RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 A0A1W2PPC1 479 aa28.32■■■□□ 2.12
SMAD6-202ENST00000557916 ZBBXA8MT70 800 aa28.32■■■□□ 2.12
SMAD6-202ENST00000557916 GPBP1Q86WP2 473 aa28.32■■■□□ 2.12
SMAD6-202ENST00000557916 KIFAP3Q92845 792 aa28.32■■■□□ 2.12
SMAD6-202ENST00000557916 IFT122Q9HBG6 1241 aa28.32■■■□□ 2.12
SMAD6-202ENST00000557916 GPR182O15218 404 aa28.31■■■□□ 2.12
SMAD6-202ENST00000557916 CSDE1O75534 798 aaKnown RBP28.31■■■□□ 2.12
SMAD6-202ENST00000557916 BAIAP3O94812 1187 aa28.31■■■□□ 2.12
SMAD6-202ENST00000557916 CMA1P23946 247 aa28.31■■■□□ 2.12
SMAD6-202ENST00000557916 GUCY2CP25092 1073 aa28.31■■■□□ 2.12
SMAD6-202ENST00000557916 RAD51AP2Q09MP3 1159 aa28.31■■■□□ 2.12
SMAD6-202ENST00000557916 NFX1Q12986 1120 aaKnown RBP28.31■■■□□ 2.12
SMAD6-202ENST00000557916 CAPSQ13938 189 aa28.31■■■□□ 2.12
SMAD6-202ENST00000557916 ODR4Q5SWX8 454 aa28.31■■■□□ 2.12
SMAD6-202ENST00000557916 FAM228AQ86W67 206 aa28.31■■■□□ 2.12
SMAD6-202ENST00000557916 TIPINQ9BVW5 301 aa28.31■■■□□ 2.12
SMAD6-202ENST00000557916 INO80BQ9C086 356 aaPredicted RBP28.31■■■□□ 2.12
SMAD6-202ENST00000557916 CXXC1Q9P0U4 656 aaPredicted RBP28.31■■■□□ 2.12
SMAD6-202ENST00000557916 ST3GAL5Q9UNP4 418 aa28.31■■■□□ 2.12
SMAD6-202ENST00000557916 ABHD14A-ACY1A0A1B0GW23 586 aa28.3■■■□□ 2.12
SMAD6-202ENST00000557916 HIP1RO75146 1068 aa28.3■■■□□ 2.12
SMAD6-202ENST00000557916 ARSHQ5FYA8 562 aa28.3■■■□□ 2.12
SMAD6-202ENST00000557916 RASIP1Q5U651 963 aa28.3■■■□□ 2.12
SMAD6-202ENST00000557916 ERVK-5Q9HDB9 667 aa28.3■■■□□ 2.12
SMAD6-202ENST00000557916 EFCAB14O75071 495 aa28.29■■■□□ 2.12
SMAD6-202ENST00000557916 PHKA2P46019 1235 aa28.29■■■□□ 2.12
SMAD6-202ENST00000557916 POU5F1BQ06416 359 aa28.29■■■□□ 2.12
SMAD6-202ENST00000557916 TPRNQ4KMQ1 711 aa28.29■■■□□ 2.12
SMAD6-202ENST00000557916 SV2BQ7L1I2 683 aa28.29■■■□□ 2.12
SMAD6-202ENST00000557916 IQUBQ8NA54 791 aa28.29■■■□□ 2.12
SMAD6-202ENST00000557916 BSNDQ8WZ55 320 aa28.29■■■□□ 2.12
SMAD6-202ENST00000557916 DRC1Q96MC2 740 aa28.29■■■□□ 2.12
SMAD6-202ENST00000557916 NPHP3-ACAD11A0A0J9YXS1 232 aa28.28■■■□□ 2.12
SMAD6-202ENST00000557916 POLR2DO15514 142 aaKnown RBP28.28■■■□□ 2.12
SMAD6-202ENST00000557916 PTENP60484 403 aa28.28■■■□□ 2.12
SMAD6-202ENST00000557916 MAPK7Q13164 816 aa28.28■■■□□ 2.12
SMAD6-202ENST00000557916 E2F4Q16254 413 aa28.28■■■□□ 2.12
SMAD6-202ENST00000557916 SRGAP1Q7Z6B7 1085 aa28.28■■■□□ 2.12
SMAD6-202ENST00000557916 DAW1Q8N136 415 aa28.28■■■□□ 2.12
SMAD6-202ENST00000557916 DHX58Q96C10 678 aa28.28■■■□□ 2.12
SMAD6-202ENST00000557916 IFT74Q96LB3 600 aa28.28■■■□□ 2.12
SMAD6-202ENST00000557916 KCNH3Q9ULD8 1083 aa28.28■■■□□ 2.12
SMAD6-202ENST00000557916 SLC4A7Q9Y6M7 1214 aa28.28■■■□□ 2.12
SMAD6-202ENST00000557916 A0A1W2PQ27 194 aa28.27■■■□□ 2.12
SMAD6-202ENST00000557916 A0A1W2PQ64 194 aa28.27■■■□□ 2.12
SMAD6-202ENST00000557916 A0A1W2PQD8 194 aa28.27■■■□□ 2.12
SMAD6-202ENST00000557916 LRRIQ4A6NIV6 560 aa28.27■■■□□ 2.12
SMAD6-202ENST00000557916 KRT18P05783 430 aaKnown RBP28.27■■■□□ 2.12
SMAD6-202ENST00000557916 FGFR4P22455 802 aa28.27■■■□□ 2.12
SMAD6-202ENST00000557916 SFPQP23246 707 aaKnown RBP eCLIP28.27■■■□□ 2.12
SMAD6-202ENST00000557916 PPP2R5AQ15172 486 aa28.27■■■□□ 2.12
SMAD6-202ENST00000557916 FTHL17Q9BXU8 183 aa28.27■■■□□ 2.12
SMAD6-202ENST00000557916 CUEDC2Q9H467 287 aa28.27■■■□□ 2.12
SMAD6-202ENST00000557916 A0A1B0GVL5 298 aa28.26■■■□□ 2.12
SMAD6-202ENST00000557916 KCNJ6P48051 423 aa28.26■■■□□ 2.12
SMAD6-202ENST00000557916 WDR5P61964 334 aaKnown RBP28.26■■■□□ 2.12
SMAD6-202ENST00000557916 TMX1Q9H3N1 280 aa28.26■■■□□ 2.12
SMAD6-202ENST00000557916 MINDY3Q9H8M7 445 aa28.26■■■□□ 2.12
SMAD6-202ENST00000557916 SFI1A8K8P3 1242 aa28.26■■■□□ 2.11
SMAD6-202ENST00000557916 PFKFB1P16118 471 aa28.26■■■□□ 2.11
SMAD6-202ENST00000557916 NAMPTP43490 491 aa28.26■■■□□ 2.11
SMAD6-202ENST00000557916 CACNB1Q02641 598 aaPredicted RBP28.26■■■□□ 2.11
SMAD6-202ENST00000557916 FAM43BQ6ZT52 329 aaPredicted RBP28.26■■■□□ 2.11
SMAD6-202ENST00000557916 IFNLR1Q8IU57 520 aaPredicted RBP28.26■■■□□ 2.11
SMAD6-202ENST00000557916 REEP2Q9BRK0 252 aa28.26■■■□□ 2.11
SMAD6-202ENST00000557916 PYM1Q9BRP8 204 aaKnown RBP28.26■■■□□ 2.11
SMAD6-202ENST00000557916 NFKBIZQ9BYH8 718 aa28.26■■■□□ 2.11
SMAD6-202ENST00000557916 GOLGA6L4A6NEF3 574 aa28.25■■■□□ 2.11
SMAD6-202ENST00000557916 GIT2Q14161 759 aa28.25■■■□□ 2.11
SMAD6-202ENST00000557916 CATSPER4Q7RTX7 472 aa28.25■■■□□ 2.11
SMAD6-202ENST00000557916 C17orf75Q9HAS0 396 aa28.25■■■□□ 2.11
SMAD6-202ENST00000557916 ODF2LQ9ULJ1 636 aa28.25■■■□□ 2.11
SMAD6-202ENST00000557916 HPSEQ9Y251 543 aa28.25■■■□□ 2.11
SMAD6-202ENST00000557916 INO80B-WBP1J3KQ70 363 aa28.24■■■□□ 2.11
SMAD6-202ENST00000557916 ENPP3O14638 875 aa28.24■■■□□ 2.11
SMAD6-202ENST00000557916 PEX3P56589 373 aa28.24■■■□□ 2.11
SMAD6-202ENST00000557916 CSPP1Q1MSJ5 1256 aa28.24■■■□□ 2.11
SMAD6-202ENST00000557916 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.24■■■□□ 2.11
SMAD6-202ENST00000557916 ZBTB8OSQ8IWT0 167 aa28.24■■■□□ 2.11
SMAD6-202ENST00000557916 FSIP1Q8NA03 581 aa28.24■■■□□ 2.11
SMAD6-202ENST00000557916 DEPTORQ8TB45 409 aa28.24■■■□□ 2.11
SMAD6-202ENST00000557916 MRPS27Q92552 414 aaKnown RBP28.24■■■□□ 2.11
SMAD6-202ENST00000557916 FAM237AA0A1B0GTK4 181 aa28.23■■■□□ 2.11
SMAD6-202ENST00000557916 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.23■■■□□ 2.11
SMAD6-202ENST00000557916 MYMKA6NI61 221 aa28.23■■■□□ 2.11
SMAD6-202ENST00000557916 MBTD1Q05BQ5 628 aa28.23■■■□□ 2.11
SMAD6-202ENST00000557916 DMP1Q13316 513 aaPredicted RBP28.23■■■□□ 2.11
SMAD6-202ENST00000557916 CDCA2Q69YH5 1023 aaPredicted RBP28.23■■■□□ 2.11
SMAD6-202ENST00000557916 DYMQ7RTS9 669 aa28.23■■■□□ 2.11
SMAD6-202ENST00000557916 RTN4RL1Q86UN2 441 aaPredicted RBP28.23■■■□□ 2.11
SMAD6-202ENST00000557916 DDX12PQ92771 950 aa28.23■■■□□ 2.11
SMAD6-202ENST00000557916 C2orf40Q9H1Z8 148 aa28.23■■■□□ 2.11
SMAD6-202ENST00000557916 DENND3A2RUS2 1198 aa28.22■■■□□ 2.11
SMAD6-202ENST00000557916 CCDC169A6NNP5 214 aa28.22■■■□□ 2.11
SMAD6-202ENST00000557916 MGEA5O60502 916 aa28.22■■■□□ 2.11
SMAD6-202ENST00000557916 AMHP03971 560 aa28.22■■■□□ 2.11
SMAD6-202ENST00000557916 PLS3P13797 630 aa28.22■■■□□ 2.11
SMAD6-202ENST00000557916 ATP2A2P16615 1042 aaKnown RBP28.22■■■□□ 2.11
SMAD6-202ENST00000557916 NPTX2P47972 431 aa28.22■■■□□ 2.11
SMAD6-202ENST00000557916 DEFB103AP81534 67 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms