RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 ARID2Q68CP9 1835 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 F8VZ95 297 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 FZD9O00144 591 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 NFKBIEO00221 500 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 VWA5AO00534 786 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 ZBTB39O15060 712 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 BUB1O43683 1085 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 TMEM253P0C7T8 217 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 YWHABP31946 246 aaKnown RBP9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 CYP2C19P33261 490 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 RTP1P59025 263 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 MYL7Q01449 175 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 APBA1Q02410 837 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 ARID5AQ03989 594 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 C2orf54Q08AI8 447 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 KIF22Q14807 665 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 TCEAL1Q15170 157 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 RPS6KA1Q15418 735 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 CLUL1Q15846 466 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 ARHGEF16Q5VV41 709 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 EMBQ6PCB8 327 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 OTUD6AQ7L8S5 288 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 VSIG10LQ86VR7 867 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 CCDC125Q86Z20 511 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 MICALL2Q8IY33 904 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 CPXCR1Q8N123 301 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 ANKRD13CQ8N6S4 541 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 LRRC57Q8N9N7 239 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 XXYLT1Q8NBI6 393 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 ZNF280CQ8ND82 737 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 AENQ8WTP8 325 aaKnown RBP9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 SPIRE2Q8WWL2 714 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 KCNN1Q92952 543 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 CDHR1Q96JP9 859 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 CCDC43Q96MW1 224 aaKnown RBP9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 INPP4AQ96PE3 977 aaPredicted RBP9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 RMDN3Q96TC7 470 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 SYT11Q9BT88 431 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 SELENOOQ9BVL4 669 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 MTFR1LQ9H019 292 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 ZMYND15Q9H091 742 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 INTS2Q9H0H0 1204 aaKnown RBP9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 BCAS3Q9H6U6 928 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 SUCLA2Q9P2R7 463 aaPredicted RBP9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 APEX2Q9UBZ4 518 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 CNOT7Q9UIV1 285 aaKnown RBP9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 HACL1Q9UJ83 578 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 DNAJC12Q9UKB3 198 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 PRDM4Q9UKN5 801 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 CD2APQ9Y5K6 639 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 MYH9P35579 1960 aaKnown RBP9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 NCANO14594 1321 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 ASTN2O75129 1339 aaPredicted RBP9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 NFASCO94856 1347 aa9.73□□□□□ -0.85
PPP4R3A-212ENST00000557382 DICER1Q9UPY3 1922 aaKnown RBP9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 A0A0U1RQG5 324 aaPredicted RBP9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 H0YCG3 227 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 H3BQF6 201 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 DDX39AO00148 427 aaKnown RBP9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 DDX3XO00571 662 aaKnown RBP eCLIP9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 EVI5O60447 810 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 KIF4AO95239 1232 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 GMPSP49915 693 aaPredicted RBP9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 CYP2J2P51589 502 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 VAMP7P51809 220 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 SMTNP53814 917 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 EPHB4P54760 987 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 HADHBP55084 474 aaKnown RBP9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 TNNC1P63316 161 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 MTMR2Q13614 643 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 DRAP1Q14919 205 aaPredicted RBP9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 NOL9Q5SY16 702 aaKnown RBP9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 C8orf74Q6P047 294 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 SLC30A10Q6XR72 485 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 HAUS6Q7Z4H7 955 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 IFT20Q8IY31 132 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 REPS2Q8NFH8 660 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 TPCN2Q8NHX9 752 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 LMO3Q8TAP4 145 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 ACTRT1Q8TDG2 376 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 NSUN6Q8TEA1 469 aaKnown RBP9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 KIFAP3Q92845 792 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 ATP6V0A1Q93050 837 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 CAVIN3Q969G5 261 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 PKNOX2Q96KN3 472 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 NTPCRQ9BSD7 190 aaKnown RBP9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 MOV10L1Q9BXT6 1211 aaKnown RBP9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 PDE11AQ9HCR9 933 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 ST7Q9NRC1 585 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 PICK1Q9NRD5 415 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 RNF146Q9NTX7 359 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 STIM2Q9P246 746 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 TMEM59LQ9UK28 342 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 HPCAL4Q9UM19 191 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 FARP1Q9Y4F1 1045 aaPredicted RBP9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 SAMM50Q9Y512 469 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 PCDHA10Q9Y5I2 948 aa9.72□□□□□ -0.85
PPP4R3A-212ENST00000557382 CCDC66A2RUB6 948 aa9.71□□□□□ -0.86
PPP4R3A-212ENST00000557382 LRRIQ3A6PVS8 624 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms