RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 CCDC169A6NNP5 214 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 ACTN4O43707 911 aaKnown RBP8.44□□□□□ -1.06
TDP1-214ENST00000556063 GTPBP6O43824 516 aaPredicted RBP8.44□□□□□ -1.06
TDP1-214ENST00000556063 SMC2O95347 1197 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 PFKMP08237 780 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 CTSHP09668 335 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 SRGAP2CP0DJJ0 459 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 PLS3P13797 630 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 GLRA2P23416 452 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 EIF4BP23588 611 aaKnown RBP8.44□□□□□ -1.06
TDP1-214ENST00000556063 CYP2C18P33260 490 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 MCM4P33991 863 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 AFMP43652 599 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 GPC3P51654 580 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 EFNA5P52803 228 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 ASIC1P78348 528 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 MLLT1Q03111 559 aaPredicted RBP8.44□□□□□ -1.06
TDP1-214ENST00000556063 RAD51AP2Q09MP3 1159 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 TMEM62Q0P6H9 643 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 PPIGQ13427 754 aaKnown RBP eCLIP8.44□□□□□ -1.06
TDP1-214ENST00000556063 MKRN4PQ13434 485 aaPredicted RBP8.44□□□□□ -1.06
TDP1-214ENST00000556063 DRP2Q13474 957 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 GIT2Q14161 759 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 PCBP1Q15365 356 aaKnown RBP eCLIP8.44□□□□□ -1.06
TDP1-214ENST00000556063 KIZQ2M2Z5 673 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 ARSHQ5FYA8 562 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 ZNF618Q5T7W0 954 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 MFSD5Q6N075 450 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 CNNM4Q6P4Q7 775 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 STXBP4Q6ZWJ1 553 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 DYMQ7RTS9 669 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 SRGAP1Q7Z6B7 1085 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 SH3RF1Q7Z6J0 888 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 ELOA2Q8IYF1 753 aaPredicted RBP8.44□□□□□ -1.06
TDP1-214ENST00000556063 MYCT1Q8N699 235 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 RNF149Q8NC42 400 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 ENGASEQ8NFI3 743 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 SPIRE2Q8WWL2 714 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 ZBTB10Q96DT7 871 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 PAGE5Q96GU1 130 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 C7orf25Q9BPX7 421 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 REEP2Q9BRK0 252 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 GTPBP4Q9BZE4 634 aaKnown RBP8.44□□□□□ -1.06
TDP1-214ENST00000556063 TRIM9Q9C026 710 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 GPRC5CQ9NQ84 441 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 KMT5AQ9NQR1 393 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 LMBRD1Q9NUN5 540 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 A0A087WZ62 844 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.43□□□□□ -1.06
TDP1-214ENST00000556063 TRIM43BA6NCK2 446 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 GPR182O15218 404 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 GPR32O75388 356 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 NR1I2O75469 434 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 RPS6KA5O75582 802 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 ERLIN2O94905 339 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 CHRNA1P02708 482 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 ACTN1P12814 892 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 DARSP14868 501 aaKnown RBP8.43□□□□□ -1.06
TDP1-214ENST00000556063 LIG1P18858 919 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 SFPQP23246 707 aaKnown RBP eCLIP8.43□□□□□ -1.06
TDP1-214ENST00000556063 CCL23P55773 120 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 PEX3P56589 373 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 PTENP60484 403 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 FPGSQ05932 587 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 MAPK7Q13164 816 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 SNW1Q13573 536 aaKnown RBP8.43□□□□□ -1.06
TDP1-214ENST00000556063 ALCAMQ13740 583 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 POSTNQ15063 836 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 HERC4Q5GLZ8 1057 aaPredicted RBP8.43□□□□□ -1.06
TDP1-214ENST00000556063 TSHZ1Q6ZSZ6 1077 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 UNC13DQ70J99 1090 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 IFNLR1Q8IU57 520 aaPredicted RBP8.43□□□□□ -1.06
TDP1-214ENST00000556063 FAM178BQ8IXR5 827 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 ASAP3Q8TDY4 903 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 LRRC15Q8TF66 581 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 SEPT8Q92599 483 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 STAMQ92783 540 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 APBB2Q92870 758 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 WNT8BQ93098 351 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 TRIM43Q96BQ3 446 aaPredicted RBP8.43□□□□□ -1.06
TDP1-214ENST00000556063 OSMRQ99650 979 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 FDXACB1Q9BRP7 624 aaPredicted RBP8.43□□□□□ -1.06
TDP1-214ENST00000556063 NTPCRQ9BSD7 190 aaKnown RBP8.43□□□□□ -1.06
TDP1-214ENST00000556063 NFKBIZQ9BYH8 718 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 ADAMTS10Q9H324 1103 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 PANK4Q9NVE7 773 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 DACT1Q9NYF0 836 aa8.43□□□□□ -1.06
TDP1-214ENST00000556063 ZMYND8Q9ULU4 1186 aaPredicted RBP8.43□□□□□ -1.06
TDP1-214ENST00000556063 NPHP3-ACAD11A0A0J9YXS1 232 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 SFI1A8K8P3 1242 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 INO80B-WBP1J3KQ70 363 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 K7ERI5 159 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 TRAK2O60296 914 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 EFCAB14O75071 495 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 MAPTP10636 758 aaKnown RBP8.42□□□□□ -1.06
TDP1-214ENST00000556063 GHRP10912 638 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 SYN1P17600 705 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 NPTX2P47972 431 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 ZNF131P52739 623 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 MGAT3Q09327 533 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms