RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 ZC3H11AO75152 810 aaKnown RBP eCLIP4.95□□□□□ -1.62
ATXN3-242ENST00000556644 EIF3JO75822 258 aaKnown RBP4.95□□□□□ -1.62
ATXN3-242ENST00000556644 WISP1O95388 367 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 NR3C2P08235 984 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 CNPP09543 421 aaKnown RBP4.95□□□□□ -1.62
ATXN3-242ENST00000556644 TSPY3P0CV98 308 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 TSPY8P0CW00 308 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 CCDC192P0DO97 292 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 CTSAP10619 480 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 KRT10P13645 584 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 CNR2P34972 360 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 RAP1GAPP47736 663 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 BCAR1P56945 870 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 FAM193AP78312 1265 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 PFKPQ01813 784 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 CREB5Q02930 508 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 GRIK4Q16099 956 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 CLLU1OSQ5K130 101 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 RSPO2Q6UXX9 243 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-242ENST00000556644 Q6ZS52 159 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 SLC24A5Q71RS6 500 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 PPFIBP1Q86W92 1011 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 PLEKHM2Q8IWE5 1019 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 ABI1Q8IZP0 508 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 ZNF444Q8N0Y2 327 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-242ENST00000556644 ZNF687Q8N1G0 1237 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 IL31RAQ8NI17 732 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 PHKBQ93100 1093 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 RNF166Q96A37 237 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-242ENST00000556644 EAF2Q96CJ1 260 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-242ENST00000556644 NELL2Q99435 816 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 VN1R3Q9BXE9 311 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 TRIM4Q9C037 500 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 BCL11AQ9H165 835 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 CPVLQ9H3G5 476 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 TMEM161AQ9NX61 479 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.95□□□□□ -1.62
ATXN3-242ENST00000556644 ARPP21Q9UBL0 812 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-242ENST00000556644 ZNF215Q9UL58 517 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-242ENST00000556644 NOC2LQ9Y3T9 749 aaKnown RBP4.95□□□□□ -1.62
ATXN3-242ENST00000556644 PAXBP1Q9Y5B6 917 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 IGSF9BQ9UPX0 1349 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 ASCC3Q8N3C0 2202 aaKnown RBP4.95□□□□□ -1.62
ATXN3-242ENST00000556644 M0QZ92 97 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 CDX4O14627 284 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-242ENST00000556644 RPP40O75818 363 aaKnown RBP4.94□□□□□ -1.62
ATXN3-242ENST00000556644 FSHRP23945 695 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 ITPKBP27987 946 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 ABCG1P45844 678 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 MAPK8P45983 427 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 CCR10P46092 362 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 EMP3P54852 163 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 TFAP4Q01664 338 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 MTX1Q13505 466 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 GRM2Q14416 872 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 MARCH8Q5T0T0 291 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 IER5Q5VY09 327 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 CYFIP1Q7L576 1253 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 CACNA2D4Q7Z3S7 1137 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 MARCH9Q86YJ5 346 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 PNPLA1Q8N8W4 532 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 CMASQ8NFW8 434 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-242ENST00000556644 NEDD1Q8NHV4 660 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 HELQQ8TDG4 1101 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 TRAPPC12Q8WVT3 735 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 TMEM40Q8WWA1 233 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 GAB3Q8WWW8 586 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 LOXL4Q96JB6 756 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 IWS1Q96ST2 819 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 PHF20Q9BVI0 1012 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 EMILIN2Q9BXX0 1053 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 CELF4Q9BZC1 486 aaKnown RBP4.94□□□□□ -1.62
ATXN3-242ENST00000556644 ADAMTS10Q9H324 1103 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 CDHR5Q9HBB8 845 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 PXMP2Q9NR77 195 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 RGS18Q9NS28 235 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 C1orf112Q9NSG2 853 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 SYNPO2Q9UMS6 1093 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 IRAK3Q9Y616 596 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 SPAG17Q6Q759 2223 aa4.94□□□□□ -1.62
ATXN3-242ENST00000556644 COL5A1P20908 1838 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-242ENST00000556644 FAM221BA6H8Z2 402 aa4.93□□□□□ -1.62
ATXN3-242ENST00000556644 DCLK1O15075 740 aa4.93□□□□□ -1.62
ATXN3-242ENST00000556644 SLC28A2O43868 658 aa4.93□□□□□ -1.62
ATXN3-242ENST00000556644 LILRB3O75022 631 aa4.93□□□□□ -1.62
ATXN3-242ENST00000556644 RPS6KA5O75582 802 aa4.93□□□□□ -1.62
ATXN3-242ENST00000556644 SURF6O75683 361 aaKnown RBP4.93□□□□□ -1.62
ATXN3-242ENST00000556644 CAVIN2O95810 425 aa4.93□□□□□ -1.62
ATXN3-242ENST00000556644 GLUD1P00367 558 aa4.93□□□□□ -1.62
ATXN3-242ENST00000556644 LAMA1P25391 3075 aa4.93□□□□□ -1.62
ATXN3-242ENST00000556644 ADD2P35612 726 aa4.93□□□□□ -1.62
ATXN3-242ENST00000556644 ALDH7A1P49419 539 aaKnown RBP4.93□□□□□ -1.62
ATXN3-242ENST00000556644 AK2P54819 239 aa4.93□□□□□ -1.62
ATXN3-242ENST00000556644 TTF1Q15361 905 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-242ENST00000556644 LONRF3Q496Y0 759 aa4.93□□□□□ -1.62
ATXN3-242ENST00000556644 TMED8Q6PL24 325 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-242ENST00000556644 PCSK4Q6UW60 755 aa4.93□□□□□ -1.62
ATXN3-242ENST00000556644 MTSS1LQ765P7 747 aa4.93□□□□□ -1.62
ATXN3-242ENST00000556644 GRASPQ7Z6J2 395 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-242ENST00000556644 RAB44Q7Z6P3 723 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms