RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 POLGP54098 1239 aaPredicted RBP10.87□□□□□ -0.67
NEDD1-211ENST00000557454 MRPS9P82933 396 aaKnown RBP10.87□□□□□ -0.67
NEDD1-211ENST00000557454 RRP12Q5JTH9 1297 aaKnown RBP10.87□□□□□ -0.67
NEDD1-211ENST00000557454 PARM1Q6UWI2 310 aa10.87□□□□□ -0.67
NEDD1-211ENST00000557454 ITPRIPQ8IWB1 547 aa10.87□□□□□ -0.67
NEDD1-211ENST00000557454 RNF169Q8NCN4 708 aa10.87□□□□□ -0.67
NEDD1-211ENST00000557454 BCL7CQ8WUZ0 217 aaPredicted RBP10.87□□□□□ -0.67
NEDD1-211ENST00000557454 SMG7Q92540 1137 aaKnown RBP10.87□□□□□ -0.67
NEDD1-211ENST00000557454 KLHL5Q96PQ7 755 aa10.87□□□□□ -0.67
NEDD1-211ENST00000557454 RTEL1Q9NZ71 1219 aa10.87□□□□□ -0.67
NEDD1-211ENST00000557454 PCDHA2Q9Y5H9 948 aa10.87□□□□□ -0.67
NEDD1-211ENST00000557454 HECTD1Q9ULT8 2610 aa10.87□□□□□ -0.67
NEDD1-211ENST00000557454 RRN3P2A6NIE6 340 aa10.86□□□□□ -0.67
NEDD1-211ENST00000557454 FOXP2O15409 715 aa10.86□□□□□ -0.67
NEDD1-211ENST00000557454 HRO43593 1189 aa10.86□□□□□ -0.67
NEDD1-211ENST00000557454 DHX16O60231 1041 aaKnown RBP10.86□□□□□ -0.67
NEDD1-211ENST00000557454 ZC3H11AO75152 810 aaKnown RBP eCLIP10.86□□□□□ -0.67
NEDD1-211ENST00000557454 CNPP09543 421 aaKnown RBP10.86□□□□□ -0.67
NEDD1-211ENST00000557454 CD44P16070 742 aaKnown RBP10.86□□□□□ -0.67
NEDD1-211ENST00000557454 DSC3Q14574 896 aa10.86□□□□□ -0.67
NEDD1-211ENST00000557454 RSPO2Q6UXX9 243 aaPredicted RBP10.86□□□□□ -0.67
NEDD1-211ENST00000557454 TPRG1Q6ZUI0 275 aa10.86□□□□□ -0.67
NEDD1-211ENST00000557454 DDX53Q86TM3 631 aaKnown RBP10.86□□□□□ -0.67
NEDD1-211ENST00000557454 FAM228AQ86W67 206 aa10.86□□□□□ -0.67
NEDD1-211ENST00000557454 FCHSD1Q86WN1 690 aa10.86□□□□□ -0.67
NEDD1-211ENST00000557454 FAM160A2Q8N612 972 aaPredicted RBP10.86□□□□□ -0.67
NEDD1-211ENST00000557454 HELQQ8TDG4 1101 aa10.86□□□□□ -0.67
NEDD1-211ENST00000557454 PPP1R16BQ96T49 567 aa10.86□□□□□ -0.67
NEDD1-211ENST00000557454 VN1R3Q9BXE9 311 aa10.86□□□□□ -0.67
NEDD1-211ENST00000557454 EMILIN2Q9BXX0 1053 aa10.86□□□□□ -0.67
NEDD1-211ENST00000557454 TCP11L1Q9NUJ3 509 aa10.86□□□□□ -0.67
NEDD1-211ENST00000557454 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.86□□□□□ -0.67
NEDD1-211ENST00000557454 GPSM3Q9Y4H4 160 aa10.86□□□□□ -0.67
NEDD1-211ENST00000557454 DOCK5Q9H7D0 1870 aa10.86□□□□□ -0.67
NEDD1-211ENST00000557454 LAMA1P25391 3075 aa10.86□□□□□ -0.67
NEDD1-211ENST00000557454 MYO18BQ8IUG5 2567 aa10.85□□□□□ -0.67
NEDD1-211ENST00000557454 SDK1Q7Z5N4 2213 aa10.85□□□□□ -0.67
NEDD1-211ENST00000557454 GSTTP1A0A1W2PQM5 241 aa10.85□□□□□ -0.67
NEDD1-211ENST00000557454 GPR182O15218 404 aa10.85□□□□□ -0.67
NEDD1-211ENST00000557454 NCAM2O15394 837 aa10.85□□□□□ -0.67
NEDD1-211ENST00000557454 SSBP05455 408 aaKnown RBP eCLIP10.85□□□□□ -0.67
NEDD1-211ENST00000557454 FZD5Q13467 585 aa10.85□□□□□ -0.67
NEDD1-211ENST00000557454 PLCB4Q15147 1175 aa10.85□□□□□ -0.67
NEDD1-211ENST00000557454 ZNF707Q96C28 371 aaPredicted RBP10.85□□□□□ -0.67
NEDD1-211ENST00000557454 IGSF21Q96ID5 467 aa10.85□□□□□ -0.67
NEDD1-211ENST00000557454 RHOBTB2Q9BYZ6 727 aa10.85□□□□□ -0.67
NEDD1-211ENST00000557454 JMJD4Q9H9V9 463 aa10.85□□□□□ -0.67
NEDD1-211ENST00000557454 VAT1LQ9HCJ6 419 aa10.85□□□□□ -0.67
NEDD1-211ENST00000557454 SMIM35A0A1B0GVV1 85 aa10.84□□□□□ -0.67
NEDD1-211ENST00000557454 CHURC1-FNTBB4DL54 471 aa10.84□□□□□ -0.67
NEDD1-211ENST00000557454 PPP1R11O60927 126 aaPredicted RBP10.84□□□□□ -0.67
NEDD1-211ENST00000557454 ZFYP08048 801 aaPredicted RBP10.84□□□□□ -0.67
NEDD1-211ENST00000557454 FNTBP49356 437 aa10.84□□□□□ -0.67
NEDD1-211ENST00000557454 PPP2R5DQ14738 602 aa10.84□□□□□ -0.67
NEDD1-211ENST00000557454 COL28A1Q2UY09 1125 aa10.84□□□□□ -0.67
NEDD1-211ENST00000557454 ODR4Q5SWX8 454 aa10.84□□□□□ -0.67
NEDD1-211ENST00000557454 KIAA1211LQ6NV74 962 aa10.84□□□□□ -0.67
NEDD1-211ENST00000557454 CYP26C1Q6V0L0 522 aa10.84□□□□□ -0.67
NEDD1-211ENST00000557454 FAM43BQ6ZT52 329 aaPredicted RBP10.84□□□□□ -0.67
NEDD1-211ENST00000557454 ECHDC2Q86YB7 292 aa10.84□□□□□ -0.67
NEDD1-211ENST00000557454 NME8Q8N427 588 aa10.84□□□□□ -0.67
NEDD1-211ENST00000557454 SENP7Q9BQF6 1050 aa10.84□□□□□ -0.67
NEDD1-211ENST00000557454 AMNQ9BXJ7 453 aa10.84□□□□□ -0.67
NEDD1-211ENST00000557454 ARRDC1-AS1Q9H2J1 176 aa10.84□□□□□ -0.67
NEDD1-211ENST00000557454 CHRDQ9H2X0 955 aa10.84□□□□□ -0.67
NEDD1-211ENST00000557454 SMOC1Q9H4F8 434 aa10.84□□□□□ -0.67
NEDD1-211ENST00000557454 SMARCAD1Q9H4L7 1026 aa10.84□□□□□ -0.67
NEDD1-211ENST00000557454 CACNA2D2Q9NY47 1150 aa10.84□□□□□ -0.67
NEDD1-211ENST00000557454 RALGAPA1Q6GYQ0 2036 aa10.84□□□□□ -0.67
NEDD1-211ENST00000557454 TENM4Q6N022 2769 aa10.83□□□□□ -0.68
NEDD1-211ENST00000557454 GCOM1H8Y6P7 765 aaPredicted RBP10.83□□□□□ -0.68
NEDD1-211ENST00000557454 STAM2O75886 525 aa10.83□□□□□ -0.68
NEDD1-211ENST00000557454 FGRP09769 529 aa10.83□□□□□ -0.68
NEDD1-211ENST00000557454 ZNF806P0C7X5 589 aa10.83□□□□□ -0.68
NEDD1-211ENST00000557454 POLR2MP0CAP2 368 aa10.83□□□□□ -0.68
NEDD1-211ENST00000557454 PFKPQ01813 784 aa10.83□□□□□ -0.68
NEDD1-211ENST00000557454 ADCY1Q08828 1119 aa10.83□□□□□ -0.68
NEDD1-211ENST00000557454 ZKSCAN2Q63HK3 967 aa10.83□□□□□ -0.68
NEDD1-211ENST00000557454 SEPT1Q8WYJ6 367 aa10.83□□□□□ -0.68
NEDD1-211ENST00000557454 PHKBQ93100 1093 aa10.83□□□□□ -0.68
NEDD1-211ENST00000557454 PHF12Q96QT6 1004 aa10.83□□□□□ -0.68
NEDD1-211ENST00000557454 NELL2Q99435 816 aa10.83□□□□□ -0.68
NEDD1-211ENST00000557454 PCYT2Q99447 389 aa10.83□□□□□ -0.68
NEDD1-211ENST00000557454 OSMRQ99650 979 aa10.83□□□□□ -0.68
NEDD1-211ENST00000557454 MRPL9Q9BYD2 267 aaKnown RBP10.83□□□□□ -0.68
NEDD1-211ENST00000557454 PIDD1Q9HB75 910 aa10.83□□□□□ -0.68
NEDD1-211ENST00000557454 MAP3K20Q9NYL2 800 aaKnown RBP10.83□□□□□ -0.68
NEDD1-211ENST00000557454 ANAPC4Q9UJX5 808 aa10.83□□□□□ -0.68
NEDD1-211ENST00000557454 ADAMTS20P59510 1910 aa10.83□□□□□ -0.68
NEDD1-211ENST00000557454 FRMPD4Q14CM0 1322 aa10.83□□□□□ -0.68
NEDD1-211ENST00000557454 SHISA7A6NL88 538 aa10.82□□□□□ -0.68
NEDD1-211ENST00000557454 AXIN1O15169 862 aa10.82□□□□□ -0.68
NEDD1-211ENST00000557454 MAP3K13O43283 966 aa10.82□□□□□ -0.68
NEDD1-211ENST00000557454 LILRB3O75022 631 aa10.82□□□□□ -0.68
NEDD1-211ENST00000557454 RLBP1P12271 317 aa10.82□□□□□ -0.68
NEDD1-211ENST00000557454 CCR3P51677 355 aa10.82□□□□□ -0.68
NEDD1-211ENST00000557454 SATB1Q01826 763 aa10.82□□□□□ -0.68
NEDD1-211ENST00000557454 KIZQ2M2Z5 673 aa10.82□□□□□ -0.68
NEDD1-211ENST00000557454 RNF43Q68DV7 783 aa10.82□□□□□ -0.68
NEDD1-211ENST00000557454 MTHFD1LQ6UB35 978 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms