RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ZNF711Q9Y462 761 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 ADCY3O60266 1144 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 CASP14P31944 242 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 CHSY1Q86X52 802 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 PPP2R3CQ969Q6 453 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 CDHR1Q96JP9 859 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 LGR6Q9HBX8 967 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 EPN1Q9Y6I3 576 aaPredicted RBP7.32□□□□□ -1.24
SYNE2-216ENST00000555002 ZNF804BA4D1E1 1349 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 ADGRA2Q96PE1 1338 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 CAPN1P07384 714 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 CDC37Q16543 378 aaPredicted RBP7.31□□□□□ -1.24
SYNE2-216ENST00000555002 RC3H1Q5TC82 1133 aaKnown RBP7.31□□□□□ -1.24
SYNE2-216ENST00000555002 GALNT17Q6IS24 598 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 GPR101Q96P66 508 aaPredicted RBP7.31□□□□□ -1.24
SYNE2-216ENST00000555002 USP28Q96RU2 1077 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 TUBB6Q9BUF5 446 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 CLIC4Q9Y696 253 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 ABCC12Q96J65 1359 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 MYBP10242 640 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 RALAP11233 206 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 GNAT1P11488 350 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 SURF1Q15526 300 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 ZNF568Q3ZCX4 644 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 IFNL3Q8IZI9 196 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 PPIEQ9UNP9 301 aaKnown RBP7.31□□□□□ -1.24
SYNE2-216ENST00000555002 KCNH4Q9UQ05 1017 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 PRXQ9BXM0 1461 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 PRRG1O14668 218 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 LZTS3O60299 673 aaPredicted RBP7.31□□□□□ -1.24
SYNE2-216ENST00000555002 UPP2O95045 317 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 GRIK1P39086 918 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 PSMC5P62195 406 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 ZNF394Q53GI3 561 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 COBLL1Q53SF7 1204 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 BEST2Q8NFU1 509 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 JADE3Q92613 823 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 HES6Q96HZ4 224 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 KDM4CQ9H3R0 1056 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 TJP2Q9UDY2 1190 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 PCSK1NQ9UHG2 260 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 RAD51Q06609 339 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 NNTQ13423 1086 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 KRT78Q8N1N4 520 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 HEMGNQ9BXL5 484 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 C14orf93Q9H972 538 aaKnown RBP7.31□□□□□ -1.24
SYNE2-216ENST00000555002 E2F8A0AVK6 867 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 CYTH3O43739 400 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 RPS6P62753 249 aaKnown RBP7.31□□□□□ -1.24
SYNE2-216ENST00000555002 CHRNDQ07001 517 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 TRIP4Q15650 581 aaPredicted RBP7.31□□□□□ -1.24
SYNE2-216ENST00000555002 UBE2SQ16763 222 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 FAM162AQ96A26 154 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 PIGSQ96S52 555 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 MMP19Q99542 508 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 SLC13A1Q9BZW2 595 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 V9GYQ6 96 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 GYG2O15488 501 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 ALDH6A1Q02252 535 aaKnown RBP7.31□□□□□ -1.24
SYNE2-216ENST00000555002 ACAP3Q96P50 834 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 TSSK1BQ9BXA7 367 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 DCTN4Q9UJW0 460 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 MED21Q13503 144 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 SLC35F6Q8N357 371 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 NUP85Q9BW27 656 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 USP19O94966 1318 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 ABCB11O95342 1321 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 PHKG1Q16816 387 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 BZW1Q7L1Q6 419 aaKnown RBP7.31□□□□□ -1.24
SYNE2-216ENST00000555002 PARVGQ9HBI0 331 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 STMN3Q9NZ72 180 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 KIAA1468Q9P260 1216 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 DTNAQ9Y4J8 743 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 CNTRLQ7Z7A1 2325 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 SYCP2Q9BX26 1530 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 HUS1O60921 280 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 HMBSP08397 361 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 GPC3P51654 580 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 MDH1BQ5I0G3 518 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 ATP11CQ8NB49 1132 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 ZNF555Q8NEP9 628 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 FAM81BQ96LP2 452 aa7.31□□□□□ -1.24
SYNE2-216ENST00000555002 TSEN34Q9BSV6 310 aaKnown RBP7.31□□□□□ -1.24
SYNE2-216ENST00000555002 SERPINB10P48595 397 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 ALS2CLQ60I27 953 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 TSC22D3Q99576 134 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 APOL5Q9BWW9 433 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 WDR11Q9BZH6 1224 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 NOVA2Q9UNW9 492 aaKnown RBP7.3□□□□□ -1.24
SYNE2-216ENST00000555002 ZFYVE9O95405 1425 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 AGRPO00253 132 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 P4HA2O15460 535 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 TJP3O95049 919 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 GRK2P25098 689 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 HMOX2P30519 316 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 FEN1P39748 380 aaKnown RBP7.3□□□□□ -1.24
SYNE2-216ENST00000555002 GPR1P46091 355 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 PPM1NQ8N819 430 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 EXD1Q8NHP7 514 aa7.3□□□□□ -1.24
SYNE2-216ENST00000555002 MUC3BQ9H195 1237 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms