RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 XRCC6P12956 609 aaKnown RBP eCLIP15.23■□□□□ 0.03
SNX6-203ENST00000555416 ATF7P17544 494 aaPredicted RBP15.23■□□□□ 0.03
SNX6-203ENST00000555416 POU3F3P20264 500 aaPredicted RBP15.23■□□□□ 0.03
SNX6-203ENST00000555416 SYT1P21579 422 aa15.23■□□□□ 0.03
SNX6-203ENST00000555416 ARL2P36404 184 aa15.23■□□□□ 0.03
SNX6-203ENST00000555416 CCT6AP40227 531 aaKnown RBP15.23■□□□□ 0.03
SNX6-203ENST00000555416 PRPHP41219 470 aa15.23■□□□□ 0.03
SNX6-203ENST00000555416 BTG3Q14201 252 aaPredicted RBP15.23■□□□□ 0.03
SNX6-203ENST00000555416 ODR4Q5SWX8 454 aa15.23■□□□□ 0.03
SNX6-203ENST00000555416 FAM173BQ6P4H8 233 aa15.23■□□□□ 0.03
SNX6-203ENST00000555416 MAEAQ7L5Y9 396 aa15.23■□□□□ 0.03
SNX6-203ENST00000555416 KCNK18Q7Z418 384 aa15.23■□□□□ 0.03
SNX6-203ENST00000555416 TMEM192Q8IY95 271 aa15.23■□□□□ 0.03
SNX6-203ENST00000555416 FIBCD1Q8N539 461 aa15.23■□□□□ 0.03
SNX6-203ENST00000555416 RNF149Q8NC42 400 aa15.23■□□□□ 0.03
SNX6-203ENST00000555416 FBXO22Q8NEZ5 403 aa15.23■□□□□ 0.03
SNX6-203ENST00000555416 INTS4Q96HW7 963 aaKnown RBP15.23■□□□□ 0.03
SNX6-203ENST00000555416 ATP6V0A4Q9HBG4 840 aa15.23■□□□□ 0.03
SNX6-203ENST00000555416 POLD4Q9HCU8 107 aa15.23■□□□□ 0.03
SNX6-203ENST00000555416 C1orf112Q9NSG2 853 aa15.23■□□□□ 0.03
SNX6-203ENST00000555416 DBR1Q9UK59 544 aaKnown RBP15.23■□□□□ 0.03
SNX6-203ENST00000555416 DGAT1O75907 488 aa15.22■□□□□ 0.03
SNX6-203ENST00000555416 STAG3L1P0CL83 205 aa15.22■□□□□ 0.03
SNX6-203ENST00000555416 GLRA2P23416 452 aa15.22■□□□□ 0.03
SNX6-203ENST00000555416 RESTQ13127 1097 aa15.22■□□□□ 0.03
SNX6-203ENST00000555416 CAPSQ13938 189 aa15.22■□□□□ 0.03
SNX6-203ENST00000555416 PDIA5Q14554 519 aa15.22■□□□□ 0.03
SNX6-203ENST00000555416 ECHDC2Q86YB7 292 aa15.22■□□□□ 0.03
SNX6-203ENST00000555416 SLC17A8Q8NDX2 589 aa15.22■□□□□ 0.03
SNX6-203ENST00000555416 ERMNQ8TAM6 284 aa15.22■□□□□ 0.03
SNX6-203ENST00000555416 TCP11Q8WWU5 503 aa15.22■□□□□ 0.03
SNX6-203ENST00000555416 CLP1Q92989 425 aaKnown RBP15.22■□□□□ 0.03
SNX6-203ENST00000555416 NACC1Q96RE7 527 aa15.22■□□□□ 0.03
SNX6-203ENST00000555416 POLR3FQ9H1D9 316 aaPredicted RBP15.22■□□□□ 0.03
SNX6-203ENST00000555416 LRFN2Q9ULH4 789 aa15.22■□□□□ 0.03
SNX6-203ENST00000555416 KIAA1024Q9UPX6 916 aa15.22■□□□□ 0.03
SNX6-203ENST00000555416 PCDHB7Q9Y5E2 793 aa15.22■□□□□ 0.03
SNX6-203ENST00000555416 KIAA1671Q9BY89 1806 aa15.22■□□□□ 0.03
SNX6-203ENST00000555416 FNDC1Q4ZHG4 1894 aaPredicted RBP15.21■□□□□ 0.03
SNX6-203ENST00000555416 LAD1O00515 517 aa15.21■□□□□ 0.03
SNX6-203ENST00000555416 GAS2O43903 313 aaKnown RBP15.21■□□□□ 0.03
SNX6-203ENST00000555416 HOXA11P31270 313 aaPredicted RBP15.21■□□□□ 0.03
SNX6-203ENST00000555416 CTNNB1P35222 781 aa15.21■□□□□ 0.03
SNX6-203ENST00000555416 BMPR1AP36894 532 aa15.21■□□□□ 0.03
SNX6-203ENST00000555416 CDC42EP1Q00587 391 aa15.21■□□□□ 0.03
SNX6-203ENST00000555416 GRIN1Q05586 938 aa15.21■□□□□ 0.03
SNX6-203ENST00000555416 DTHD1Q6ZMT9 781 aa15.21■□□□□ 0.03
SNX6-203ENST00000555416 CATSPER4Q7RTX7 472 aa15.21■□□□□ 0.03
SNX6-203ENST00000555416 ZNF598Q86UK7 904 aaKnown RBP15.21■□□□□ 0.03
SNX6-203ENST00000555416 EXOC8Q8IYI6 725 aa15.21■□□□□ 0.03
SNX6-203ENST00000555416 CMTR2Q8IYT2 770 aaKnown RBP15.21■□□□□ 0.03
SNX6-203ENST00000555416 SNX29Q8TEQ0 813 aa15.21■□□□□ 0.03
SNX6-203ENST00000555416 BSNDQ8WZ55 320 aa15.21■□□□□ 0.03
SNX6-203ENST00000555416 DDX19AQ9NUU7 478 aaKnown RBP15.21■□□□□ 0.03
SNX6-203ENST00000555416 TMEM161AQ9NX61 479 aa15.21■□□□□ 0.03
SNX6-203ENST00000555416 MTMR6Q9Y217 621 aa15.21■□□□□ 0.03
SNX6-203ENST00000555416 A0A0U1RQF3 1178 aa15.2■□□□□ 0.02
SNX6-203ENST00000555416 ARHGEF35A5YM69 484 aa15.2■□□□□ 0.02
SNX6-203ENST00000555416 VWA3AA6NCI4 1184 aa15.2■□□□□ 0.02
SNX6-203ENST00000555416 TBKBP1A7MCY6 615 aa15.2■□□□□ 0.02
SNX6-203ENST00000555416 MEIS3P2A8K0S8 358 aa15.2■□□□□ 0.02
SNX6-203ENST00000555416 E9PMD0 336 aa15.2■□□□□ 0.02
SNX6-203ENST00000555416 H3BNC9 293 aa15.2■□□□□ 0.02
SNX6-203ENST00000555416 ZSCAN20P17040 1043 aaPredicted RBP15.2■□□□□ 0.02
SNX6-203ENST00000555416 SFPQP23246 707 aaKnown RBP eCLIP15.2■□□□□ 0.02
SNX6-203ENST00000555416 PTENP60484 403 aa15.2■□□□□ 0.02
SNX6-203ENST00000555416 LONRF3Q496Y0 759 aa15.2■□□□□ 0.02
SNX6-203ENST00000555416 CLLU1OSQ5K130 101 aa15.2■□□□□ 0.02
SNX6-203ENST00000555416 PADI6Q6TGC4 694 aa15.2■□□□□ 0.02
SNX6-203ENST00000555416 LRRC55Q6ZSA7 311 aa15.2■□□□□ 0.02
SNX6-203ENST00000555416 BRAPQ7Z569 592 aa15.2■□□□□ 0.02
SNX6-203ENST00000555416 RNF169Q8NCN4 708 aa15.2■□□□□ 0.02
SNX6-203ENST00000555416 PNMA5Q96PV4 448 aa15.2■□□□□ 0.02
SNX6-203ENST00000555416 BHMT2Q9H2M3 363 aa15.2■□□□□ 0.02
SNX6-203ENST00000555416 PIN4Q9Y237 131 aaKnown RBP15.2■□□□□ 0.02
SNX6-203ENST00000555416 CLIC4Q9Y696 253 aa15.2■□□□□ 0.02
SNX6-203ENST00000555416 RALGAPA2Q2PPJ7 1873 aa15.2■□□□□ 0.02
SNX6-203ENST00000555416 MYO7AQ13402 2215 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 C5orf67F2Z3F1 127 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 GRM6O15303 877 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 ASAP2O43150 1006 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 CYP11B2P19099 503 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 PDCP20941 246 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 MUTP22033 750 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 MBTD1Q05BQ5 628 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 GPM6BQ13491 265 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 MXD4Q14582 209 aaPredicted RBP15.19■□□□□ 0.02
SNX6-203ENST00000555416 SF3A1Q15459 793 aaKnown RBP15.19■□□□□ 0.02
SNX6-203ENST00000555416 AMHR2Q16671 573 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 UBXN11Q5T124 520 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 HAUS3Q68CZ6 603 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 SRGAP1Q7Z6B7 1085 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 IFNLR1Q8IU57 520 aaPredicted RBP15.19■□□□□ 0.02
SNX6-203ENST00000555416 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.19■□□□□ 0.02
SNX6-203ENST00000555416 LRRC15Q8TF66 581 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 LPPQ93052 612 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 CCDC43Q96MW1 224 aaKnown RBP15.19■□□□□ 0.02
SNX6-203ENST00000555416 SAMD11Q96NU1 681 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 CASD1Q96PB1 797 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 PLIN2Q99541 437 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms