RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 HPS3Q969F9 1004 aa4.46□□□□□ -1.7
KTN1-220ENST00000555172 ATP6V1E2Q96A05 226 aa4.46□□□□□ -1.7
KTN1-220ENST00000555172 CCDC47Q96A33 483 aaKnown RBP4.46□□□□□ -1.7
KTN1-220ENST00000555172 DIRC2Q96SL1 478 aa4.46□□□□□ -1.7
KTN1-220ENST00000555172 NKX2-4Q9H2Z4 354 aa4.46□□□□□ -1.7
KTN1-220ENST00000555172 PLEKHA5Q9HAU0 1116 aa4.46□□□□□ -1.7
KTN1-220ENST00000555172 CHST7Q9NS84 486 aa4.46□□□□□ -1.7
KTN1-220ENST00000555172 SNX5Q9Y5X3 404 aa4.46□□□□□ -1.7
KTN1-220ENST00000555172 TMEM265A0A087WTH1 108 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 FSD2A1L4K1 749 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 FAM227AF5H4B4 570 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 RBAK-RBAKDNI3L0D1 243 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 CBX7O95931 251 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 MTHFD1P11586 935 aaKnown RBP4.45□□□□□ -1.7
KTN1-220ENST00000555172 GPR3P46089 330 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 TUBP50607 506 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 MAPK10P53779 464 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 GFRA1P56159 465 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 SNX16P57768 344 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 KRT85P78386 507 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 POU4F1Q01851 419 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 IKZF1Q13422 519 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 SNW1Q13573 536 aaKnown RBP4.45□□□□□ -1.7
KTN1-220ENST00000555172 CLEC16AQ2KHT3 1053 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 SLC10A5Q5PT55 438 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 FKBP15Q5T1M5 1219 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 ZNF449Q6P9G9 518 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 KCNT2Q6UVM3 1135 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 LIX1LQ8IVB5 337 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 TMEM145Q8NBT3 493 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 TMEM169Q96HH4 297 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 RSRC1Q96IZ7 334 aaKnown RBP4.45□□□□□ -1.7
KTN1-220ENST00000555172 HEXIM2Q96MH2 286 aaKnown RBP4.45□□□□□ -1.7
KTN1-220ENST00000555172 SLC2A13Q96QE2 648 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 RMDN3Q96TC7 470 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 ORAI3Q9BRQ5 295 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 TTLL2Q9BWV7 592 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 CYP26B1Q9NR63 512 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 CCM2LQ9NUG4 571 aaPredicted RBP4.45□□□□□ -1.7
KTN1-220ENST00000555172 ITGB1BP2Q9UKP3 347 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 TMCC3Q9ULS5 477 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.45□□□□□ -1.7
KTN1-220ENST00000555172 C19orf81C9J6K1 198 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 DDX3XO00571 662 aaKnown RBP eCLIP4.45□□□□□ -1.7
KTN1-220ENST00000555172 ULK1O75385 1050 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 HRGP04196 525 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 HSP90AB1P08238 724 aaKnown RBP4.45□□□□□ -1.7
KTN1-220ENST00000555172 CKMT1AP12532 417 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 PDIA3P30101 505 aaKnown RBP4.45□□□□□ -1.7
KTN1-220ENST00000555172 ECI1P42126 302 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 LIFRP42702 1097 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 CTSWP56202 376 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 GALNT1Q10472 559 aaPredicted RBP4.45□□□□□ -1.7
KTN1-220ENST00000555172 NMIQ13287 307 aaPredicted RBP4.45□□□□□ -1.7
KTN1-220ENST00000555172 PLCB4Q15147 1175 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 CCNG2Q16589 344 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 TTLL5Q6EMB2 1281 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 TMCO3Q6UWJ1 677 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 TMC3Q7Z5M5 1100 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 ARL10Q8N8L6 244 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 DTWD2Q8NBA8 298 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 UNKQ9C0B0 810 aaKnown RBP4.45□□□□□ -1.7
KTN1-220ENST00000555172 TRIT1Q9H3H1 467 aaKnown RBP4.45□□□□□ -1.7
KTN1-220ENST00000555172 NFKBIL1Q9UBC1 381 aaPredicted RBP4.45□□□□□ -1.7
KTN1-220ENST00000555172 GPR55Q9Y2T6 319 aaPredicted RBP4.45□□□□□ -1.7
KTN1-220ENST00000555172 ITIH6Q6UXX5 1313 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 CLSPNQ9HAW4 1339 aa4.45□□□□□ -1.7
KTN1-220ENST00000555172 PITPNM2Q9BZ72 1349 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 B4E171 279 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 MEIS1O00470 390 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 VAMP4O75379 141 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 TUSC2O75896 110 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 PRAMEF1O95521 474 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 DNTTP04053 509 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 SCG5P05408 212 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 GSNP06396 782 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 DHRS4L1P0CG22 281 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 OSMP13725 252 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 C5AR1P21730 350 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 NOP2P46087 812 aaKnown RBP4.44□□□□□ -1.7
KTN1-220ENST00000555172 KPNA1P52294 538 aaPredicted RBP4.44□□□□□ -1.7
KTN1-220ENST00000555172 GUCY1A3Q02108 690 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 BTKQ06187 659 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 BLMHQ13867 455 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 POSTNQ15063 836 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 DPY19L1Q2PZI1 675 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 FAM209BQ5JX69 171 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 CREB3L3Q68CJ9 461 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 FAM47EQ6ZV65 393 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 USP53Q70EK8 1073 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 MAMDC2Q7Z304 686 aaPredicted RBP4.44□□□□□ -1.7
KTN1-220ENST00000555172 DDX53Q86TM3 631 aaKnown RBP4.44□□□□□ -1.7
KTN1-220ENST00000555172 C11orf74Q86VG3 221 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 TBC1D31Q96DN5 1066 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 MAP3K14Q99558 947 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 LRFN3Q9BTN0 628 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 XPO4Q9C0E2 1151 aaKnown RBP4.44□□□□□ -1.7
KTN1-220ENST00000555172 CHMP4BQ9H444 224 aaKnown RBP4.44□□□□□ -1.7
KTN1-220ENST00000555172 ATP6V0A4Q9HBG4 840 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 ARHGAP28Q9P2N2 729 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms