RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 SYT1P21579 422 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 SLURP1P55000 103 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 EIF6P56537 245 aaKnown RBP5.11□□□□□ -1.59
ATXN3-241ENST00000556374 SLC7A5Q01650 507 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 EFEMP1Q12805 493 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 ZRSR1Q15695 479 aaKnown RBP5.11□□□□□ -1.59
ATXN3-241ENST00000556374 ZYXQ15942 572 aaKnown RBP5.11□□□□□ -1.59
ATXN3-241ENST00000556374 ZNF394Q53GI3 561 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 LARP1BQ659C4 914 aaKnown RBP5.11□□□□□ -1.59
ATXN3-241ENST00000556374 CREB3L3Q68CJ9 461 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 HEATR6Q6AI08 1181 aaKnown RBP5.11□□□□□ -1.59
ATXN3-241ENST00000556374 KSR2Q6VAB6 950 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 B3GNT8Q7Z7M8 397 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 ARHGEF25Q86VW2 580 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 DRC7Q8IY82 874 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 TTC5Q8N0Z6 440 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 LINS1Q8NG48 757 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 FNIP1Q8TF40 1166 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 RAPGEF4Q8WZA2 1011 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 BRF1Q92994 677 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 TNMDQ9H2S6 317 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 STRIP2Q9ULQ0 834 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 PPT2Q9UMR5 302 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 FAN1Q9Y2M0 1017 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 BACE2Q9Y5Z0 518 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 ELP1O95163 1332 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 LTBP3Q9NS15 1303 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 SCN11AQ9UI33 1791 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 MYH15Q9Y2K3 1946 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 F8W031 263 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-241ENST00000556374 CAVIN2O95810 425 aa5.1□□□□□ -1.59
ATXN3-241ENST00000556374 TP53P04637 393 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-241ENST00000556374 CD3EP07766 207 aa5.1□□□□□ -1.59
ATXN3-241ENST00000556374 HMGB1P09429 215 aaKnown RBP5.1□□□□□ -1.59
ATXN3-241ENST00000556374 NBPF7P0C2Y1 421 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-241ENST00000556374 GJA8P48165 433 aa5.1□□□□□ -1.59
ATXN3-241ENST00000556374 TPM4P67936 248 aa5.1□□□□□ -1.59
ATXN3-241ENST00000556374 PRR5P85299 388 aa5.1□□□□□ -1.59
ATXN3-241ENST00000556374 GNPTABQ3T906 1256 aa5.1□□□□□ -1.59
ATXN3-241ENST00000556374 FBXW10Q5XX13 1052 aa5.1□□□□□ -1.59
ATXN3-241ENST00000556374 POMZP3Q6PJE2 187 aa5.1□□□□□ -1.59
ATXN3-241ENST00000556374 LIPIQ6XZB0 460 aa5.1□□□□□ -1.59
ATXN3-241ENST00000556374 LZTR1Q8N653 840 aa5.1□□□□□ -1.59
ATXN3-241ENST00000556374 MYRIPQ8NFW9 859 aa5.1□□□□□ -1.59
ATXN3-241ENST00000556374 FEZF2Q8TBJ5 459 aa5.1□□□□□ -1.59
ATXN3-241ENST00000556374 SEC16BQ96JE7 1060 aa5.1□□□□□ -1.59
ATXN3-241ENST00000556374 SPEF2Q9C093 1822 aa5.1□□□□□ -1.59
ATXN3-241ENST00000556374 DDX21Q9NR30 783 aaKnown RBP eCLIP5.1□□□□□ -1.59
ATXN3-241ENST00000556374 DBR1Q9UK59 544 aaKnown RBP5.1□□□□□ -1.59
ATXN3-241ENST00000556374 CASP8AP2Q9UKL3 1982 aa5.1□□□□□ -1.59
ATXN3-241ENST00000556374 CFAP45Q9UL16 551 aa5.1□□□□□ -1.59
ATXN3-241ENST00000556374 MED23Q9ULK4 1368 aa5.1□□□□□ -1.59
ATXN3-241ENST00000556374 PMF1-BGLAPU3KQ54 211 aa5.1□□□□□ -1.59
ATXN3-241ENST00000556374 SCN4AP35499 1836 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 ADAMTSL1Q8N6G6 1762 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 COL5A3P25940 1745 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-241ENST00000556374 PALLDQ8WX93 1383 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 A0A1W2PQH9 124 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 SLC27A2O14975 620 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 CTAGE5O15320 804 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 IFNGR1P15260 489 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 ATF2P15336 505 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 VEGFAP15692 232 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-241ENST00000556374 PAMP19021 973 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 RPS6KB1P23443 525 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 SEPHS1P49903 392 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 TGFB2P61812 414 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 AMPD2Q01433 879 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 DHX8Q14562 1220 aaKnown RBP5.09□□□□□ -1.59
ATXN3-241ENST00000556374 GIMAP6Q6P9H5 292 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 CCDC73Q6ZRK6 1079 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-241ENST00000556374 GPRASP2Q96D09 838 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 SUCLG2Q96I99 432 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 ZNF396Q96N95 335 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-241ENST00000556374 MMP19Q99542 508 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 ZSCAN16Q9H4T2 348 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-241ENST00000556374 GINM1Q9NU53 330 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 SUSD2Q9UGT4 822 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 MTMR6Q9Y217 621 aa5.09□□□□□ -1.59
ATXN3-241ENST00000556374 MEGF6O75095 1541 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 UTYO14607 1347 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 A0A0G2JLW4 131 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 ANKRD34BA5PLL1 514 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 C2orf71A6NGG8 1288 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 LARGE1O95461 756 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 RECKO95980 971 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 ANXA1P04083 346 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 ASGR2P07307 311 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 MMP10P09238 476 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 DPEP1P16444 411 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 NCKAP1LP55160 1127 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 PTH1RQ03431 593 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 AIMP1Q12904 312 aaKnown RBP5.08□□□□□ -1.6
ATXN3-241ENST00000556374 PAK2Q13177 524 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 NOLC1Q14978 699 aaKnown RBP eCLIP5.08□□□□□ -1.6
ATXN3-241ENST00000556374 NBPF6Q5VWK0 638 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 IQCEQ6IPM2 695 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 RUFY4Q6ZNE9 571 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 SMIM5Q71RC9 77 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms