Q6NY19 840 aa23.52■■□□□ 1.36
CASC4-204ENST00000557945 ZNF410Q86VK4 478 aa23.52■■□□□ 1.36
CASC4-204ENST00000557945 TMEM199Q8N511 208 aa23.52■■□□□ 1.36
CASC4-204ENST00000557945 BSNDQ8WZ55 320 aa23.52■■□□□ 1.36
CASC4-204ENST00000557945 BADQ92934 168 aa23.52■■□□□ 1.36
CASC4-204ENST00000557945 C7orf25Q9BPX7 421 aa23.52■■□□□ 1.36
CASC4-204ENST00000557945 TRIM9Q9C026 710 aa23.52■■□□□ 1.36
CASC4-204ENST00000557945 DACT1Q9NYF0 836 aa23.52■■□□□ 1.36
CASC4-204ENST00000557945 CCDC169A6NNP5 214 aa23.52■■□□□ 1.36
CASC4-204ENST00000557945 CASP1P29466 404 aa23.52■■□□□ 1.36
CASC4-204ENST00000557945 PEX3P56589 373 aa23.52■■□□□ 1.36
CASC4-204ENST00000557945 ASIC1P78348 528 aa23.52■■□□□ 1.36
CASC4-204ENST00000557945 MYCT1Q8N699 235 aa23.52■■□□□ 1.36
CASC4-204ENST00000557945 DNAJC19Q96DA6 116 aa23.52■■□□□ 1.36
CASC4-204ENST00000557945 LBHD1Q9BQE6 289 aaPredicted RBP23.52■■□□□ 1.36
CASC4-204ENST00000557945 GCOM2Q9BZD3 368 aaPredicted RBP23.52■■□□□ 1.36
CASC4-204ENST00000557945 PARVGQ9HBI0 331 aa23.52■■□□□ 1.36
CASC4-204ENST00000557945 GHRP10912 638 aa23.51■■□□□ 1.35
CASC4-204ENST00000557945 PLS3P13797 630 aa23.51■■□□□ 1.35
CASC4-204ENST00000557945 NAMPTP43490 491 aa23.51■■□□□ 1.35
CASC4-204ENST00000557945 PHKA2P46019 1235 aa23.51■■□□□ 1.35
CASC4-204ENST00000557945 DMP1Q13316 513 aaPredicted RBP23.51■■□□□ 1.35
CASC4-204ENST00000557945 CUL4BQ13620 913 aa23.51■■□□□ 1.35
CASC4-204ENST00000557945 MBTPS1Q14703 1052 aa23.51■■□□□ 1.35
CASC4-204ENST00000557945 DEFB128Q7Z7B8 93 aa23.51■■□□□ 1.35
CASC4-204ENST00000557945 DEPTORQ8TB45 409 aa23.51■■□□□ 1.35
CASC4-204ENST00000557945 TIGD1Q96MW7 591 aa23.51■■□□□ 1.35
CASC4-204ENST00000557945 C17orf75Q9HAS0 396 aa23.51■■□□□ 1.35
CASC4-204ENST00000557945 LARSQ9P2J5 1176 aaKnown RBP23.51■■□□□ 1.35
CASC4-204ENST00000557945 GTPBP6O43824 516 aaPredicted RBP23.5■■□□□ 1.35
CASC4-204ENST00000557945 PARNO95453 639 aaKnown RBP23.5■■□□□ 1.35
CASC4-204ENST00000557945 CSF2RAP15509 400 aa23.5■■□□□ 1.35
CASC4-204ENST00000557945 FBXO47Q5MNV8 452 aa23.5■■□□□ 1.35
CASC4-204ENST00000557945 ODR4Q5SWX8 454 aa23.5■■□□□ 1.35
CASC4-204ENST00000557945 CCDC65Q8IXS2 484 aa23.5■■□□□ 1.35
CASC4-204ENST00000557945 TMEM40Q8WWA1 233 aa23.5■■□□□ 1.35
CASC4-204ENST00000557945 PANK4Q9NVE7 773 aa23.5■■□□□ 1.35
CASC4-204ENST00000557945 RBAK-RBAKDNI3L0D1 243 aa23.49■■□□□ 1.35
CASC4-204ENST00000557945 NBNO60934 754 aa23.49■■□□□ 1.35
CASC4-204ENST00000557945 PRR29P0C7W0 189 aa23.49■■□□□ 1.35
CASC4-204ENST00000557945 DARSP14868 501 aaKnown RBP23.49■■□□□ 1.35
CASC4-204ENST00000557945 EIF4BP23588 611 aaKnown RBP23.49■■□□□ 1.35
CASC4-204ENST00000557945 RFC2P35250 354 aa23.49■■□□□ 1.35
CASC4-204ENST00000557945 NPTX2P47972 431 aa23.49■■□□□ 1.35
CASC4-204ENST00000557945 ZNF131P52739 623 aa23.49■■□□□ 1.35
CASC4-204ENST00000557945 MDM2Q00987 491 aaPredicted RBP23.49■■□□□ 1.35
CASC4-204ENST00000557945 LPIN1Q14693 890 aa23.49■■□□□ 1.35
CASC4-204ENST00000557945 CNNM4Q6P4Q7 775 aa23.49■■□□□ 1.35
CASC4-204ENST00000557945 KIFC3Q9BVG8 833 aa23.49■■□□□ 1.35
CASC4-204ENST00000557945 OSBPL7Q9BZF2 842 aa23.49■■□□□ 1.35
CASC4-204ENST00000557945 IFT122Q9HBG6 1241 aa23.49■■□□□ 1.35
CASC4-204ENST00000557945 KMT5AQ9NQR1 393 aa23.49■■□□□ 1.35
CASC4-204ENST00000557945 HOOK1Q9UJC3 728 aaKnown RBP23.49■■□□□ 1.35
CASC4-204ENST00000557945 CSDE1O75534 798 aaKnown RBP23.48■■□□□ 1.35
CASC4-204ENST00000557945 RPS6KA5O75582 802 aa23.48■■□□□ 1.35
CASC4-204ENST00000557945 MYL1P05976 194 aa23.48■■□□□ 1.35
CASC4-204ENST00000557945 GAP43P17677 238 aa23.48■■□□□ 1.35
CASC4-204ENST00000557945 SMTNP53814 917 aa23.48■■□□□ 1.35
CASC4-204ENST00000557945 PTENP60484 403 aa23.48■■□□□ 1.35
CASC4-204ENST00000557945 FPGSQ05932 587 aa23.48■■□□□ 1.35
CASC4-204ENST00000557945 POU5F1BQ06416 359 aa23.48■■□□□ 1.35
CASC4-204ENST00000557945 POSTNQ15063 836 aa23.48■■□□□ 1.35
CASC4-204ENST00000557945 HERC4Q5GLZ8 1057 aaPredicted RBP23.48■■□□□ 1.35
CASC4-204ENST00000557945 SFR1Q86XK3 245 aa23.48■■□□□ 1.35
CASC4-204ENST00000557945 ZBTB8OSQ8IWT0 167 aa23.48■■□□□ 1.35
CASC4-204ENST00000557945 INO80BQ9C086 356 aaPredicted RBP23.48■■□□□ 1.35
CASC4-204ENST00000557945 KCNG1Q9UIX4 513 aa23.48■■□□□ 1.35
CASC4-204ENST00000557945 NOC2LQ9Y3T9 749 aaKnown RBP23.48■■□□□ 1.35
CASC4-204ENST00000557945 H0YGN5 161 aa23.47■■□□□ 1.35
CASC4-204ENST00000557945 INO80B-WBP1J3KQ70 363 aa23.47■■□□□ 1.35
CASC4-204ENST00000557945 SLC16A4O15374 487 aa23.47■■□□□ 1.35
CASC4-204ENST00000557945 FGFR4P22455 802 aa23.47■■□□□ 1.35
CASC4-204ENST00000557945 PPIGQ13427 754 aaKnown RBP eCLIP23.47■■□□□ 1.35
CASC4-204ENST00000557945 GPNMBQ14956 572 aa23.47■■□□□ 1.35
CASC4-204ENST00000557945 TSHZ1Q6ZSZ6 1077 aa23.47■■□□□ 1.35
CASC4-204ENST00000557945 SRGAP1Q7Z6B7 1085 aa23.47■■□□□ 1.35
CASC4-204ENST00000557945 USP38Q8NB14 1042 aa23.47■■□□□ 1.35
CASC4-204ENST00000557945 SPIRE2Q8WWL2 714 aa23.47■■□□□ 1.35
CASC4-204ENST00000557945 C2orf40Q9H1Z8 148 aa23.47■■□□□ 1.35
CASC4-204ENST00000557945 AGO3Q9H9G7 860 aaKnown RBP23.47■■□□□ 1.35
CASC4-204ENST00000557945 SQORQ9Y6N5 450 aa23.47■■□□□ 1.35
CASC4-204ENST00000557945 TANC1Q9C0D5 1861 aa23.46■■□□□ 1.35
CASC4-204ENST00000557945 TRAK2O60296 914 aa23.46■■□□□ 1.35
CASC4-204ENST00000557945 CD52P31358 61 aa23.46■■□□□ 1.35
CASC4-204ENST00000557945 NFX1Q12986 1120 aaKnown RBP23.46■■□□□ 1.35
CASC4-204ENST00000557945 PAK2Q13177 524 aa23.46■■□□□ 1.35
CASC4-204ENST00000557945 PNOCQ13519 176 aa23.46■■□□□ 1.35
CASC4-204ENST00000557945 UNC13DQ70J99 1090 aa23.46■■□□□ 1.35
CASC4-204ENST00000557945 FAM178BQ8IXR5 827 aa23.46■■□□□ 1.35
CASC4-204ENST00000557945 RPUSD2Q8IZ73 545 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms