RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 C1orf112Q9NSG2 853 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 LRWD1Q9UFC0 647 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 LRFN2Q9ULH4 789 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 PPME1Q9Y570 386 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 MTCH2Q9Y6C9 303 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 MRPL42Q9Y6G3 142 aaKnown RBP11.56□□□□□ -0.56
SNX6-208ENST00000556712 PRRC2BQ5JSZ5 2229 aaKnown RBP11.56□□□□□ -0.56
SNX6-208ENST00000556712 REV3LO60673 3130 aa11.55□□□□□ -0.56
SNX6-208ENST00000556712 DGAT1O75907 488 aa11.55□□□□□ -0.56
SNX6-208ENST00000556712 STAG3L1P0CL83 205 aa11.55□□□□□ -0.56
SNX6-208ENST00000556712 SFPQP23246 707 aaKnown RBP eCLIP11.55□□□□□ -0.56
SNX6-208ENST00000556712 RPA1P27694 616 aa11.55□□□□□ -0.56
SNX6-208ENST00000556712 ATP2C1P98194 919 aaPredicted RBP11.55□□□□□ -0.56
SNX6-208ENST00000556712 CAPSQ13938 189 aa11.55□□□□□ -0.56
SNX6-208ENST00000556712 FAM102BQ5T8I3 360 aa11.55□□□□□ -0.56
SNX6-208ENST00000556712 HAUS3Q68CZ6 603 aa11.55□□□□□ -0.56
SNX6-208ENST00000556712 SLC24A5Q71RS6 500 aa11.55□□□□□ -0.56
SNX6-208ENST00000556712 CATSPER4Q7RTX7 472 aa11.55□□□□□ -0.56
SNX6-208ENST00000556712 TMEM192Q8IY95 271 aa11.55□□□□□ -0.56
SNX6-208ENST00000556712 RNF149Q8NC42 400 aa11.55□□□□□ -0.56
SNX6-208ENST00000556712 RNF169Q8NCN4 708 aa11.55□□□□□ -0.56
SNX6-208ENST00000556712 SLC17A8Q8NDX2 589 aa11.55□□□□□ -0.56
SNX6-208ENST00000556712 POLR3FQ9H1D9 316 aaPredicted RBP11.55□□□□□ -0.56
SNX6-208ENST00000556712 RNF19AQ9NV58 838 aa11.55□□□□□ -0.56
SNX6-208ENST00000556712 PIN4Q9Y237 131 aaKnown RBP11.55□□□□□ -0.56
SNX6-208ENST00000556712 VWA3AA6NCI4 1184 aa11.54□□□□□ -0.56
SNX6-208ENST00000556712 TBKBP1A7MCY6 615 aa11.54□□□□□ -0.56
SNX6-208ENST00000556712 LAD1O00515 517 aa11.54□□□□□ -0.56
SNX6-208ENST00000556712 GTPBP6O43824 516 aaPredicted RBP11.54□□□□□ -0.56
SNX6-208ENST00000556712 GAS2O43903 313 aaKnown RBP11.54□□□□□ -0.56
SNX6-208ENST00000556712 ZSCAN20P17040 1043 aaPredicted RBP11.54□□□□□ -0.56
SNX6-208ENST00000556712 ATF7P17544 494 aaPredicted RBP11.54□□□□□ -0.56
SNX6-208ENST00000556712 SYT1P21579 422 aa11.54□□□□□ -0.56
SNX6-208ENST00000556712 GLRA2P23416 452 aa11.54□□□□□ -0.56
SNX6-208ENST00000556712 PRPHP41219 470 aa11.54□□□□□ -0.56
SNX6-208ENST00000556712 LONRF3Q496Y0 759 aa11.54□□□□□ -0.56
SNX6-208ENST00000556712 FAM173BQ6P4H8 233 aa11.54□□□□□ -0.56
SNX6-208ENST00000556712 DTHD1Q6ZMT9 781 aa11.54□□□□□ -0.56
SNX6-208ENST00000556712 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.54□□□□□ -0.56
SNX6-208ENST00000556712 CMTR2Q8IYT2 770 aaKnown RBP11.54□□□□□ -0.56
SNX6-208ENST00000556712 ZNF710Q8N1W2 664 aa11.54□□□□□ -0.56
SNX6-208ENST00000556712 TCP11Q8WWU5 503 aa11.54□□□□□ -0.56
SNX6-208ENST00000556712 MMTAG2Q9BU76 263 aaKnown RBP11.54□□□□□ -0.56
SNX6-208ENST00000556712 DDX19AQ9NUU7 478 aaKnown RBP11.54□□□□□ -0.56
SNX6-208ENST00000556712 DBR1Q9UK59 544 aaKnown RBP11.54□□□□□ -0.56
SNX6-208ENST00000556712 KIAA1024Q9UPX6 916 aa11.54□□□□□ -0.56
SNX6-208ENST00000556712 PCDHB7Q9Y5E2 793 aa11.54□□□□□ -0.56
SNX6-208ENST00000556712 PRUNE2Q8WUY3 3088 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 ARHGEF35A5YM69 484 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 E9PMD0 336 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 PDCP20941 246 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 ARL2P36404 184 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 PHKA2P46019 1235 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 CDC42EP1Q00587 391 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 RESTQ13127 1097 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 GPM6BQ13491 265 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 ZRSR1Q15695 479 aaKnown RBP11.53□□□□□ -0.56
SNX6-208ENST00000556712 CLLU1OSQ5K130 101 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 TWF2Q6IBS0 349 aaKnown RBP11.53□□□□□ -0.56
SNX6-208ENST00000556712 PADI6Q6TGC4 694 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 KCNK18Q7Z418 384 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 ECHDC2Q86YB7 292 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 HSCBQ8IWL3 235 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 EXOC8Q8IYI6 725 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 LPPQ93052 612 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 SNX21Q969T3 373 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 INTS4Q96HW7 963 aaKnown RBP11.53□□□□□ -0.56
SNX6-208ENST00000556712 SAMD11Q96NU1 681 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 NACC1Q96RE7 527 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 RAB34Q9BZG1 259 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 INO80BQ9C086 356 aaPredicted RBP11.53□□□□□ -0.56
SNX6-208ENST00000556712 BHMT2Q9H2M3 363 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 POLD4Q9HCU8 107 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 AGPAT5Q9NUQ2 364 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 TMEM161AQ9NX61 479 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 MTMR6Q9Y217 621 aa11.53□□□□□ -0.56
SNX6-208ENST00000556712 SPTBN5Q9NRC6 3674 aaKnown RBP11.52□□□□□ -0.56
SNX6-208ENST00000556712 MEIS3P2A8K0S8 358 aa11.52□□□□□ -0.57
SNX6-208ENST00000556712 BMPR1AP36894 532 aa11.52□□□□□ -0.57
SNX6-208ENST00000556712 FAM189BP81408 668 aa11.52□□□□□ -0.57
SNX6-208ENST00000556712 GRIN1Q05586 938 aa11.52□□□□□ -0.57
SNX6-208ENST00000556712 MBTD1Q05BQ5 628 aa11.52□□□□□ -0.57
SNX6-208ENST00000556712 PDIA5Q14554 519 aa11.52□□□□□ -0.57
SNX6-208ENST00000556712 SF3A1Q15459 793 aaKnown RBP11.52□□□□□ -0.57
SNX6-208ENST00000556712 SKIV2LQ15477 1246 aaKnown RBP11.52□□□□□ -0.57
SNX6-208ENST00000556712 KRT79Q5XKE5 535 aa11.52□□□□□ -0.57
SNX6-208ENST00000556712 BRAPQ7Z569 592 aa11.52□□□□□ -0.57
SNX6-208ENST00000556712 SRGAP1Q7Z6B7 1085 aa11.52□□□□□ -0.57
SNX6-208ENST00000556712 SPRYD3Q8NCJ5 442 aa11.52□□□□□ -0.57
SNX6-208ENST00000556712 HELQQ8TDG4 1101 aa11.52□□□□□ -0.57
SNX6-208ENST00000556712 BSNDQ8WZ55 320 aa11.52□□□□□ -0.57
SNX6-208ENST00000556712 CLP1Q92989 425 aaKnown RBP11.52□□□□□ -0.57
SNX6-208ENST00000556712 CPB2Q96IY4 423 aa11.52□□□□□ -0.57
SNX6-208ENST00000556712 PLIN2Q99541 437 aa11.52□□□□□ -0.57
SNX6-208ENST00000556712 ELAC1Q9H777 363 aaKnown RBP11.52□□□□□ -0.57
SNX6-208ENST00000556712 UNC80Q8N2C7 3258 aa11.52□□□□□ -0.57
SNX6-208ENST00000556712 MYH11P35749 1972 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 A0A0U1RQF3 1178 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 LRRIQ4A6NIV6 560 aa11.51□□□□□ -0.57
SNX6-208ENST00000556712 C5orf67F2Z3F1 127 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms