RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	ADGRG1	Q9Y653	693 aa		9.83	□□□□□ -0.84
PRKCH-222	ENST00000556778	DOCK5	Q9H7D0	1870 aa		9.83	□□□□□ -0.84
PRKCH-222	ENST00000556778	SCN10A	Q9Y5Y9	1956 aa		9.83	□□□□□ -0.84
PRKCH-222	ENST00000556778	LAMA3	Q16787	3333 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778		A0A087WZ62	844 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	NPHP3-ACAD11	A0A0J9YXS1	232 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	ZBBX	A8MT70	800 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	USO1	O60763	962 aa	Known RBP	9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	DKC1	O60832	514 aa	Known RBP eCLIP	9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	SRGAP2C	P0DJJ0	459 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	MYOG	P15173	224 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	FECH	P22830	423 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	RFC2	P35250	354 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	GPC3	P51654	580 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	POLG	P54098	1239 aa	Predicted RBP	9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	DEFB103A	P81534	67 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	EMC2	Q15006	297 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	KARS	Q15046	597 aa	Known RBP	9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	TPRN	Q4KMQ1	711 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	KRT79	Q5XKE5	535 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	RSPH3	Q86UC2	560 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	CABP7	Q86V35	215 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	RHPN2	Q8IUC4	686 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	NEK9	Q8TD19	979 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	ASAP3	Q8TDY4	903 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	NACC1	Q96RE7	527 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	FDXACB1	Q9BRP7	624 aa	Predicted RBP	9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	ANKEF1	Q9NU02	776 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	PADI3	Q9ULW8	664 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	SRPRB	Q9Y5M8	271 aa	Known RBP	9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778	TRPV2	Q9Y5S1	764 aa		9.82	□□□□□ -0.84
PRKCH-222	ENST00000556778		A0A087X0B3	334 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	SFI1	A8K8P3	1242 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	ENPP3	O14638	875 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	MGEA5	O60502	916 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	CAND2	O75155	1236 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	XRCC6	P12956	609 aa	Known RBP eCLIP	9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	IBSP	P21815	317 aa	Predicted RBP	9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	ARL2	P36404	184 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	CRYBB1	P53674	252 aa	Predicted RBP	9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	RAD51AP2	Q09MP3	1159 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	LAMTOR4	Q0VGL1	99 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	NFX1	Q12986	1120 aa	Known RBP	9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	DHX8	Q14562	1220 aa	Known RBP	9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	STK38	Q15208	465 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	FAM117B	Q6P1L5	589 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	PSRC1	Q6PGN9	363 aa	Predicted RBP	9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	SHC4	Q6S5L8	630 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	LINC01599	Q8WXQ3	324 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	SLC7A3	Q8WY07	619 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	BSND	Q8WZ55	320 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	SYMPK	Q92797	1274 aa	Known RBP	9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	NLRP4	Q96MN2	994 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	ZNF396	Q96N95	335 aa	Predicted RBP	9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	RUSC1	Q9BVN2	902 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	IFIH1	Q9BYX4	1025 aa	Known RBP	9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	MINDY3	Q9H8M7	445 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	IFT122	Q9HBG6	1241 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	GDPD2	Q9HCC8	539 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	DBR1	Q9UK59	544 aa	Known RBP	9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	ST3GAL5	Q9UNP4	418 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	USP20	Q9Y2K6	914 aa		9.81	□□□□□ -0.84
PRKCH-222	ENST00000556778	SPTLC2	O15270	562 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	RPS6KA5	O75582	802 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	ARHGEF15	O94989	841 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	SSB	P05455	408 aa	Known RBP eCLIP	9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	PLCG1	P19174	1290 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	GLRA2	P23416	452 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	TMOD1	P28289	359 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	LONP1	P36776	959 aa	Known RBP	9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	RFC5	P40937	340 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	UBA7	P41226	1012 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	FXR1	P51114	621 aa	Known RBP eCLIP	9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	WDR5	P61964	334 aa	Known RBP	9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	IKBKE	Q14164	716 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	TMEM119	Q4V9L6	283 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	ARSH	Q5FYA8	562 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	HYI	Q5T013	277 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	AXDND1	Q5T1B0	1012 aa	Predicted RBP	9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	FAM102B	Q5T8I3	360 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	HAUS3	Q68CZ6	603 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	CNKSR3	Q6P9H4	555 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	SPRED2	Q7Z698	418 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	FAM228A	Q86W67	206 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	KRI1	Q8N9T8	703 aa	Known RBP	9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	NLRP7	Q8WX94	980 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	SEPT8	Q92599	483 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	MAP7D2	Q96T17	732 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	MTR	Q99707	1265 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	RAB34	Q9BZG1	259 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	POLR3F	Q9H1D9	316 aa	Predicted RBP	9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	ERVK-5	Q9HDB9	667 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	BLOC1S4	Q9NUP1	217 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	RCOR1	Q9UKL0	485 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	PCDHA7	Q9UN72	937 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	DNM3	Q9UQ16	869 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	RBM19	Q9Y4C8	960 aa	Known RBP	9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	SLC4A7	Q9Y6M7	1214 aa		9.8	□□□□□ -0.84
PRKCH-222	ENST00000556778	LCHN	A4D1U4	455 aa		9.79	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms