RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 KRT2P35908 639 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 MCAMP43121 646 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 GYG1P46976 350 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 HAND2P61296 217 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 GUCY1B3Q02153 619 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 PDE4BQ07343 736 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 DMTNQ08495 405 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 POSTNQ15063 836 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 AXDND1Q5T1B0 1012 aaPredicted RBP6.86□□□□□ -1.31
CPSF2-205ENST00000556622 MEI1Q5TIA1 1274 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 TTBK2Q6IQ55 1244 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 TMCO3Q6UWJ1 677 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 C11orf57Q6ZUT1 292 aaPredicted RBP6.86□□□□□ -1.31
CPSF2-205ENST00000556622 C15orf52Q6ZUT6 534 aaKnown RBP6.86□□□□□ -1.31
CPSF2-205ENST00000556622 IQUBQ8NA54 791 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 FANCBQ8NB91 859 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 AGBL5Q8NDL9 886 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 CTCFLQ8NI51 663 aaPredicted RBP6.86□□□□□ -1.31
CPSF2-205ENST00000556622 NOC3LQ8WTT2 800 aaKnown RBP6.86□□□□□ -1.31
CPSF2-205ENST00000556622 CCDC12Q8WUD4 166 aaPredicted RBP6.86□□□□□ -1.31
CPSF2-205ENST00000556622 DCPSQ96C86 337 aaKnown RBP6.86□□□□□ -1.31
CPSF2-205ENST00000556622 FAM84BQ96KN1 310 aaPredicted RBP6.86□□□□□ -1.31
CPSF2-205ENST00000556622 PKNOX2Q96KN3 472 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 PANX2Q96RD6 677 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 LZTS2Q9BRK4 669 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 SLC26A6Q9BXS9 759 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 XPO4Q9C0E2 1151 aaKnown RBP6.86□□□□□ -1.31
CPSF2-205ENST00000556622 GOLPH3LQ9H4A5 285 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 MAGEF1Q9HAY2 307 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 SH3GLB2Q9NR46 395 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 TOMM22Q9NS69 142 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 AATFQ9NY61 560 aaKnown RBP eCLIP6.86□□□□□ -1.31
CPSF2-205ENST00000556622 DNAI1Q9UI46 699 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 HDAC9Q9UKV0 1011 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 SLC4A4Q9Y6R1 1079 aa6.86□□□□□ -1.31
CPSF2-205ENST00000556622 A0A0U1RQG5 324 aaPredicted RBP6.85□□□□□ -1.31
CPSF2-205ENST00000556622 AP5Z1O43299 807 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 PRPF3O43395 683 aaKnown RBP6.85□□□□□ -1.31
CPSF2-205ENST00000556622 KIF5CO60282 957 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 CCDC175P0C221 793 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 IL1R1P14778 569 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 FGFR2P21802 821 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 CASQ1P31415 396 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 GSTO1P78417 241 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 CCZ1BP86790 482 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 CCZ1P86791 482 aaPredicted RBP6.85□□□□□ -1.31
CPSF2-205ENST00000556622 ORC2Q13416 577 aaPredicted RBP6.85□□□□□ -1.31
CPSF2-205ENST00000556622 CCDC85BQ15834 202 aaPredicted RBP6.85□□□□□ -1.31
CPSF2-205ENST00000556622 DPCR1Q3MIW9 517 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 DACT2Q5SW24 774 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 SPATA1Q5VX52 437 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 ARL6IP4Q66PJ3 421 aaKnown RBP6.85□□□□□ -1.31
CPSF2-205ENST00000556622 CHST3Q7LGC8 479 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 ZAR1Q86SH2 424 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 MICU3Q86XE3 530 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 KIAA0825Q8IV33 1275 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 VSTM4Q8IW00 320 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 DIS3L2Q8IYB7 885 aaKnown RBP6.85□□□□□ -1.31
CPSF2-205ENST00000556622 CRACR2BQ8N4Y2 399 aaPredicted RBP6.85□□□□□ -1.31
CPSF2-205ENST00000556622 MAGEB6Q8N7X4 407 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 CEP112Q8N8E3 955 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 VGLL2Q8N8G2 317 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 GAL3ST3Q96A11 431 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 FAM161BQ96MY7 647 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 BAG1Q99933 345 aaPredicted RBP6.85□□□□□ -1.31
CPSF2-205ENST00000556622 LRRC27Q9C0I9 530 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 CUEDC2Q9H467 287 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 LY9Q9HBG7 655 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 MYOZ2Q9NPC6 264 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 ATP8A2Q9NTI2 1148 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 ZSWIM5Q9P217 1185 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 PGAP2Q9UHJ9 254 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 DDX41Q9UJV9 622 aaKnown RBP6.85□□□□□ -1.31
CPSF2-205ENST00000556622 AP4E1Q9UPM8 1137 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 JAG2Q9Y219 1238 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 TAF6LQ9Y6J9 622 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 MYH7P12883 1935 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 LAMA4Q16363 1823 aa6.85□□□□□ -1.31
CPSF2-205ENST00000556622 LRRC37AA6NMS7 1700 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 POLR2AP24928 1970 aaKnown RBP6.84□□□□□ -1.31
CPSF2-205ENST00000556622 MYO3BQ8WXR4 1341 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 DUOX1Q9NRD9 1551 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 TCRBV5S4A2TA0A5A2 114 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 FAM170BA6NMN3 283 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 B4E1Z4 1266 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 AKR1B15C9JRZ8 316 aaPredicted RBP6.84□□□□□ -1.31
CPSF2-205ENST00000556622 F8W031 263 aaPredicted RBP6.84□□□□□ -1.31
CPSF2-205ENST00000556622 TRAF5O00463 557 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 FANCGO15287 622 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 EIF3JO75822 258 aaKnown RBP6.84□□□□□ -1.31
CPSF2-205ENST00000556622 MBD4O95243 580 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 IPO7O95373 1038 aaKnown RBP6.84□□□□□ -1.31
CPSF2-205ENST00000556622 FGFR1OPO95684 399 aaKnown RBP6.84□□□□□ -1.31
CPSF2-205ENST00000556622 LDHCP07864 332 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 ADORA1P30542 326 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 NTF4P34130 210 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 MMP14P50281 582 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 PLCD1P51178 756 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 RBM5P52756 815 aaKnown RBP eCLIP6.84□□□□□ -1.31
CPSF2-205ENST00000556622 ANTXR2P58335 489 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms