RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 SCNN1AP37088 669 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 EIF4A3P38919 411 aaKnown RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 MAGEA12P43365 314 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 SMTNP53814 917 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 GNG11P61952 73 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 MOGSQ13724 837 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 INF2Q27J81 1249 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 TKFCQ3LXA3 575 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 CGB2Q6NT52 195 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 MON1BQ7L1V2 547 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 FAM160B2Q86V87 743 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 SMYD4Q8IYR2 804 aaPredicted RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 ALDH16A1Q8IZ83 802 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 AGBL3Q8NEM8 1001 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 ZNF398Q8TD17 642 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 IPO4Q8TEX9 1081 aaKnown RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 EMID1Q96A84 441 aaPredicted RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 DYNLL2Q96FJ2 89 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 MASTLQ96GX5 879 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 ZIM3Q96PE6 472 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 CAMKK2Q96RR4 588 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 TSPAN18Q96SJ8 248 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 DESI2Q9BSY9 194 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 LRRC1Q9BTT6 524 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 ANO3Q9BYT9 981 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 TMEM134Q9H6X4 195 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 PRDM16Q9HAZ2 1276 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 KIAA1586Q9HCI6 787 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 RBM12Q9NTZ6 932 aaKnown RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 SRP68Q9UHB9 627 aaKnown RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 DMGDHQ9UI17 866 aaKnown RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 GGA1Q9UJY5 639 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 SCN10AQ9Y5Y9 1956 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 A0A087X0T9 212 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 SIGLEC16A6NMB1 481 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 MAFGO15525 162 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 DNAJC6O75061 913 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 RNF40O75150 1001 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 ERBB2P04626 1255 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 FAM163BP0C2L3 166 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 FAM228BP0C875 321 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 GARTP22102 1010 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 UBXN1Q04323 297 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 ENOSF1Q7L5Y1 443 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 PPFIBP1Q86W92 1011 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 RIBC1Q8N443 379 aaPredicted RBP3.76□□□□□ -1.81
SEC23A-207ENST00000554615 MIGA1Q8NAN2 632 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 FAM151AQ8WW52 585 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 RFFLQ8WZ73 363 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 KAT2BQ92831 832 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 RNF25Q96BH1 459 aaPredicted RBP3.76□□□□□ -1.81
SEC23A-207ENST00000554615 L3MBTL3Q96JM7 780 aaPredicted RBP3.76□□□□□ -1.81
SEC23A-207ENST00000554615 AGO4Q9HCK5 861 aaKnown RBP3.76□□□□□ -1.81
SEC23A-207ENST00000554615 PDE11AQ9HCR9 933 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 CNTN3Q9P232 1028 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 LRWD1Q9UFC0 647 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 LNPEPQ9UIQ6 1025 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 DRG1Q9Y295 367 aaKnown RBP3.76□□□□□ -1.81
SEC23A-207ENST00000554615 RTCBQ9Y3I0 505 aaKnown RBP3.76□□□□□ -1.81
SEC23A-207ENST00000554615 ANKRD62A6NC57 917 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 O00370 1275 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 KLF11O14901 512 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 ECE2O60344 883 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 ATP2C2O75185 946 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 EIF3JO75822 258 aaKnown RBP3.76□□□□□ -1.81
SEC23A-207ENST00000554615 AFPP02771 609 aaKnown RBP3.76□□□□□ -1.81
SEC23A-207ENST00000554615 ICAM1P05362 532 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 MYBL1P10243 752 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 ALOX15P16050 662 aaPredicted RBP3.76□□□□□ -1.81
SEC23A-207ENST00000554615 KLRC1P26715 233 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 RFC4P35249 363 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 GGCXP38435 758 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 CCNFP41002 786 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 SLC1A4P43007 532 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 CCT5P48643 541 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 NLRP5P59047 1200 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 CBX1P83916 185 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 EIF4EBP2Q13542 120 aaPredicted RBP3.76□□□□□ -1.81
SEC23A-207ENST00000554615 STIM1Q13586 685 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 MCM6Q14566 821 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 ZNF268Q14587 947 aaPredicted RBP3.76□□□□□ -1.81
SEC23A-207ENST00000554615 SLMAPQ14BN4 828 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 DLGAP5Q15398 846 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 QRICH1Q2TAL8 776 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 ZNF569Q5MCW4 686 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 SOGA3Q5TF21 947 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 RNF43Q68DV7 783 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 NCAPH2Q6IBW4 605 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 PLEKHA7Q6IQ23 1121 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 ANKRD35Q8N283 1001 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 CSGALNACT2Q8N6G5 542 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 FNIP1Q8TF40 1166 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 HDAC7Q8WUI4 952 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 REEP2Q9BRK0 252 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 ZKSCAN3Q9BRR0 538 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 TANGO6Q9C0B7 1094 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 KIAA1683Q9H0B3 1180 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 MYLK2Q9H1R3 596 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 CNOT10Q9H9A5 744 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms