RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 IL12RB1P42701 662 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 CRYMQ14894 314 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 AKAP4Q5JQC9 854 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 ELMOD1Q8N336 334 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 KCNA3P22001 575 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 ZBED6P86452 979 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 PNOCQ13519 176 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 APOA5Q6Q788 366 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 PSMA8Q8TAA3 256 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 MAGED4Q96JG8 741 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 FAM161BQ96MY7 647 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 V9GY48 417 aaPredicted RBP9.36□□□□□ -0.91
SYNE3-205ENST00000557275 SPAG6O75602 509 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 STAT5AP42229 794 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 STAT5BP51692 787 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 BLMP54132 1417 aaPredicted RBP9.36□□□□□ -0.91
SYNE3-205ENST00000557275 TERF2Q15554 542 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 BEND6Q5SZJ8 279 aaPredicted RBP9.36□□□□□ -0.91
SYNE3-205ENST00000557275 GPATCH4Q5T3I0 446 aaKnown RBP9.36□□□□□ -0.91
SYNE3-205ENST00000557275 PLEKHM2Q8IWE5 1019 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 TDRD7Q8NHU6 1098 aaKnown RBP9.36□□□□□ -0.91
SYNE3-205ENST00000557275 GPCPD1Q9NPB8 672 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 GTSE1Q9NYZ3 720 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 CLASP2O75122 1294 aaKnown RBP9.36□□□□□ -0.91
SYNE3-205ENST00000557275 LBRQ14739 615 aaKnown RBP9.36□□□□□ -0.91
SYNE3-205ENST00000557275 ABCC5O15440 1437 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 EIF3HO15372 352 aaKnown RBP eCLIP9.36□□□□□ -0.91
SYNE3-205ENST00000557275 USH1GQ495M9 461 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 THAP9Q9H5L6 903 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 MLXIPQ9HAP2 919 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 NIP7Q9Y221 180 aaKnown RBP eCLIP9.36□□□□□ -0.91
SYNE3-205ENST00000557275 PDZK1P1A8MUH7 402 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 GPAA1O43292 621 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 DLGAP3O95886 979 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 SERPINB3P29508 390 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 TBL3Q12788 808 aaKnown RBP9.36□□□□□ -0.91
SYNE3-205ENST00000557275 KLHL24Q6TFL4 600 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 TBC1D7Q9P0N9 293 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 FLT4P35916 1363 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 MYBL1P10243 752 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 LMBR1LQ6UX01 489 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 SNF8Q96H20 258 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 FOXP1Q9H334 677 aaPredicted RBP9.36□□□□□ -0.91
SYNE3-205ENST00000557275 CD209Q9NNX6 404 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 PCDH11XQ9BZA7 1347 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 PCDH11YQ9BZA8 1340 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 H0Y3Z8 333 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 DNALI1O14645 258 aaPredicted RBP9.36□□□□□ -0.91
SYNE3-205ENST00000557275 FCGR1AP12314 374 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 PSMC3P17980 439 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 MTFR1Q15390 333 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 TMED8Q6PL24 325 aaPredicted RBP9.36□□□□□ -0.91
SYNE3-205ENST00000557275 CHAMP1Q96JM3 812 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 WDR11Q9BZH6 1224 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 UBE2OQ9C0C9 1292 aaKnown RBP9.36□□□□□ -0.91
SYNE3-205ENST00000557275 POLR3EQ9NVU0 708 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 ZMYM4Q5VZL5 1548 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 DSG1Q02413 1049 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 KBTBD12Q3ZCT8 623 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 TRIM72Q6ZMU5 477 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 KIAA1586Q9HCI6 787 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 PLCH2O75038 1416 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 DHX34Q14147 1143 aaKnown RBP9.36□□□□□ -0.91
SYNE3-205ENST00000557275 FASTKD5Q7L8L6 764 aaKnown RBP9.36□□□□□ -0.91
SYNE3-205ENST00000557275 RBBP8Q99708 897 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 RGS12O14924 1447 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 APC2O95996 2303 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 DHX36Q9H2U1 1008 aaKnown RBP9.35□□□□□ -0.91
SYNE3-205ENST00000557275 PARVAQ9NVD7 372 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 RNF103O00237 685 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 ACSL3O95573 720 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 LDHAP00338 332 aaKnown RBP9.35□□□□□ -0.91
SYNE3-205ENST00000557275 WDR60Q8WVS4 1066 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 TESK2Q96S53 571 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 KRT84Q9NSB2 600 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 POLR2MP0CAP2 368 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 BCAP31P51572 246 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 CCNA1P78396 465 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 STXBP2Q15833 593 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 MICU2Q8IYU8 434 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 RIBC1Q8N443 379 aaPredicted RBP9.35□□□□□ -0.91
SYNE3-205ENST00000557275 DPP10Q8N608 796 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 TOP2BQ02880 1626 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 TSPAN9O75954 239 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 ITGAXP20702 1163 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 CHRNA3P32297 505 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 C8orf34Q49A92 452 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 RABGAP1LQ5R372 815 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 KRT40Q6A162 431 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 CROCCP3Q8IVE0 287 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 TCEANC2Q96MN5 208 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 DMAP1Q9NPF5 467 aaPredicted RBP9.35□□□□□ -0.91
SYNE3-205ENST00000557275 CACNA1FO60840 1977 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 H3BMM5 538 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 WASLO00401 505 aaPredicted RBP9.35□□□□□ -0.91
SYNE3-205ENST00000557275 RAD51Q06609 339 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 PHKG1Q16816 387 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 KBTBD3Q8NAB2 608 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 MDM1Q8TC05 714 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 VPS33AQ96AX1 596 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms