RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 HDAC6Q9UBN7 1215 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 OGDHLQ9ULD0 1010 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 PHF24Q9UPV7 400 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 GDAQ9Y2T3 454 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 PCDHA2Q9Y5H9 948 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 A0A1W2PQ45 241 aaPredicted RBP12.17□□□□□ -0.46
TMEM260-208ENST00000555905 A0A1W2PQY0 241 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 MBLAC1A4D2B0 266 aaPredicted RBP12.17□□□□□ -0.46
TMEM260-208ENST00000555905 K7ENM7 598 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 PSMA7O14818 248 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 ASAP2O43150 1006 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 GCNT3O95395 438 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 SGPL1O95470 568 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 GJB1P08034 283 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 SCP2P22307 547 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 ABCD1P33897 745 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 PRCPP42785 496 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 NPTX2P47972 431 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 ZNF165P49910 485 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 PTPN11Q06124 597 aaPredicted RBP12.17□□□□□ -0.46
TMEM260-208ENST00000555905 ITGA7Q13683 1181 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 TFDP1Q14186 410 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 MARCH8Q5T0T0 291 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 C11orf57Q6ZUT1 292 aaPredicted RBP12.17□□□□□ -0.46
TMEM260-208ENST00000555905 SESTD1Q86VW0 696 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 MYOCDQ8IZQ8 938 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 ADSSL1Q8N142 457 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 GUF1Q8N442 669 aaKnown RBP12.17□□□□□ -0.46
TMEM260-208ENST00000555905 ASAP3Q8TDY4 903 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 STARD7Q9NQZ5 370 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 GTF2IRD1Q9UHL9 959 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 MAPK8IP1Q9UQF2 711 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 AKT3Q9Y243 479 aa12.17□□□□□ -0.46
TMEM260-208ENST00000555905 UBE4BO95155 1302 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 A0A0U1RQG5 324 aaPredicted RBP12.16□□□□□ -0.46
TMEM260-208ENST00000555905 SMIM35A0A1B0GVV1 85 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 LRRIQ4A6NIV6 560 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 PPP1R3GB7ZBB8 358 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 EIF3DO15371 548 aaKnown RBP eCLIP12.16□□□□□ -0.46
TMEM260-208ENST00000555905 SLC16A4O15374 487 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 MYBP10242 640 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 CYP2C9P11712 490 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 GLRA2P23416 452 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 ERCC5P28715 1186 aaPredicted RBP12.16□□□□□ -0.46
TMEM260-208ENST00000555905 NMT1P30419 496 aaKnown RBP12.16□□□□□ -0.46
TMEM260-208ENST00000555905 HOXC8P31273 242 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 NAMPTP43490 491 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 CLCN3P51790 818 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 NCKAP1LP55160 1127 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 CDC42EP1Q00587 391 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 LAMTOR4Q0VGL1 99 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 PAK1Q13153 545 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 KLHL10Q6JEL2 608 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 ZNF720Q7Z2F6 126 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 RHPN2Q8IUC4 686 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 DEPTORQ8TB45 409 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 U2AF1L4Q8WU68 220 aaKnown RBP12.16□□□□□ -0.46
TMEM260-208ENST00000555905 PPP1R13LQ8WUF5 828 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 BSNDQ8WZ55 320 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 ZBTB10Q96DT7 871 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 DHTKD1Q96HY7 919 aaPredicted RBP12.16□□□□□ -0.46
TMEM260-208ENST00000555905 BPIFA3Q9BQP9 254 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 NTPCRQ9BSD7 190 aaKnown RBP12.16□□□□□ -0.46
TMEM260-208ENST00000555905 TMEM106CQ9BVX2 250 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 SEZ6LQ9BYH1 1024 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 CRISPLD2Q9H0B8 497 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 CTNND2Q9UQB3 1225 aa12.16□□□□□ -0.46
TMEM260-208ENST00000555905 TRIP12Q14669 1992 aaPredicted RBP12.16□□□□□ -0.46
TMEM260-208ENST00000555905 BICDL2A1A5D9 508 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 TREHO43280 583 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 RPLP2P05387 115 aaKnown RBP12.15□□□□□ -0.46
TMEM260-208ENST00000555905 SRGAP2CP0DJJ0 459 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 CAPN2P17655 700 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 CASP5P51878 434 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 ADAM17P78536 824 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 DRP2Q13474 957 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 ASTLQ6HA08 431 aaPredicted RBP12.15□□□□□ -0.46
TMEM260-208ENST00000555905 GDF6Q6KF10 455 aaPredicted RBP12.15□□□□□ -0.46
TMEM260-208ENST00000555905 TAF2Q6P1X5 1199 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 EPM2AIP1Q7L775 607 aaPredicted RBP12.15□□□□□ -0.46
TMEM260-208ENST00000555905 HAUS6Q7Z4H7 955 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 KIAA0319LQ8IZA0 1049 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 ZNF710Q8N1W2 664 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 LINC01465Q8N7H1 131 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 FAM200AQ8TCP9 573 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 SCFD1Q8WVM8 642 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 NELFBQ8WX92 580 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 HVCN1Q96D96 273 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 SCLT1Q96NL6 688 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 FIZ1Q96SL8 496 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 TSG101Q99816 390 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 FGFBP2Q9BYJ0 223 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 MCOLN1Q9GZU1 580 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 FAM49AQ9H0Q0 323 aaPredicted RBP12.15□□□□□ -0.46
TMEM260-208ENST00000555905 C2orf40Q9H1Z8 148 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 ST6GALNAC4Q9H4F1 302 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 RWDD2AQ9UIY3 292 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 PCDHB8Q9UN66 801 aa12.15□□□□□ -0.46
TMEM260-208ENST00000555905 GRIN2DO15399 1336 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 PHLPP2Q6ZVD8 1323 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms