RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 DPH6Q7L8W6 267 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 ASCL5Q7RTU5 278 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 ZBTB33Q86T24 672 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 TRAPPC12Q8WVT3 735 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 FOXJ1Q92949 421 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 CUL5Q93034 780 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 GPRASP2Q96D09 838 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 NEK1Q96PY6 1258 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 PCYT2Q99447 389 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 CDCA3Q99618 268 aaPredicted RBP6.7□□□□□ -1.34
VPS33B-207ENST00000557470 APOL5Q9BWW9 433 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 IRF2BPLQ9H1B7 796 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 S1PR5Q9H228 398 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 SMARCAD1Q9H4L7 1026 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 TMEM260Q9NX78 707 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 LRFN2Q9ULH4 789 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 PCDHB12Q9Y5F1 795 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.7□□□□□ -1.34
VPS33B-207ENST00000557470 SQORQ9Y6N5 450 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 WASF2Q9Y6W5 498 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 KAT6AQ92794 2004 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 ZNF292O60281 2723 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 FSD2A1L4K1 749 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 PRR23AA6NEV1 266 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 RRN3P2A6NIE6 340 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 TBKBP1A7MCY6 615 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 PROB1E7EW31 1015 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 HIP1O00291 1037 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 CLSTN1O94985 981 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 RPLP2P05387 115 aaKnown RBP6.69□□□□□ -1.34
VPS33B-207ENST00000557470 TECP42680 631 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 SARSP49591 514 aaKnown RBP6.69□□□□□ -1.34
VPS33B-207ENST00000557470 ERVFC1P60507 584 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 APOBRQ0VD83 1088 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 MTMR1Q13613 665 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 KCNC3Q14003 757 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 WTAPQ15007 396 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 PLCB4Q15147 1175 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 SPOUT1Q5T280 376 aaKnown RBP6.69□□□□□ -1.34
VPS33B-207ENST00000557470 FAM102BQ5T8I3 360 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 TMEM164Q5U3C3 297 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 PLPP4Q5VZY2 271 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 ANKRD54Q6NXT1 300 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 LLGL2Q6P1M3 1020 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 NOP9Q86U38 636 aaKnown RBP6.69□□□□□ -1.34
VPS33B-207ENST00000557470 THNSL1Q8IYQ7 743 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 COLGALT1Q8NBJ5 622 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 KREMEN2Q8NCW0 462 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 CDHR1Q96JP9 859 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 RIPOR3Q96MK2 946 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 MYL10Q9BUA6 226 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 CELF4Q9BZC1 486 aaKnown RBP6.69□□□□□ -1.34
VPS33B-207ENST00000557470 OSBPL3Q9H4L5 887 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 JPH1Q9HDC5 661 aaPredicted RBP6.69□□□□□ -1.34
VPS33B-207ENST00000557470 TYW1Q9NV66 732 aaKnown RBP6.69□□□□□ -1.34
VPS33B-207ENST00000557470 CDH22Q9UJ99 828 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 PCDHB7Q9Y5E2 793 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 PCDHA2Q9Y5H9 948 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 UBIAD1Q9Y5Z9 338 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 TAF6LQ9Y6J9 622 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 KDM3AQ9Y4C1 1321 aa6.69□□□□□ -1.34
VPS33B-207ENST00000557470 DMXL1Q9Y485 3027 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 ERICH2A1L162 156 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 DENND3A2RUS2 1198 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 HIDE1A8MVS5 230 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 CYP21A2P08686 494 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 SRGAP2BP0DMP2 458 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 FGFR1P11362 822 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 VARSP26640 1264 aaKnown RBP6.68□□□□□ -1.34
VPS33B-207ENST00000557470 ERCC5P28715 1186 aaPredicted RBP6.68□□□□□ -1.34
VPS33B-207ENST00000557470 NBL1P41271 181 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 ANTXR2P58335 489 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 KRT76Q01546 638 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 NFX1Q12986 1120 aaKnown RBP6.68□□□□□ -1.34
VPS33B-207ENST00000557470 TRDNQ13061 729 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 MTMR3Q13615 1198 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 UBE2SQ16763 222 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 C4orf48Q5BLP8 95 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 PDE12Q6L8Q7 609 aaKnown RBP6.68□□□□□ -1.34
VPS33B-207ENST00000557470 MTHFD1LQ6UB35 978 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 TMEM184AQ6ZMB5 413 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 CATIPQ7Z7H3 387 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 CHD1LQ86WJ1 897 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 SMC5Q8IY18 1101 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 TMEM105Q8N8V8 129 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 RASGRP4Q8TDF6 673 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 TMEM40Q8WWA1 233 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 RRP36Q96EU6 259 aaKnown RBP6.68□□□□□ -1.34
VPS33B-207ENST00000557470 ADAM2Q99965 735 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 SPZ1Q9BXG8 430 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 SMOC2Q9H3U7 446 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 AZI2Q9H6S1 392 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 CWH43Q9H720 699 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 PSTPIP2Q9H939 334 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 ERVK-5Q9HDB9 667 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 ENTPD7Q9NQZ7 604 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 BCCIPQ9P287 314 aaKnown RBP eCLIP6.68□□□□□ -1.34
VPS33B-207ENST00000557470 SLC9A2Q9UBY0 812 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 SEC63Q9UGP8 760 aaKnown RBP6.68□□□□□ -1.34
VPS33B-207ENST00000557470 BRPF3Q9ULD4 1205 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms