RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 TTI1O43156 1089 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 IDH1O75874 414 aaKnown RBP11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 RXRBP28702 533 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 RANBP1P43487 201 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 PDE4DQ08499 809 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 KCNMA1Q12791 1236 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 SF3A3Q12874 501 aaKnown RBP eCLIP11.31□□□□□ -0.63e-7■□□□□ 9.3
SUPT16H-207ENST00000557394 LRRC23Q53EV4 343 aaPredicted RBP11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 C6orf118Q5T5N4 469 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 TMEM154Q6P9G4 183 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 MAEAQ7L5Y9 396 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 SAMD14Q8IZD0 417 aaPredicted RBP11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 FITM2Q8N6M3 262 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 SH3TC2Q8TF17 1288 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 TBC1D5Q92609 795 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 MPHOSPH6Q99547 160 aaKnown RBP11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 C7orf25Q9BPX7 421 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 TRIM9Q9C026 710 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 ZDHHC18Q9NUE0 388 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 CYP39A1Q9NYL5 469 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 CEP72Q9P209 647 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 AMACRQ9UHK6 382 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 PNMA3Q9UL41 463 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 ZMYND8Q9ULU4 1186 aaPredicted RBP11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 ATP8A1Q9Y2Q0 1164 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 ATP6V0A2Q9Y487 856 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 BCORQ6W2J9 1755 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 KRIT1O00522 736 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 ZSCAN9O15535 394 aaPredicted RBP11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 PCK1P35558 622 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 IFI35P80217 286 aaPredicted RBP11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 HLFQ16534 295 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 SFMBT2Q5VUG0 894 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 IRGCQ6NXR0 463 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 SESTD1Q86VW0 696 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 TTC5Q8N0Z6 440 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 METTL13Q8N6R0 699 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 CFAP61Q8NHU2 1237 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 ASAP3Q8TDY4 903 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 RNF25Q96BH1 459 aaPredicted RBP11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 TRIM7Q9C029 511 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 AZI2Q9H6S1 392 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 CNOT7Q9UIV1 285 aaKnown RBP11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 GGT7Q9UJ14 662 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 MAFFQ9ULX9 164 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 TRIM33Q9UPN9 1127 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 UTP11Q9Y3A2 253 aaKnown RBP11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 hCG_1642624A0A1W2PR95 340 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 RGS16O15492 202 aaPredicted RBP11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 UNC5CO95185 931 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 PLEKHA8P1O95397 391 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 RAD23BP54727 409 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 PLEKHG6Q3KR16 790 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 RNF43Q68DV7 783 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 BTNL9Q6UXG8 535 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 GPIHBP1Q8IV16 184 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 SLC43A3Q8NBI5 491 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 KIAA0895Q8NCT3 520 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 NAP1L4Q99733 375 aaKnown RBP11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 PACSIN1Q9BY11 444 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 ZMYND12Q9H0C1 365 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 RNF41Q9H4P4 317 aaPredicted RBP11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 ZNF652Q9Y2D9 606 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 TMEM98Q9Y2Y6 226 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 CD2APQ9Y5K6 639 aa11.3□□□□□ -0.6
SUPT16H-207ENST00000557394 BRWD3Q6RI45 1802 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 TNKSO95271 1327 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 CNTNAP5Q8WYK1 1306 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 KCPQ6ZWJ8 1503 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 A0A087X0T9 212 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 NOL4O94818 638 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 FGFR1OPO95684 399 aaKnown RBP11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 GSTA2P09210 222 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 FAM228BP0C875 321 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 RBP3P10745 1247 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 FCER1AP12319 257 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 ITGA4P13612 1032 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 PSMC4P43686 418 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 PMS2P54278 862 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 C10orf76Q5T2E6 689 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 DUPD1Q68J44 220 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 ANKLE1Q8NAG6 615 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 GIMAP1Q8WWP7 306 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 VCXQ9H320 206 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 ATP8A2Q9NTI2 1148 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 TTC7AQ9ULT0 858 aaPredicted RBP11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 STXBP5LQ9Y2K9 1186 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 ATP8B3O60423 1300 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 FLT1P17948 1338 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 PP2D1A8MPX8 630 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 TMEM110-MUSTN1A8MSY1 372 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 MBD4O95243 580 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 PDHA1P08559 390 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 MYBL1P10243 752 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 KLRC3Q07444 240 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 TOMM20Q15388 145 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 CCDC152Q4G0S7 254 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 PABPC1LQ4VXU2 614 aaKnown RBP11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 ACBD5Q5T8D3 534 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms