RNA–Protein interactions for RNA: ENST00000555677.5

IFT43-211, Transcript of intraflagellar transport 43, humanhuman

TSL 4

Gene IFT43, Length 487 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-211ENST00000555677 TCP11Q8WWU5 503 aa16.81■□□□□ 0.28
IFT43-211ENST00000555677 PSPC1Q8WXF1 523 aaKnown RBP16.81■□□□□ 0.28
IFT43-211ENST00000555677 MRPL38Q96DV4 380 aaKnown RBP16.81■□□□□ 0.28
IFT43-211ENST00000555677 MTRQ99707 1265 aa16.81■□□□□ 0.28
IFT43-211ENST00000555677 POLR3CQ9BUI4 534 aaPredicted RBP16.81■□□□□ 0.28
IFT43-211ENST00000555677 TUFT1Q9NNX1 390 aa16.81■□□□□ 0.28
IFT43-211ENST00000555677 XPNPEP1Q9NQW7 623 aa16.81■□□□□ 0.28
IFT43-211ENST00000555677 CHST12Q9NRB3 414 aa16.81■□□□□ 0.28
IFT43-211ENST00000555677 THEGQ9P2T0 379 aa16.81■□□□□ 0.28
IFT43-211ENST00000555677 SMC3Q9UQE7 1217 aa16.81■□□□□ 0.28
IFT43-211ENST00000555677 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.81■□□□□ 0.28
IFT43-211ENST00000555677 A0A0U1RQF3 1178 aa16.8■□□□□ 0.28
IFT43-211ENST00000555677 TBKBP1A7MCY6 615 aa16.8■□□□□ 0.28
IFT43-211ENST00000555677 GAS2O43903 313 aaKnown RBP16.8■□□□□ 0.28
IFT43-211ENST00000555677 FGFR1P11362 822 aa16.8■□□□□ 0.28
IFT43-211ENST00000555677 RPA1P27694 616 aa16.8■□□□□ 0.28
IFT43-211ENST00000555677 FERMT3Q86UX7 667 aa16.8■□□□□ 0.28
IFT43-211ENST00000555677 PLVAPQ9BX97 442 aa16.8■□□□□ 0.28
IFT43-211ENST00000555677 COL25A1Q9BXS0 654 aaPredicted RBP16.8■□□□□ 0.28
IFT43-211ENST00000555677 ATP6V0A4Q9HBG4 840 aa16.8■□□□□ 0.28
IFT43-211ENST00000555677 GTF3C3Q9Y5Q9 886 aa16.8■□□□□ 0.28
IFT43-211ENST00000555677 VCANP13611 3396 aa16.79■□□□□ 0.28
IFT43-211ENST00000555677 H3BQV1 296 aa16.79■□□□□ 0.28
IFT43-211ENST00000555677 GRM6O15303 877 aa16.79■□□□□ 0.28
IFT43-211ENST00000555677 DGAT1O75907 488 aa16.79■□□□□ 0.28
IFT43-211ENST00000555677 SFPQP23246 707 aaKnown RBP eCLIP16.79■□□□□ 0.28
IFT43-211ENST00000555677 FXR2P51116 673 aaKnown RBP eCLIP16.79■□□□□ 0.28
IFT43-211ENST00000555677 PDIA5Q14554 519 aa16.79■□□□□ 0.28
IFT43-211ENST00000555677 PTPROQ16827 1216 aa16.79■□□□□ 0.28
IFT43-211ENST00000555677 LARP1BQ659C4 914 aaKnown RBP16.79■□□□□ 0.28
IFT43-211ENST00000555677 P2RX5Q93086 422 aa16.79■□□□□ 0.28
IFT43-211ENST00000555677 CASD1Q96PB1 797 aa16.79■□□□□ 0.28
IFT43-211ENST00000555677 ASB2Q96Q27 587 aa16.79■□□□□ 0.28
IFT43-211ENST00000555677 C11orf84Q9BUA3 381 aaPredicted RBP16.79■□□□□ 0.28
IFT43-211ENST00000555677 MINDY3Q9H8M7 445 aa16.79■□□□□ 0.28
IFT43-211ENST00000555677 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.79■□□□□ 0.28
IFT43-211ENST00000555677 RNF19AQ9NV58 838 aa16.79■□□□□ 0.28
IFT43-211ENST00000555677 DACT1Q9NYF0 836 aa16.79■□□□□ 0.28
IFT43-211ENST00000555677 PLAGL2Q9UPG8 496 aa16.79■□□□□ 0.28
IFT43-211ENST00000555677 EOMESO95936 686 aa16.78■□□□□ 0.28
IFT43-211ENST00000555677 MRPS5P82675 430 aaKnown RBP16.78■□□□□ 0.28
IFT43-211ENST00000555677 TFF2Q03403 129 aa16.78■□□□□ 0.28
IFT43-211ENST00000555677 CUL4AQ13619 759 aa16.78■□□□□ 0.28
IFT43-211ENST00000555677 MXD4Q14582 209 aaPredicted RBP16.78■□□□□ 0.28
IFT43-211ENST00000555677 IL17AQ16552 155 aa16.78■□□□□ 0.28
IFT43-211ENST00000555677 NAALADL2Q58DX5 795 aa16.78■□□□□ 0.28
IFT43-211ENST00000555677 CATSPER4Q7RTX7 472 aa16.78■□□□□ 0.28
IFT43-211ENST00000555677 SRGAP1Q7Z6B7 1085 aa16.78■□□□□ 0.28
IFT43-211ENST00000555677 ZNF598Q86UK7 904 aaKnown RBP16.78■□□□□ 0.28
IFT43-211ENST00000555677 RNF149Q8NC42 400 aa16.78■□□□□ 0.28
IFT43-211ENST00000555677 ERMNQ8TAM6 284 aa16.78■□□□□ 0.28
IFT43-211ENST00000555677 NACC1Q96RE7 527 aa16.78■□□□□ 0.28
IFT43-211ENST00000555677 TRAIPQ9BWF2 469 aa16.78■□□□□ 0.28
IFT43-211ENST00000555677 CWH43Q9H720 699 aa16.78■□□□□ 0.28
IFT43-211ENST00000555677 ALG13Q9NP73 1137 aaKnown RBP16.78■□□□□ 0.28
IFT43-211ENST00000555677 TYW1Q9NV66 732 aaKnown RBP16.78■□□□□ 0.28
IFT43-211ENST00000555677 DBR1Q9UK59 544 aaKnown RBP16.78■□□□□ 0.28
IFT43-211ENST00000555677 ATF7P17544 494 aaPredicted RBP16.77■□□□□ 0.28
IFT43-211ENST00000555677 ARL2P36404 184 aa16.77■□□□□ 0.28
IFT43-211ENST00000555677 PHKA2P46019 1235 aa16.77■□□□□ 0.28
IFT43-211ENST00000555677 ECM1Q16610 540 aa16.77■□□□□ 0.28
IFT43-211ENST00000555677 RILPL1Q5EBL4 403 aa16.77■□□□□ 0.28
IFT43-211ENST00000555677 TJAP1Q5JTD0 557 aa16.77■□□□□ 0.28
IFT43-211ENST00000555677 POTEGQ6S5H5 508 aa16.77■□□□□ 0.28
IFT43-211ENST00000555677 LRRC55Q6ZSA7 311 aa16.77■□□□□ 0.28
IFT43-211ENST00000555677 IGSF22Q8N9C0 903 aa16.77■□□□□ 0.28
IFT43-211ENST00000555677 KLHL23Q8NBE8 558 aa16.77■□□□□ 0.28
IFT43-211ENST00000555677 SPPL3Q8TCT6 385 aa16.77■□□□□ 0.28
IFT43-211ENST00000555677 HLA-CQ95604 372 aa16.77■□□□□ 0.28
IFT43-211ENST00000555677 CCDC43Q96MW1 224 aaKnown RBP16.77■□□□□ 0.28
IFT43-211ENST00000555677 HCSTQ9UBK5 93 aa16.77■□□□□ 0.28
IFT43-211ENST00000555677 LRWD1Q9UFC0 647 aa16.77■□□□□ 0.28
IFT43-211ENST00000555677 COG5Q9UP83 839 aa16.77■□□□□ 0.28
IFT43-211ENST00000555677 PIN4Q9Y237 131 aaKnown RBP16.77■□□□□ 0.28
IFT43-211ENST00000555677 LAD1O00515 517 aa16.76■□□□□ 0.27
IFT43-211ENST00000555677 HOXA2O43364 376 aa16.76■□□□□ 0.27
IFT43-211ENST00000555677 ITGB1P05556 798 aa16.76■□□□□ 0.27
IFT43-211ENST00000555677 MUTP22033 750 aa16.76■□□□□ 0.27
IFT43-211ENST00000555677 DNAJB1P25685 340 aa16.76■□□□□ 0.27
IFT43-211ENST00000555677 POU5F1BQ06416 359 aa16.76■□□□□ 0.27
IFT43-211ENST00000555677 CAMK1Q14012 370 aa16.76■□□□□ 0.27
IFT43-211ENST00000555677 CLLU1OSQ5K130 101 aa16.76■□□□□ 0.27
IFT43-211ENST00000555677 SPOUT1Q5T280 376 aaKnown RBP16.76■□□□□ 0.27
IFT43-211ENST00000555677 TWF2Q6IBS0 349 aaKnown RBP16.76■□□□□ 0.27
IFT43-211ENST00000555677 MAEAQ7L5Y9 396 aa16.76■□□□□ 0.27
IFT43-211ENST00000555677 RNF169Q8NCN4 708 aa16.76■□□□□ 0.27
IFT43-211ENST00000555677 ASAP3Q8TDY4 903 aa16.76■□□□□ 0.27
IFT43-211ENST00000555677 TMEM117Q9H0C3 514 aa16.76■□□□□ 0.27
IFT43-211ENST00000555677 LMAN2LQ9H0V9 348 aa16.76■□□□□ 0.27
IFT43-211ENST00000555677 AGPAT5Q9NUQ2 364 aa16.76■□□□□ 0.27
IFT43-211ENST00000555677 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.75■□□□□ 0.27
IFT43-211ENST00000555677 USO1O60763 962 aaKnown RBP16.75■□□□□ 0.27
IFT43-211ENST00000555677 GLRA2P23416 452 aa16.75■□□□□ 0.27
IFT43-211ENST00000555677 HOXA11P31270 313 aaPredicted RBP16.75■□□□□ 0.27
IFT43-211ENST00000555677 CCT6AP40227 531 aaKnown RBP16.75■□□□□ 0.27
IFT43-211ENST00000555677 PRPHP41219 470 aa16.75■□□□□ 0.27
IFT43-211ENST00000555677 PTENP60484 403 aa16.75■□□□□ 0.27
IFT43-211ENST00000555677 CAPSQ13938 189 aa16.75■□□□□ 0.27
IFT43-211ENST00000555677 TCEAL5Q5H9L2 206 aa16.75■□□□□ 0.27
IFT43-211ENST00000555677 HAUS3Q68CZ6 603 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms