RNA–Protein interactions for RNA: ENST00000555780.1

PCNX1-210, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 384 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-210ENST00000555780 TOP1MTQ969P6 601 aa7.55□□□□□ -1.2
PCNX1-210ENST00000555780 ZFRQ96KR1 1074 aaKnown RBP7.55□□□□□ -1.2
PCNX1-210ENST00000555780 CEP170P1Q96L14 293 aa7.55□□□□□ -1.2
PCNX1-210ENST00000555780 CLIC6Q96NY7 704 aa7.55□□□□□ -1.2
PCNX1-210ENST00000555780 FDXACB1Q9BRP7 624 aaPredicted RBP7.55□□□□□ -1.2
PCNX1-210ENST00000555780 IFIH1Q9BYX4 1025 aaKnown RBP7.55□□□□□ -1.2
PCNX1-210ENST00000555780 ANKEF1Q9NU02 776 aa7.55□□□□□ -1.2
PCNX1-210ENST00000555780 SUCLA2Q9P2R7 463 aaPredicted RBP7.55□□□□□ -1.2
PCNX1-210ENST00000555780 LRWD1Q9UFC0 647 aa7.55□□□□□ -1.2
PCNX1-210ENST00000555780 NOL7Q9UMY1 257 aaKnown RBP7.55□□□□□ -1.2
PCNX1-210ENST00000555780 ST3GAL5Q9UNP4 418 aa7.55□□□□□ -1.2
PCNX1-210ENST00000555780 USP20Q9Y2K6 914 aa7.55□□□□□ -1.2
PCNX1-210ENST00000555780 SLC4A7Q9Y6M7 1214 aa7.55□□□□□ -1.2
PCNX1-210ENST00000555780 SPTBN5Q9NRC6 3674 aaKnown RBP7.54□□□□□ -1.2
PCNX1-210ENST00000555780 A0A087X0B3 334 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 ABHD14A-ACY1A0A1B0GW23 586 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 VWA3AA6NCI4 1184 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 MEIS3P2A8K0S8 358 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 C9IYK1 514 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 BAIAP3O94812 1187 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 GJB5O95377 273 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 PARNO95453 639 aaKnown RBP7.54□□□□□ -1.2
PCNX1-210ENST00000555780 DARSP14868 501 aaKnown RBP7.54□□□□□ -1.2
PCNX1-210ENST00000555780 ATP2A2P16615 1042 aaKnown RBP7.54□□□□□ -1.2
PCNX1-210ENST00000555780 ATF7P17544 494 aaPredicted RBP7.54□□□□□ -1.2
PCNX1-210ENST00000555780 GLRA2P23416 452 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 DDIT3P35638 169 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 FAM189BP81408 668 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 HTRA4P83105 476 aaPredicted RBP7.54□□□□□ -1.2
PCNX1-210ENST00000555780 TAP1Q03518 808 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 TBC1D8BQ0IIM8 1120 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 MAPK7Q13164 816 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 GNL2Q13823 731 aaKnown RBP7.54□□□□□ -1.2
PCNX1-210ENST00000555780 IKBKEQ14164 716 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 EMC2Q15006 297 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 AMHR2Q16671 573 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 TMEM119Q4V9L6 283 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 HYIQ5T013 277 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 IER5Q5VY09 327 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 BRAPQ7Z569 592 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 PHOSPHO2Q8TCD6 241 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 SEPT8Q92599 483 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 TIFAQ96CG3 184 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 ZNF689Q96CS4 500 aaPredicted RBP7.54□□□□□ -1.2
PCNX1-210ENST00000555780 PLIN2Q99541 437 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 CERS4Q9HA82 394 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 TUFT1Q9NNX1 390 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 BLOC1S4Q9NUP1 217 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 TFIP11Q9UBB9 837 aaKnown RBP7.54□□□□□ -1.2
PCNX1-210ENST00000555780 DBR1Q9UK59 544 aaKnown RBP7.54□□□□□ -1.2
PCNX1-210ENST00000555780 CEP131Q9UPN4 1083 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 GINS2Q9Y248 185 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 SQORQ9Y6N5 450 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 WDR81Q562E7 1941 aa7.54□□□□□ -1.2
PCNX1-210ENST00000555780 NPHP3-ACAD11A0A0J9YXS1 232 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 PPP1R3GB7ZBB8 358 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 LPXNO60711 386 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 RPS6KA5O75582 802 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 UPP2O95045 317 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 BRD1O95696 1058 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 CA3P07451 260 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 XRCC6P12956 609 aaKnown RBP eCLIP7.53□□□□□ -1.2
PCNX1-210ENST00000555780 EIF4BP23588 611 aaKnown RBP7.53□□□□□ -1.2
PCNX1-210ENST00000555780 MARCKSP29966 332 aaPredicted RBP7.53□□□□□ -1.2
PCNX1-210ENST00000555780 HOXA11P31270 313 aaPredicted RBP7.53□□□□□ -1.2
PCNX1-210ENST00000555780 CCT6AP40227 531 aaKnown RBP7.53□□□□□ -1.2
PCNX1-210ENST00000555780 CEBPZQ03701 1054 aaKnown RBP7.53□□□□□ -1.2
PCNX1-210ENST00000555780 LAMTOR4Q0VGL1 99 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 NFX1Q12986 1120 aaKnown RBP7.53□□□□□ -1.2
PCNX1-210ENST00000555780 CAPSQ13938 189 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 NAALADL2Q58DX5 795 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 ARSHQ5FYA8 562 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 UBXN11Q5T124 520 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 DTHD1Q6ZMT9 781 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 MAEAQ7L5Y9 396 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 RSPH3Q86UC2 560 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 LAPTM4BQ86VI4 370 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 RHPN2Q8IUC4 686 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 HSCBQ8IWL3 235 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 MYOCDQ8IZQ8 938 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 DEFB123Q8N688 67 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 NEK9Q8TD19 979 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 SNX29Q8TEQ0 813 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 MYLIPQ8WY64 445 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 EPSTI1Q96J88 318 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 SLC9A7Q96T83 725 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 CDX2Q99626 313 aaPredicted RBP7.53□□□□□ -1.2
PCNX1-210ENST00000555780 RUSC1Q9BVN2 902 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 CSRNP2Q9H175 543 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 ZNF576Q9H609 170 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 DDX19AQ9NUU7 478 aaKnown RBP7.53□□□□□ -1.2
PCNX1-210ENST00000555780 TCEAL9Q9UHQ7 104 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 KIAA1024Q9UPX6 916 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 AKT3Q9Y243 479 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 KIF3AQ9Y496 699 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 PCDHA11Q9Y5I1 949 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 EYSQ5T1H1 3165 aa7.53□□□□□ -1.2
PCNX1-210ENST00000555780 ADGRA3Q8IWK6 1321 aa7.52□□□□□ -1.2
PCNX1-210ENST00000555780 LINC01553A4QN01 128 aa7.52□□□□□ -1.21
PCNX1-210ENST00000555780 LAD1O00515 517 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms