RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 ZNF274Q96GC6 653 aaPredicted RBP25.03■■□□□ 1.6
GABRB3-206ENST00000554556 ZSWIM6Q9HCJ5 1215 aa25.03■■□□□ 1.6
GABRB3-206ENST00000554556 CYP46A1Q9Y6A2 500 aa25.03■■□□□ 1.6
GABRB3-206ENST00000554556 CARNS1A5YM72 827 aa25.02■■□□□ 1.6
GABRB3-206ENST00000554556 SKIP12755 728 aa25.02■■□□□ 1.6
GABRB3-206ENST00000554556 ALDH7A1P49419 539 aaKnown RBP25.02■■□□□ 1.6
GABRB3-206ENST00000554556 TOB2Q14106 344 aaPredicted RBP25.02■■□□□ 1.6
GABRB3-206ENST00000554556 SMC1AQ14683 1233 aaKnown RBP25.02■■□□□ 1.6
GABRB3-206ENST00000554556 SLC39A11Q8N1S5 342 aa25.02■■□□□ 1.6
GABRB3-206ENST00000554556 HELQQ8TDG4 1101 aa25.02■■□□□ 1.6
GABRB3-206ENST00000554556 CASP10Q92851 521 aa25.02■■□□□ 1.6
GABRB3-206ENST00000554556 GJA10Q969M2 543 aa25.02■■□□□ 1.6
GABRB3-206ENST00000554556 JPH2Q9BR39 696 aaPredicted RBP25.02■■□□□ 1.6
GABRB3-206ENST00000554556 S1PR5Q9H228 398 aa25.02■■□□□ 1.6
GABRB3-206ENST00000554556 C5orf42Q9H799 3197 aa25.01■■□□□ 1.59
GABRB3-206ENST00000554556 HIDE1A8MVS5 230 aa25.01■■□□□ 1.59
GABRB3-206ENST00000554556 TDP2O95551 362 aa25.01■■□□□ 1.59
GABRB3-206ENST00000554556 SFPQP23246 707 aaKnown RBP eCLIP25.01■■□□□ 1.59
GABRB3-206ENST00000554556 PBX3P40426 434 aa25.01■■□□□ 1.59
GABRB3-206ENST00000554556 TPRNQ4KMQ1 711 aa25.01■■□□□ 1.59
GABRB3-206ENST00000554556 LLGL2Q6P1M3 1020 aa25.01■■□□□ 1.59
GABRB3-206ENST00000554556 ZNF410Q86VK4 478 aa25.01■■□□□ 1.59
GABRB3-206ENST00000554556 SUGP1Q8IWZ8 645 aaKnown RBP25.01■■□□□ 1.59
GABRB3-206ENST00000554556 DAGLBQ8NCG7 672 aa25.01■■□□□ 1.59
GABRB3-206ENST00000554556 ZNF318Q5VUA4 2279 aa25.01■■□□□ 1.59
GABRB3-206ENST00000554556 A0A087WZ62 844 aa25■■□□□ 1.59
GABRB3-206ENST00000554556 IGKV6-21A0A0C4DH24 114 aa25■■□□□ 1.59
GABRB3-206ENST00000554556 DDX11L8A8MPP1 907 aa25■■□□□ 1.59
GABRB3-206ENST00000554556 MRE11P49959 708 aa25■■□□□ 1.59
GABRB3-206ENST00000554556 DRP2Q13474 957 aa25■■□□□ 1.59
GABRB3-206ENST00000554556 NONOQ15233 471 aaKnown RBP eCLIP25■■□□□ 1.59
GABRB3-206ENST00000554556 SYCE2Q6PIF2 218 aa25■■□□□ 1.59
GABRB3-206ENST00000554556 B3GNT9Q6UX72 402 aa25■■□□□ 1.59
GABRB3-206ENST00000554556 MRPL43Q8N983 215 aaKnown RBP25■■□□□ 1.59
GABRB3-206ENST00000554556 MBOAT7Q96N66 472 aa25■■□□□ 1.59
GABRB3-206ENST00000554556 PRRX2Q99811 253 aa25■■□□□ 1.59
GABRB3-206ENST00000554556 FDXACB1Q9BRP7 624 aaPredicted RBP25■■□□□ 1.59
GABRB3-206ENST00000554556 TRAIPQ9BWF2 469 aa25■■□□□ 1.59
GABRB3-206ENST00000554556 SUCLA2Q9P2R7 463 aaPredicted RBP25■■□□□ 1.59
GABRB3-206ENST00000554556 M0R2N6 131 aa24.99■■□□□ 1.59
GABRB3-206ENST00000554556 DKC1O60832 514 aaKnown RBP eCLIP24.99■■□□□ 1.59
GABRB3-206ENST00000554556 CSDE1O75534 798 aaKnown RBP24.99■■□□□ 1.59
GABRB3-206ENST00000554556 STBD1O95210 358 aa24.99■■□□□ 1.59
GABRB3-206ENST00000554556 PHKA2P46019 1235 aa24.99■■□□□ 1.59
GABRB3-206ENST00000554556 BCAR1P56945 870 aa24.99■■□□□ 1.59
GABRB3-206ENST00000554556 PSMC5P62195 406 aa24.99■■□□□ 1.59
GABRB3-206ENST00000554556 SIGLEC14Q08ET2 396 aa24.99■■□□□ 1.59
GABRB3-206ENST00000554556 TWF2Q6IBS0 349 aaKnown RBP24.99■■□□□ 1.59
GABRB3-206ENST00000554556 CES5AQ6NT32 575 aa24.99■■□□□ 1.59
GABRB3-206ENST00000554556 KRT25Q7Z3Z0 450 aa24.99■■□□□ 1.59
GABRB3-206ENST00000554556 TMEM169Q96HH4 297 aa24.99■■□□□ 1.59
GABRB3-206ENST00000554556 CEP89Q96ST8 783 aa24.99■■□□□ 1.59
GABRB3-206ENST00000554556 APOL5Q9BWW9 433 aa24.99■■□□□ 1.59
GABRB3-206ENST00000554556 DDX25Q9UHL0 483 aaKnown RBP24.99■■□□□ 1.59
GABRB3-206ENST00000554556 MAFO75444 373 aaPredicted RBP24.98■■□□□ 1.59
GABRB3-206ENST00000554556 RHPN2Q8IUC4 686 aa24.98■■□□□ 1.59
GABRB3-206ENST00000554556 TMEM87AQ8NBN3 555 aa24.98■■□□□ 1.59
GABRB3-206ENST00000554556 ETNPPLQ8TBG4 499 aa24.98■■□□□ 1.59
GABRB3-206ENST00000554556 TM6SF1Q9BZW5 370 aa24.98■■□□□ 1.59
GABRB3-206ENST00000554556 NR2E1Q9Y466 385 aa24.98■■□□□ 1.59
GABRB3-206ENST00000554556 C2orf71A6NGG8 1288 aa24.97■■□□□ 1.59
GABRB3-206ENST00000554556 CXCL14O95715 111 aa24.97■■□□□ 1.59
GABRB3-206ENST00000554556 CA8P35219 290 aa24.97■■□□□ 1.59
GABRB3-206ENST00000554556 ITIH3Q06033 890 aa24.97■■□□□ 1.59
GABRB3-206ENST00000554556 EXOC8Q8IYI6 725 aa24.97■■□□□ 1.59
GABRB3-206ENST00000554556 FBXL6Q8N531 539 aa24.97■■□□□ 1.59
GABRB3-206ENST00000554556 NECTIN4Q96NY8 510 aa24.97■■□□□ 1.59
GABRB3-206ENST00000554556 SH2D3AQ9BRG2 576 aa24.97■■□□□ 1.59
GABRB3-206ENST00000554556 PIN4Q9Y237 131 aaKnown RBP24.97■■□□□ 1.59
GABRB3-206ENST00000554556 HCFC2Q9Y5Z7 792 aa24.97■■□□□ 1.59
GABRB3-206ENST00000554556 TMEM150BA6NC51 233 aa24.96■■□□□ 1.59
GABRB3-206ENST00000554556 NT5C1B-RDH14C9J2C7 533 aa24.96■■□□□ 1.59
GABRB3-206ENST00000554556 RAB27AP51159 221 aa24.96■■□□□ 1.59
GABRB3-206ENST00000554556 STK3Q13188 491 aa24.96■■□□□ 1.59
GABRB3-206ENST00000554556 GIT2Q14161 759 aa24.96■■□□□ 1.59
GABRB3-206ENST00000554556 PTPN21Q16825 1174 aa24.96■■□□□ 1.59
GABRB3-206ENST00000554556 INF2Q27J81 1249 aa24.96■■□□□ 1.59
GABRB3-206ENST00000554556 GLB1LQ6UWU2 654 aa24.96■■□□□ 1.59
GABRB3-206ENST00000554556 CATSPER4Q7RTX7 472 aa24.96■■□□□ 1.59
GABRB3-206ENST00000554556 ZBTB33Q86T24 672 aa24.96■■□□□ 1.59
GABRB3-206ENST00000554556 FAM20AQ96MK3 541 aa24.96■■□□□ 1.59
GABRB3-206ENST00000554556 CLASP2O75122 1294 aaKnown RBP24.95■■□□□ 1.58
GABRB3-206ENST00000554556 ZC3H11AO75152 810 aaKnown RBP eCLIP24.95■■□□□ 1.58
GABRB3-206ENST00000554556 XBP1P17861 261 aa24.95■■□□□ 1.58
GABRB3-206ENST00000554556 QARSP47897 775 aaKnown RBP24.95■■□□□ 1.58
GABRB3-206ENST00000554556 LETM2Q2VYF4 491 aa24.95■■□□□ 1.58
GABRB3-206ENST00000554556 VPS52Q8N1B4 723 aa24.95■■□□□ 1.58
GABRB3-206ENST00000554556 PGBD4Q96DM1 585 aa24.95■■□□□ 1.58
GABRB3-206ENST00000554556 NLRP4Q96MN2 994 aa24.95■■□□□ 1.58
GABRB3-206ENST00000554556 LARP6Q9BRS8 491 aaKnown RBP24.95■■□□□ 1.58
GABRB3-206ENST00000554556 SLKQ9H2G2 1235 aaPredicted RBP24.95■■□□□ 1.58
GABRB3-206ENST00000554556 ADAM7Q9H2U9 754 aa24.95■■□□□ 1.58
GABRB3-206ENST00000554556 FAM105AQ9NUU6 356 aa24.95■■□□□ 1.58
GABRB3-206ENST00000554556 CCDC194A0A1B0GVG4 234 aa24.94■■□□□ 1.58
GABRB3-206ENST00000554556 ZNF623O75123 536 aa24.94■■□□□ 1.58
GABRB3-206ENST00000554556 CDKL5O76039 1030 aa24.94■■□□□ 1.58
GABRB3-206ENST00000554556 POLGP54098 1239 aaPredicted RBP24.94■■□□□ 1.58
GABRB3-206ENST00000554556 PTPN5P54829 565 aa24.94■■□□□ 1.58
GABRB3-206ENST00000554556 RNASELQ05823 741 aaKnown RBP24.94■■□□□ 1.58
GABRB3-206ENST00000554556 PPP2R5CQ13362 524 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms