RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 EFCAB12Q6NXP0 572 aa8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 MOXD1Q6UVY6 613 aa8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 TREML4Q6UXN2 200 aa8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 CMTR2Q8IYT2 770 aaKnown RBP8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 KIAA0319LQ8IZA0 1049 aa8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 CRIPAKQ8N1N5 446 aa8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 BANK1Q8NDB2 785 aa8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 RDM1Q8NG50 284 aa8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 SLC5A5Q92911 643 aa8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 LENG9Q96B70 501 aa8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 ZNF689Q96CS4 500 aaPredicted RBP8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 SCLT1Q96NL6 688 aa8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 PPP1R16BQ96T49 567 aa8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 NAP1L4Q99733 375 aaKnown RBP8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 UNC45AQ9H3U1 944 aa8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 UBE2ZQ9H832 354 aaPredicted RBP8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 C1orf112Q9NSG2 853 aa8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 DDX25Q9UHL0 483 aaKnown RBP8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 KCNJ14Q9UNX9 436 aa8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 NOC2LQ9Y3T9 749 aaKnown RBP8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 PCDHB7Q9Y5E2 793 aa8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 PRRC2BQ5JSZ5 2229 aaKnown RBP8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 TTC3P53804 2025 aa8.66□□□□□ -1.02
HNRNPC-226ENST00000556628 CYP3A7-CYP3A51PA0A087WV96 503 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 ZBTB42B2RXF5 422 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 C5orf67F2Z3F1 127 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 DKC1O60832 514 aaKnown RBP eCLIP8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 TDP2O95551 362 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 C22orf31O95567 290 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 VTNP04004 478 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 BMP1P13497 986 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 GCFC2P16383 781 aaKnown RBP8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 ZSCAN20P17040 1043 aaPredicted RBP8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 CYP3A7P24462 503 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 GCGRP47871 477 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 SARSP49591 514 aaKnown RBP8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 DNM2P50570 870 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 KCNQ1P51787 676 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 AK2P54819 239 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 NLRP11P59045 1033 aaKnown RBP8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 PRKCEQ02156 737 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 INF2Q27J81 1249 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 PAN2Q504Q3 1202 aaKnown RBP8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 NAALADL2Q58DX5 795 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 XKR3Q5GH77 459 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 EP400NLQ6ZTU2 488 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 SLC24A5Q71RS6 500 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 NEK8Q86SG6 692 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 RTN4RL1Q86UN2 441 aaPredicted RBP8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 LINC01599Q8WXQ3 324 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 PPP2R3CQ969Q6 453 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 AIFM3Q96NN9 605 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 OSMRQ99650 979 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 ADAM2Q99965 735 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 PHF20Q9BVI0 1012 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 PLVAPQ9BX97 442 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 NSUN3Q9H649 340 aaKnown RBP8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 ERVK-5Q9HDB9 667 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 ORC3Q9UBD5 711 aaPredicted RBP8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 ST3GAL5Q9UNP4 418 aa8.65□□□□□ -1.02
HNRNPC-226ENST00000556628 KIAA1671Q9BY89 1806 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 M0R2N6 131 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 NCK2O43639 380 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 ZNF862O60290 1169 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 CCNT1O60563 726 aaKnown RBP8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 PSMD10O75832 226 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 BAG4O95429 457 aaKnown RBP8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 KCNA5P22460 613 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 CLCN3P51790 818 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 CDC42EP1Q00587 391 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 TRIM29Q14134 588 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 MTERF2Q49AM1 385 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 TCEAL5Q5H9L2 206 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 FAM228AQ86W67 206 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 CLP1Q92989 425 aaKnown RBP8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 P2RX5Q93086 422 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 MBOAT7Q96N66 472 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 JPH2Q9BR39 696 aaPredicted RBP8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 TMX1Q9H3N1 280 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 RC3H2Q9HBD1 1191 aaKnown RBP8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 ATP6V0A4Q9HBG4 840 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 RGS18Q9NS28 235 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 TPCN1Q9ULQ1 816 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 FAM50BQ9Y247 325 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 FCF1Q9Y324 198 aaKnown RBP8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 CDH23Q9H251 3354 aa8.64□□□□□ -1.03
HNRNPC-226ENST00000556628 CHD9Q3L8U1 2897 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 TBKBP1A7MCY6 615 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 GRM6O15303 877 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 HOXA2O43364 376 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 EDIL3O43854 480 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 GPR32O75388 356 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 CSPG5O95196 566 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 AVPP01185 164 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 MMP1P03956 469 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 EIF4BP23588 611 aaKnown RBP8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 KRT2P35908 639 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 NEK4P51957 841 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 PSMC5P62195 406 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms