RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 C4orf19Q8IY42 314 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 RTKN2Q8IZC4 609 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 ZNF622Q969S3 477 aaKnown RBP eCLIP13.72□□□□□ -0.212e-7■■■□□ 14.6
PPP4R3A-206ENST00000554943 ARL8AQ96BM9 186 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 TAF1DQ9H5J8 278 aaPredicted RBP13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 PACSIN2Q9UNF0 486 aaPredicted RBP13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 IPO5O00410 1097 aaKnown RBP13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 HIP1RO75146 1068 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 CPP00450 1065 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 IVLP07476 585 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 STAT1P42224 750 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 PEX5P50542 639 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 IRAK1P51617 712 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 GALCP54803 685 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 CYP1B1Q16678 543 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 TKFCQ3LXA3 575 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 SMYD5Q6GMV2 418 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 C15orf39Q6ZRI6 1047 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 ZNF112Q9UJU3 913 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 TULP1O00294 542 aaPredicted RBP13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 PPFIA4O75335 1185 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 LMNB1P20700 586 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 DRG2P55039 364 aaKnown RBP13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 PPFIA1Q13136 1202 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 PALB2Q86YC2 1186 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 RFFLQ8WZ73 363 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 DDX1Q92499 740 aaKnown RBP13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 UIMC1Q96RL1 719 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 ZNF577Q9BSK1 485 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 KCNH7Q9NS40 1196 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 ZHX2Q9Y6X8 837 aa13.72□□□□□ -0.21
PPP4R3A-206ENST00000554943 PLS3P13797 630 aa13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 ADSSP30520 456 aa13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 DLG4P78352 724 aa13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 SIX1Q15475 284 aaPredicted RBP13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 TDRD12Q587J7 1177 aaKnown RBP13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 FAM71AQ8IYT1 594 aa13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 SPICE1Q8N0Z3 855 aa13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 TEKT3Q9BXF9 490 aa13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 CLIC2O15247 247 aa13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 TP73O15350 636 aa13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 HEXIM1O94992 359 aaKnown RBP13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 CTNNA2P26232 953 aa13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 PAFAH1B1P43034 410 aa13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 PPP3CAQ08209 521 aa13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 DRAP1Q14919 205 aaPredicted RBP13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 IFI16Q16666 785 aaKnown RBP13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 SND1Q7KZF4 910 aaKnown RBP eCLIP13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 CAGE1Q8TC20 777 aa13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 LPAR1Q92633 364 aa13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 HVCN1Q96D96 273 aa13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.71□□□□□ -0.21
PPP4R3A-206ENST00000554943 WDR46O15213 610 aaKnown RBP13.71□□□□□ -0.22
PPP4R3A-206ENST00000554943 EIF3HO15372 352 aaKnown RBP eCLIP13.71□□□□□ -0.22
PPP4R3A-206ENST00000554943 TBCAO75347 108 aaKnown RBP13.71□□□□□ -0.22
PPP4R3A-206ENST00000554943 SSBP05455 408 aaKnown RBP eCLIP13.71□□□□□ -0.22
PPP4R3A-206ENST00000554943 P4HBP07237 508 aaKnown RBP13.71□□□□□ -0.22
PPP4R3A-206ENST00000554943 PAEPP09466 180 aa13.71□□□□□ -0.22
PPP4R3A-206ENST00000554943 LMAN1P49257 510 aa13.71□□□□□ -0.22
PPP4R3A-206ENST00000554943 PTENP60484 403 aa13.71□□□□□ -0.22
PPP4R3A-206ENST00000554943 IRX5P78411 483 aaPredicted RBP13.71□□□□□ -0.22
PPP4R3A-206ENST00000554943 RASA3Q14644 834 aa13.71□□□□□ -0.22
PPP4R3A-206ENST00000554943 ZNF772Q68DY9 489 aaPredicted RBP13.71□□□□□ -0.22
PPP4R3A-206ENST00000554943 KSR1Q8IVT5 923 aa13.71□□□□□ -0.22
PPP4R3A-206ENST00000554943 ZDHHC14Q8IZN3 488 aa13.71□□□□□ -0.22
PPP4R3A-206ENST00000554943 CEP89Q96ST8 783 aa13.71□□□□□ -0.22
PPP4R3A-206ENST00000554943 CARD9Q9H257 536 aa13.71□□□□□ -0.22
PPP4R3A-206ENST00000554943 TMBIM4Q9HC24 238 aa13.71□□□□□ -0.22
PPP4R3A-206ENST00000554943 DNAJC12Q9UKB3 198 aa13.71□□□□□ -0.22
PPP4R3A-206ENST00000554943 PPP1R9AQ9ULJ8 1098 aa13.71□□□□□ -0.22
PPP4R3A-206ENST00000554943 NOC2LQ9Y3T9 749 aaKnown RBP13.71□□□□□ -0.22
PPP4R3A-206ENST00000554943 FAM170AA1A519 330 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 SFI1A8K8P3 1242 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 PTGIRP43119 386 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 PAK2Q13177 524 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 MSL1Q68DK7 614 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 SYTL5Q8TDW5 730 aaPredicted RBP13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 ARHGEF26Q96DR7 871 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 DRC1Q96MC2 740 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 MFSD14AQ96MC6 490 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 TAS2R14Q9NYV8 317 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 GAS7O60861 476 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 PPFIA2O75334 1257 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 RTP1P59025 263 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 RPS6KA1Q15418 735 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 DUPD1Q68J44 220 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 SLC39A4Q6P5W5 647 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 SYCE1Q8N0S2 351 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 SLC35G2Q8TBE7 412 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 TMEM39BQ9GZU3 492 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 EHMT1Q9H9B1 1298 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 FEZ2Q9UHY8 353 aaPredicted RBP13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 PCDHB13Q9Y5F0 798 aa13.7□□□□□ -0.22
PPP4R3A-206ENST00000554943 ANKRD62A6NC57 917 aa13.69□□□□□ -0.22
PPP4R3A-206ENST00000554943 A6NNZ2 444 aa13.69□□□□□ -0.22
PPP4R3A-206ENST00000554943 ATP2A1O14983 1001 aa13.69□□□□□ -0.22
PPP4R3A-206ENST00000554943 PGM5Q15124 567 aa13.69□□□□□ -0.22
PPP4R3A-206ENST00000554943 UGCGQ16739 394 aa13.69□□□□□ -0.22
PPP4R3A-206ENST00000554943 TUBB8Q3ZCM7 444 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms