RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 CDK8P49336 464 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 NHLH1Q02575 133 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 TTF1Q15361 905 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-229ENST00000554672 LEXMQ3ZCV2 418 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 FAM83BQ5T0W9 1011 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 SLC9C2Q5TAH2 1124 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 IQSEC1Q6DN90 963 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 ZNF574Q6ZN55 896 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-229ENST00000554672 HERC6Q8IVU3 1022 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 AMOTL1Q8IY63 956 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 CCDC144CPQ8IYA2 1237 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 SMYD4Q8IYR2 804 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-229ENST00000554672 TRMT2AQ8IZ69 625 aaKnown RBP5.77□□□□□ -1.49
ATXN3-229ENST00000554672 CPXCR1Q8N123 301 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 C3orf58Q8NDZ4 430 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 CHST13Q8NET6 341 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 FLCNQ8NFG4 579 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 SSH3Q8TE77 659 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 EAF2Q96CJ1 260 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-229ENST00000554672 SCLYQ96I15 445 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 KATNBL1Q9H079 304 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 ALDH8A1Q9H2A2 487 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-229ENST00000554672 ATXN3LQ9H3M9 355 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 ATP8A2Q9NTI2 1148 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 GPN3Q9UHW5 284 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-229ENST00000554672 NOP58Q9Y2X3 529 aaKnown RBP5.77□□□□□ -1.49
ATXN3-229ENST00000554672 DNAH12Q6ZR08 3092 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 NCOR1O75376 2440 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 PIEZO1Q92508 2521 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-229ENST00000554672 F5H6K3 240 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 LPXNO60711 386 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 PDE6AP16499 860 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 ARNTP27540 789 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 RARSP54136 660 aaKnown RBP5.76□□□□□ -1.49
ATXN3-229ENST00000554672 OAZ1P54368 228 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 PLCB3Q01970 1234 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 KLRC3Q07444 240 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 ZNF252P-AS1Q0IIN9 211 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 BNIP3Q12983 259 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 ENOX2Q16206 610 aaKnown RBP5.76□□□□□ -1.49
ATXN3-229ENST00000554672 CYP27C1Q4G0S4 372 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 ZC3H12AQ5D1E8 599 aaKnown RBP5.76□□□□□ -1.49
ATXN3-229ENST00000554672 C12orf60Q5U649 245 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 DEFB128Q7Z7B8 93 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 TLK2Q86UE8 772 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 SULF2Q8IWU5 870 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 PLD6Q8N2A8 252 aaKnown RBP5.76□□□□□ -1.49
ATXN3-229ENST00000554672 FAM181AQ8N9Y4 354 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 SDR42E1Q8WUS8 393 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 KCNB2Q92953 911 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 FGD4Q96M96 766 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 FTOQ9C0B1 505 aaKnown RBP eCLIP5.76□□□□□ -1.49
ATXN3-229ENST00000554672 UBE2ZQ9H832 354 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-229ENST00000554672 CACNA2D2Q9NY47 1150 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 DCTN4Q9UJW0 460 aa5.76□□□□□ -1.49
ATXN3-229ENST00000554672 ASTN1O14525 1302 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 ZNF532Q9HCE3 1301 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 PNMA6FA0A0J9YX94 578 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 DCXO43602 365 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 BCAR3O75815 825 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 BAIAP3O94812 1187 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 IQCF3P0C7M6 154 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 CYP2C9P11712 490 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 PSMC6P62333 389 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 PPP2R3AQ06190 1150 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 PDE4CQ08493 712 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 C16orf86Q6ZW13 317 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 LCORLQ8N3X6 602 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 FAM133AQ8N9E0 248 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-229ENST00000554672 NUP88Q99567 741 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-229ENST00000554672 PIDD1Q9HB75 910 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 SLC38A10Q9HBR0 1119 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 RAVER2Q9HCJ3 691 aaKnown RBP5.75□□□□□ -1.49
ATXN3-229ENST00000554672 TRMT13Q9NUP7 481 aaKnown RBP5.75□□□□□ -1.49
ATXN3-229ENST00000554672 PPP4R2Q9NY27 417 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 NYAP2Q9P242 653 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 FEM1BQ9UK73 627 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 SLC5A6Q9Y289 635 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 ZNF236Q9UL36 1845 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 MYH13Q9UKX3 1938 aa5.75□□□□□ -1.49
ATXN3-229ENST00000554672 TNKSO95271 1327 aa5.74□□□□□ -1.49
ATXN3-229ENST00000554672 TCRBV5S4A2TA0A5A2 114 aa5.74□□□□□ -1.49
ATXN3-229ENST00000554672 PRKAB2O43741 272 aa5.74□□□□□ -1.49
ATXN3-229ENST00000554672 KPNA6O60684 536 aa5.74□□□□□ -1.49
ATXN3-229ENST00000554672 RNGTTO60942 597 aaKnown RBP5.74□□□□□ -1.49
ATXN3-229ENST00000554672 NDUFB10O96000 172 aa5.74□□□□□ -1.49
ATXN3-229ENST00000554672 TRIM27P14373 513 aa5.74□□□□□ -1.49
ATXN3-229ENST00000554672 IL9P15248 144 aa5.74□□□□□ -1.49
ATXN3-229ENST00000554672 BMP6P22004 513 aa5.74□□□□□ -1.49
ATXN3-229ENST00000554672 NME2P22392 152 aa5.74□□□□□ -1.49
ATXN3-229ENST00000554672 KCNA5P22460 613 aa5.74□□□□□ -1.49
ATXN3-229ENST00000554672 KCNJ6P48051 423 aa5.74□□□□□ -1.49
ATXN3-229ENST00000554672 ERVK-21P61565 698 aa5.74□□□□□ -1.49
ATXN3-229ENST00000554672 CNTN2Q02246 1040 aa5.74□□□□□ -1.49
ATXN3-229ENST00000554672 PTPN11Q06124 597 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-229ENST00000554672 BFSP2Q13515 415 aa5.74□□□□□ -1.49
ATXN3-229ENST00000554672 TKFCQ3LXA3 575 aa5.74□□□□□ -1.49
ATXN3-229ENST00000554672 DUSP28Q4G0W2 176 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms