RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 EPOPA6NHQ4 379 aa13.74□□□□□ -0.21
SYNE2-214ENST00000554928 TLL1O43897 1013 aa13.74□□□□□ -0.21
SYNE2-214ENST00000554928 EFCAB14O75071 495 aa13.74□□□□□ -0.21
SYNE2-214ENST00000554928 DGAT1O75907 488 aa13.74□□□□□ -0.21
SYNE2-214ENST00000554928 BRD1O95696 1058 aa13.74□□□□□ -0.21
SYNE2-214ENST00000554928 AMHP03971 560 aa13.74□□□□□ -0.21
SYNE2-214ENST00000554928 NASPP49321 788 aaPredicted RBP13.74□□□□□ -0.21
SYNE2-214ENST00000554928 GRIN2CQ14957 1233 aa13.74□□□□□ -0.21
SYNE2-214ENST00000554928 KARSQ15046 597 aaKnown RBP13.74□□□□□ -0.21
SYNE2-214ENST00000554928 RAB30Q15771 203 aa13.74□□□□□ -0.21
SYNE2-214ENST00000554928 CRIPAKQ8N1N5 446 aa13.74□□□□□ -0.21
SYNE2-214ENST00000554928 RNF149Q8NC42 400 aa13.74□□□□□ -0.21
SYNE2-214ENST00000554928 CCDC43Q96MW1 224 aaKnown RBP13.74□□□□□ -0.21
SYNE2-214ENST00000554928 ADAM2Q99965 735 aa13.74□□□□□ -0.21
SYNE2-214ENST00000554928 JPH2Q9BR39 696 aaPredicted RBP13.74□□□□□ -0.21
SYNE2-214ENST00000554928 RAB34Q9BZG1 259 aa13.74□□□□□ -0.21
SYNE2-214ENST00000554928 TSPYL2Q9H2G4 693 aaPredicted RBP13.74□□□□□ -0.21
SYNE2-214ENST00000554928 ZNF576Q9H609 170 aa13.74□□□□□ -0.21
SYNE2-214ENST00000554928 CERS4Q9HA82 394 aa13.74□□□□□ -0.21
SYNE2-214ENST00000554928 MTMR10Q9NXD2 777 aa13.74□□□□□ -0.21
SYNE2-214ENST00000554928 CHD7Q9P2D1 2997 aa13.74□□□□□ -0.21
SYNE2-214ENST00000554928 MSRAQ9UJ68 235 aa13.74□□□□□ -0.21
SYNE2-214ENST00000554928 COL4A6Q14031 1691 aa13.74□□□□□ -0.21
SYNE2-214ENST00000554928 GPR182O15218 404 aa13.73□□□□□ -0.21
SYNE2-214ENST00000554928 EYA4O95677 639 aa13.73□□□□□ -0.21
SYNE2-214ENST00000554928 BMP15O95972 392 aa13.73□□□□□ -0.21
SYNE2-214ENST00000554928 CYP11B2P19099 503 aa13.73□□□□□ -0.21
SYNE2-214ENST00000554928 MUTP22033 750 aa13.73□□□□□ -0.21
SYNE2-214ENST00000554928 HTRA4P83105 476 aaPredicted RBP13.73□□□□□ -0.21
SYNE2-214ENST00000554928 TAP1Q03518 808 aa13.73□□□□□ -0.21
SYNE2-214ENST00000554928 SLC39A14Q15043 492 aa13.73□□□□□ -0.21
SYNE2-214ENST00000554928 FAM102BQ5T8I3 360 aa13.73□□□□□ -0.21
SYNE2-214ENST00000554928 ZNF697Q5TEC3 545 aa13.73□□□□□ -0.21
SYNE2-214ENST00000554928 GPR153Q6NV75 609 aa13.73□□□□□ -0.21
SYNE2-214ENST00000554928 ZNF410Q86VK4 478 aa13.73□□□□□ -0.21
SYNE2-214ENST00000554928 DAW1Q8N136 415 aa13.73□□□□□ -0.21
SYNE2-214ENST00000554928 LINC00301Q8NCQ3 95 aa13.73□□□□□ -0.21
SYNE2-214ENST00000554928 TCP11Q8WWU5 503 aa13.73□□□□□ -0.21
SYNE2-214ENST00000554928 ZBED2Q9BTP6 218 aa13.73□□□□□ -0.21
SYNE2-214ENST00000554928 GCOM2Q9BZD3 368 aaPredicted RBP13.73□□□□□ -0.21
SYNE2-214ENST00000554928 RC3H2Q9HBD1 1191 aaKnown RBP13.73□□□□□ -0.21
SYNE2-214ENST00000554928 BLOC1S4Q9NUP1 217 aa13.73□□□□□ -0.21
SYNE2-214ENST00000554928 SRPRBQ9Y5M8 271 aaKnown RBP13.73□□□□□ -0.21
SYNE2-214ENST00000554928 A0A087X0B3 334 aa13.72□□□□□ -0.21
SYNE2-214ENST00000554928 NPHP3-ACAD11A0A0J9YXS1 232 aa13.72□□□□□ -0.21
SYNE2-214ENST00000554928 C9IYK1 514 aa13.72□□□□□ -0.21
SYNE2-214ENST00000554928 RFXAPO00287 272 aa13.72□□□□□ -0.21
SYNE2-214ENST00000554928 GAS2O43903 313 aaKnown RBP13.72□□□□□ -0.21
SYNE2-214ENST00000554928 PLCG1P19174 1290 aa13.72□□□□□ -0.21
SYNE2-214ENST00000554928 LONP1P36776 959 aaKnown RBP13.72□□□□□ -0.21
SYNE2-214ENST00000554928 DNM1Q05193 864 aaKnown RBP13.72□□□□□ -0.21
SYNE2-214ENST00000554928 MAPK7Q13164 816 aa13.72□□□□□ -0.21
SYNE2-214ENST00000554928 PPP2R2DQ66LE6 453 aa13.72□□□□□ -0.21
SYNE2-214ENST00000554928 SYMPKQ92797 1274 aaKnown RBP13.72□□□□□ -0.21
SYNE2-214ENST00000554928 RAD9AQ99638 391 aa13.72□□□□□ -0.21
SYNE2-214ENST00000554928 KIFC3Q9BVG8 833 aa13.72□□□□□ -0.21
SYNE2-214ENST00000554928 RGS18Q9NS28 235 aa13.72□□□□□ -0.21
SYNE2-214ENST00000554928 RNF19AQ9NV58 838 aa13.72□□□□□ -0.21
SYNE2-214ENST00000554928 DNM3Q9UQ16 869 aa13.72□□□□□ -0.21
SYNE2-214ENST00000554928 USP20Q9Y2K6 914 aa13.72□□□□□ -0.21
SYNE2-214ENST00000554928 ADGRA3Q8IWK6 1321 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 LINC01553A4QN01 128 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 TTLL13PA6NNM8 815 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 EDN1P05305 212 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 SSBP05455 408 aaKnown RBP eCLIP13.71□□□□□ -0.21
SYNE2-214ENST00000554928 UBA7P41226 1012 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 SLC12A3P55017 1021 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 PTENP60484 403 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 RAD51AP2Q09MP3 1159 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 STK38Q15208 465 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 AMHR2Q16671 573 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 RINT1Q6NUQ1 792 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 C1orf186Q6ZWK4 172 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 EXOC8Q8IYI6 725 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 MYLIPQ8WY64 445 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 AK8Q96MA6 479 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 CDX2Q99626 313 aaPredicted RBP13.71□□□□□ -0.21
SYNE2-214ENST00000554928 FTHL17Q9BXU8 183 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 PRDM12Q9H4Q4 367 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 SLC28A3Q9HAS3 691 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 HCSTQ9UBK5 93 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 STK24Q9Y6E0 443 aa13.71□□□□□ -0.21
SYNE2-214ENST00000554928 DENND3A2RUS2 1198 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 MEIS3P2A8K0S8 358 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 SFI1A8K8P3 1242 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 SPTLC2O15270 562 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 B4GALT5O43286 388 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 HIP1RO75146 1068 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 LINC00271P0C7V0 271 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 PLA2G4BP0C869 781 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 ATF7P17544 494 aaPredicted RBP13.7□□□□□ -0.22
SYNE2-214ENST00000554928 HOXA11P31270 313 aaPredicted RBP13.7□□□□□ -0.22
SYNE2-214ENST00000554928 DDIT3P35638 169 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 SARSP49591 514 aaKnown RBP13.7□□□□□ -0.22
SYNE2-214ENST00000554928 FAM189BP81408 668 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 MBTD1Q05BQ5 628 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 ADGRE1Q14246 886 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 BECN1Q14457 450 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 DHX8Q14562 1220 aaKnown RBP13.7□□□□□ -0.22
SYNE2-214ENST00000554928 MCM6Q14566 821 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms