RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 SIP14410 1827 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 KDM3AQ9Y4C1 1321 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 A0A1B0GVL5 298 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 SMIM35A0A1B0GVV1 85 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 CUTAO60888 179 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 ZNF202O95125 648 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 CHRNA1P02708 482 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 GHRP10912 638 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 PLCG1P19174 1290 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 TXLNAP40222 546 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 RARRES1P49788 294 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 DNM2P50570 870 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 EPHB4P54760 987 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 MRPS6P82932 125 aaKnown RBP10.93□□□□□ -0.66
PSEN1-213ENST00000555386 RAD51AP2Q09MP3 1159 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 C11orf57Q6ZUT1 292 aaPredicted RBP10.93□□□□□ -0.66
PSEN1-213ENST00000555386 RHPN2Q8IUC4 686 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 KSR1Q8IVT5 923 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 NLRP7Q8WX94 980 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 NLRP4Q96MN2 994 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 OSBPL7Q9BZF2 842 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 UBE2OQ9C0C9 1292 aaKnown RBP10.93□□□□□ -0.66
PSEN1-213ENST00000555386 CDHR5Q9HBB8 845 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 GPRC5CQ9NQ84 441 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 ANKEF1Q9NU02 776 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 HPSEQ9Y251 543 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 R3HCC1Q9Y3T6 440 aaKnown RBP10.93□□□□□ -0.66
PSEN1-213ENST00000555386 PITPNM1O00562 1244 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 MAFO75444 373 aaPredicted RBP10.92□□□□□ -0.66
PSEN1-213ENST00000555386 LYPLA2O95372 231 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 SRGAP2CP0DJJ0 459 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 PFKFB1P16118 471 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 RFC5P40937 340 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 NLRP11P59045 1033 aaKnown RBP10.92□□□□□ -0.66
PSEN1-213ENST00000555386 NLRP12P59046 1061 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 MBTPS1Q14703 1052 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 FAM102BQ5T8I3 360 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 IER5Q5VY09 327 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 RRAGBQ5VZM2 374 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 PADI6Q6TGC4 694 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 OTOP2Q7RTS6 562 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 DHX40Q8IX18 779 aaKnown RBP10.92□□□□□ -0.66
PSEN1-213ENST00000555386 DRC7Q8IY82 874 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 ZNF830Q96NB3 372 aaPredicted RBP10.92□□□□□ -0.66
PSEN1-213ENST00000555386 CEP89Q96ST8 783 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 OSMRQ99650 979 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 MTRQ99707 1265 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 NT5C3AQ9H0P0 336 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 KCNF1Q9H3M0 494 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 ATP6V0A4Q9HBG4 840 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 TRPV2Q9Y5S1 764 aa10.92□□□□□ -0.66
PSEN1-213ENST00000555386 NPHP3-ACAD11A0A0J9YXS1 232 aa10.91□□□□□ -0.66
PSEN1-213ENST00000555386 ZBBXA8MT70 800 aa10.91□□□□□ -0.66
PSEN1-213ENST00000555386 SMTNL1A8MU46 457 aa10.91□□□□□ -0.66
PSEN1-213ENST00000555386 NBNO60934 754 aa10.91□□□□□ -0.66
PSEN1-213ENST00000555386 CSDE1O75534 798 aaKnown RBP10.91□□□□□ -0.66
PSEN1-213ENST00000555386 EYA4O95677 639 aa10.91□□□□□ -0.66
PSEN1-213ENST00000555386 PLA2G4BP0C869 781 aa10.91□□□□□ -0.66
PSEN1-213ENST00000555386 FGFR4P22455 802 aa10.91□□□□□ -0.66
PSEN1-213ENST00000555386 STAT6P42226 847 aa10.91□□□□□ -0.66
PSEN1-213ENST00000555386 SYKP43405 635 aa10.91□□□□□ -0.66
PSEN1-213ENST00000555386 TPM4P67936 248 aa10.91□□□□□ -0.66
PSEN1-213ENST00000555386 PPIGQ13427 754 aaKnown RBP eCLIP10.91□□□□□ -0.66
PSEN1-213ENST00000555386 MCM6Q14566 821 aa10.91□□□□□ -0.66
PSEN1-213ENST00000555386 TMEM119Q4V9L6 283 aa10.91□□□□□ -0.66
PSEN1-213ENST00000555386 RESP18Q5W5W9 173 aa10.91□□□□□ -0.66
PSEN1-213ENST00000555386 SHC4Q6S5L8 630 aa10.91□□□□□ -0.66
PSEN1-213ENST00000555386 SPC24Q8NBT2 197 aa10.91□□□□□ -0.66
PSEN1-213ENST00000555386 PRPF31Q8WWY3 499 aaKnown RBP10.91□□□□□ -0.66
PSEN1-213ENST00000555386 JPH2Q9BR39 696 aaPredicted RBP10.91□□□□□ -0.66
PSEN1-213ENST00000555386 CELF4Q9BZC1 486 aaKnown RBP10.91□□□□□ -0.66
PSEN1-213ENST00000555386 POLR3FQ9H1D9 316 aaPredicted RBP10.91□□□□□ -0.66
PSEN1-213ENST00000555386 DHX33Q9H6R0 707 aaKnown RBP10.91□□□□□ -0.66
PSEN1-213ENST00000555386 DBR1Q9UK59 544 aaKnown RBP10.91□□□□□ -0.66
PSEN1-213ENST00000555386 A0A087WZ62 844 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 A0A087X0B3 334 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 DYNC1I1O14576 645 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 DGAT1O75907 488 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 KRT18P05783 430 aaKnown RBP10.9□□□□□ -0.66
PSEN1-213ENST00000555386 PYGBP11216 843 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 MGAT3Q09327 533 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 NFX1Q12986 1120 aaKnown RBP10.9□□□□□ -0.66
PSEN1-213ENST00000555386 C9orf50Q5SZB4 431 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 TRAF7Q6Q0C0 670 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 ZNF365Q70YC5 407 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 CCDC186Q7Z3E2 898 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 RPUSD2Q8IZ73 545 aaKnown RBP10.9□□□□□ -0.66
PSEN1-213ENST00000555386 LRRC15Q8TF66 581 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 PSPC1Q8WXF1 523 aaKnown RBP10.9□□□□□ -0.66
PSEN1-213ENST00000555386 STAMQ92783 540 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 DHX58Q96C10 678 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.9□□□□□ -0.665e-7■■■□□ 18.9
PSEN1-213ENST00000555386 FDXACB1Q9BRP7 624 aaPredicted RBP10.9□□□□□ -0.66
PSEN1-213ENST00000555386 RUSC1Q9BVN2 902 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 CCSER1Q9C0I3 900 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 ZHX3Q9H4I2 956 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 IL23AQ9NPF7 189 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 XPNPEP1Q9NQW7 623 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 FAM13BQ9NYF5 915 aa10.9□□□□□ -0.66
PSEN1-213ENST00000555386 HOOK1Q9UJC3 728 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms