RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 RNF19AQ9NV58 838 aa25.35■■□□□ 1.65
TMEM260-214ENST00000556975 TYW1Q9NV66 732 aaKnown RBP25.35■■□□□ 1.65
TMEM260-214ENST00000556975 PCDHB12Q9Y5F1 795 aa25.35■■□□□ 1.65
TMEM260-214ENST00000556975 CSDE1O75534 798 aaKnown RBP25.34■■□□□ 1.65
TMEM260-214ENST00000556975 SFPQP23246 707 aaKnown RBP eCLIP25.34■■□□□ 1.65
TMEM260-214ENST00000556975 DNAJB1P25685 340 aa25.34■■□□□ 1.65
TMEM260-214ENST00000556975 POLGP54098 1239 aaPredicted RBP25.34■■□□□ 1.65
TMEM260-214ENST00000556975 GUCY1B3Q02153 619 aa25.34■■□□□ 1.65
TMEM260-214ENST00000556975 CYP4A11Q02928 519 aa25.34■■□□□ 1.65
TMEM260-214ENST00000556975 ZNF598Q86UK7 904 aaKnown RBP25.34■■□□□ 1.65
TMEM260-214ENST00000556975 KSR1Q8IVT5 923 aa25.34■■□□□ 1.65
TMEM260-214ENST00000556975 FBXO18Q8NFZ0 1043 aa25.34■■□□□ 1.65
TMEM260-214ENST00000556975 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.34■■□□□ 1.65
TMEM260-214ENST00000556975 CASD1Q96PB1 797 aa25.34■■□□□ 1.65
TMEM260-214ENST00000556975 FOXP1Q9H334 677 aaPredicted RBP25.34■■□□□ 1.65
TMEM260-214ENST00000556975 CWH43Q9H720 699 aa25.34■■□□□ 1.65
TMEM260-214ENST00000556975 IFT122Q9HBG6 1241 aa25.34■■□□□ 1.65
TMEM260-214ENST00000556975 TXKP42681 527 aa25.33■■□□□ 1.65
TMEM260-214ENST00000556975 UBE3AQ05086 875 aa25.33■■□□□ 1.65
TMEM260-214ENST00000556975 CSPP1Q1MSJ5 1256 aa25.33■■□□□ 1.65
TMEM260-214ENST00000556975 CTC1Q2NKJ3 1217 aa25.33■■□□□ 1.65
TMEM260-214ENST00000556975 TPH2Q8IWU9 490 aa25.33■■□□□ 1.65
TMEM260-214ENST00000556975 POF1BQ8WVV4 589 aa25.33■■□□□ 1.65
TMEM260-214ENST00000556975 COL4A3BPQ9Y5P4 624 aa25.33■■□□□ 1.65
TMEM260-214ENST00000556975 ZBTB39O15060 712 aa25.32■■□□□ 1.64
TMEM260-214ENST00000556975 ASAP2O43150 1006 aa25.32■■□□□ 1.64
TMEM260-214ENST00000556975 HYAL1Q12794 435 aa25.32■■□□□ 1.64
TMEM260-214ENST00000556975 ORC2Q13416 577 aaPredicted RBP25.32■■□□□ 1.64
TMEM260-214ENST00000556975 PUS10Q3MIT2 529 aaKnown RBP25.32■■□□□ 1.64
TMEM260-214ENST00000556975 XKR9Q5GH70 373 aa25.32■■□□□ 1.64
TMEM260-214ENST00000556975 SPOUT1Q5T280 376 aaKnown RBP25.32■■□□□ 1.64
TMEM260-214ENST00000556975 TCP11Q8WWU5 503 aa25.32■■□□□ 1.64
TMEM260-214ENST00000556975 PRPF31Q8WWY3 499 aaKnown RBP25.32■■□□□ 1.64
TMEM260-214ENST00000556975 PSPC1Q8WXF1 523 aaKnown RBP25.32■■□□□ 1.64
TMEM260-214ENST00000556975 NLRP4Q96MN2 994 aa25.32■■□□□ 1.64
TMEM260-214ENST00000556975 TMEM60Q9H2L4 133 aa25.32■■□□□ 1.64
TMEM260-214ENST00000556975 RAPGEFL1Q9UHV5 662 aa25.32■■□□□ 1.64
TMEM260-214ENST00000556975 LAG3P18627 525 aa25.31■■□□□ 1.64
TMEM260-214ENST00000556975 LRRC55Q6ZSA7 311 aa25.31■■□□□ 1.64
TMEM260-214ENST00000556975 COLGALT1Q8NBJ5 622 aa25.31■■□□□ 1.64
TMEM260-214ENST00000556975 TMEM143Q96AN5 459 aa25.31■■□□□ 1.64
TMEM260-214ENST00000556975 ANKEF1Q9NU02 776 aa25.31■■□□□ 1.64
TMEM260-214ENST00000556975 XRCC6P12956 609 aaKnown RBP eCLIP25.3■■□□□ 1.64
TMEM260-214ENST00000556975 ATF7P17544 494 aaPredicted RBP25.3■■□□□ 1.64
TMEM260-214ENST00000556975 LTBRP36941 435 aa25.3■■□□□ 1.64
TMEM260-214ENST00000556975 LAMTOR4Q0VGL1 99 aa25.3■■□□□ 1.64
TMEM260-214ENST00000556975 EMC2Q15006 297 aa25.3■■□□□ 1.64
TMEM260-214ENST00000556975 RABEP1Q15276 862 aa25.3■■□□□ 1.64
TMEM260-214ENST00000556975 CLLU1OSQ5K130 101 aa25.3■■□□□ 1.64
TMEM260-214ENST00000556975 SRGAP1Q7Z6B7 1085 aa25.3■■□□□ 1.64
TMEM260-214ENST00000556975 ABI1Q8IZP0 508 aa25.3■■□□□ 1.64
TMEM260-214ENST00000556975 FAM184AQ8NB25 1140 aa25.3■■□□□ 1.64
TMEM260-214ENST00000556975 RSPH1Q8WYR4 309 aa25.3■■□□□ 1.64
TMEM260-214ENST00000556975 PPP2R3CQ969Q6 453 aa25.3■■□□□ 1.64
TMEM260-214ENST00000556975 CLDND1Q9NY35 253 aa25.3■■□□□ 1.64
TMEM260-214ENST00000556975 HCSTQ9UBK5 93 aa25.3■■□□□ 1.64
TMEM260-214ENST00000556975 GRXCR2A6NFK2 248 aa25.29■■□□□ 1.64
TMEM260-214ENST00000556975 ZNF623O75123 536 aa25.29■■□□□ 1.64
TMEM260-214ENST00000556975 FGF18O76093 207 aa25.29■■□□□ 1.64
TMEM260-214ENST00000556975 SKIP12755 728 aa25.29■■□□□ 1.64
TMEM260-214ENST00000556975 ATP2B1P20020 1258 aa25.29■■□□□ 1.64
TMEM260-214ENST00000556975 MCM7P33993 719 aa25.29■■□□□ 1.64
TMEM260-214ENST00000556975 IRS1P35568 1242 aa25.29■■□□□ 1.64
TMEM260-214ENST00000556975 PHKA2P46019 1235 aa25.29■■□□□ 1.64
TMEM260-214ENST00000556975 CATSPER4Q7RTX7 472 aa25.29■■□□□ 1.64
TMEM260-214ENST00000556975 FERMT3Q86UX7 667 aa25.29■■□□□ 1.64
TMEM260-214ENST00000556975 LRRC43Q8N309 656 aa25.29■■□□□ 1.64
TMEM260-214ENST00000556975 MTRQ99707 1265 aa25.29■■□□□ 1.64
TMEM260-214ENST00000556975 PLXNA4Q9HCM2 1894 aa25.29■■□□□ 1.64
TMEM260-214ENST00000556975 ARID2Q68CP9 1835 aa25.28■■□□□ 1.64
TMEM260-214ENST00000556975 H3BQ06 376 aaPredicted RBP25.28■■□□□ 1.64
TMEM260-214ENST00000556975 PLCB3Q01970 1234 aa25.28■■□□□ 1.64
TMEM260-214ENST00000556975 TWF2Q6IBS0 349 aaKnown RBP25.28■■□□□ 1.64
TMEM260-214ENST00000556975 PTCRAQ6ISU1 281 aaPredicted RBP25.28■■□□□ 1.64
TMEM260-214ENST00000556975 XPNPEP1Q9NQW7 623 aa25.28■■□□□ 1.64
TMEM260-214ENST00000556975 PIN4Q9Y237 131 aaKnown RBP25.28■■□□□ 1.64
TMEM260-214ENST00000556975 LZTS1Q9Y250 596 aa25.28■■□□□ 1.64
TMEM260-214ENST00000556975 DGAT1O75907 488 aa25.27■■□□□ 1.64
TMEM260-214ENST00000556975 SRGAP2CP0DJJ0 459 aa25.27■■□□□ 1.64
TMEM260-214ENST00000556975 TRAPPC10P48553 1259 aa25.27■■□□□ 1.64
TMEM260-214ENST00000556975 ADAM15Q13444 863 aa25.27■■□□□ 1.64
TMEM260-214ENST00000556975 MXD4Q14582 209 aaPredicted RBP25.27■■□□□ 1.64
TMEM260-214ENST00000556975 KCNT2Q6UVM3 1135 aa25.27■■□□□ 1.64
TMEM260-214ENST00000556975 NOSTRINQ8IVI9 506 aa25.27■■□□□ 1.64
TMEM260-214ENST00000556975 THNSL1Q8IYQ7 743 aa25.27■■□□□ 1.64
TMEM260-214ENST00000556975 RNF169Q8NCN4 708 aa25.27■■□□□ 1.64
TMEM260-214ENST00000556975 AGPAT5Q9NUQ2 364 aa25.27■■□□□ 1.64
TMEM260-214ENST00000556975 FAM105AQ9NUU6 356 aa25.27■■□□□ 1.64
TMEM260-214ENST00000556975 POTEMA6NI47 508 aa25.26■■□□□ 1.63
TMEM260-214ENST00000556975 SPATA31C1P0DKV0 1188 aa25.26■■□□□ 1.63
TMEM260-214ENST00000556975 GTF2F1P35269 517 aaKnown RBP eCLIP25.26■■□□□ 1.63
TMEM260-214ENST00000556975 RARRES1P49788 294 aa25.26■■□□□ 1.63
TMEM260-214ENST00000556975 RAB27AP51159 221 aa25.26■■□□□ 1.63
TMEM260-214ENST00000556975 POU5F1BQ06416 359 aa25.26■■□□□ 1.63
TMEM260-214ENST00000556975 ZNF174Q15697 407 aa25.26■■□□□ 1.63
TMEM260-214ENST00000556975 PDE12Q6L8Q7 609 aaKnown RBP25.26■■□□□ 1.63
TMEM260-214ENST00000556975 FAM178BQ8IXR5 827 aa25.26■■□□□ 1.63
TMEM260-214ENST00000556975 MRPL9Q9BYD2 267 aaKnown RBP25.26■■□□□ 1.63
TMEM260-214ENST00000556975 MINDY3Q9H8M7 445 aa25.26■■□□□ 1.63
TMEM260-214ENST00000556975 TUFT1Q9NNX1 390 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms