RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 CCDC144CPQ8IYA2 1237 aa7.74□□□□□ -1.17
KTN1-213ENST00000554306 FANCBQ8NB91 859 aa7.74□□□□□ -1.17
KTN1-213ENST00000554306 GMCL1P1Q8NEA9 526 aa7.74□□□□□ -1.17
KTN1-213ENST00000554306 DCAF4Q8WV16 495 aa7.74□□□□□ -1.17
KTN1-213ENST00000554306 MAP3K14Q99558 947 aa7.74□□□□□ -1.17
KTN1-213ENST00000554306 LZTS2Q9BRK4 669 aa7.74□□□□□ -1.17
KTN1-213ENST00000554306 MYL10Q9BUA6 226 aa7.74□□□□□ -1.17
KTN1-213ENST00000554306 VCPKMTQ9H867 229 aa7.74□□□□□ -1.17
KTN1-213ENST00000554306 TMOD4Q9NZQ9 345 aa7.74□□□□□ -1.17
KTN1-213ENST00000554306 TPX2Q9ULW0 747 aaKnown RBP7.74□□□□□ -1.17
KTN1-213ENST00000554306 TMX2Q9Y320 296 aa7.74□□□□□ -1.17
KTN1-213ENST00000554306 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.74□□□□□ -1.17
KTN1-213ENST00000554306 PASKQ96RG2 1323 aa7.74□□□□□ -1.17
KTN1-213ENST00000554306 TRIM75PA6NK02 468 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 CDKL5O76039 1030 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 RXRAP19793 462 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 ECE1P42892 770 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 SLC1A4P43007 532 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 BACE1P56817 501 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 HUNKP57058 714 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 AKAP17AQ02040 695 aaKnown RBP7.73□□□□□ -1.17
KTN1-213ENST00000554306 ZP2Q05996 745 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 TROAPQ12815 778 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 PPIL2Q13356 520 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 GRM4Q14833 912 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 ZYXQ15942 572 aaKnown RBP7.73□□□□□ -1.17
KTN1-213ENST00000554306 ASPRV1Q53RT3 343 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 SFRP5Q5T4F7 317 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 CST9Q5W186 159 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 DNAJC14Q6Y2X3 702 aaPredicted RBP7.73□□□□□ -1.17
KTN1-213ENST00000554306 AGMOQ6ZNB7 445 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 CCDC84Q86UT8 332 aaPredicted RBP7.73□□□□□ -1.17
KTN1-213ENST00000554306 RAB11FIP4Q86YS3 637 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 SIAH1Q8IUQ4 282 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 CCDC83Q8IWF9 413 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 NECAB1Q8N987 351 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 ACER1Q8TDN7 264 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 FAM168AQ92567 244 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 LPAR1Q92633 364 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 OPTNQ96CV9 577 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 CLMNQ96JQ2 1002 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 COX4I2Q96KJ9 171 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 MIPEPQ99797 713 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 KIAA1683Q9H0B3 1180 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.73□□□□□ -1.17
KTN1-213ENST00000554306 ABT1Q9ULW3 272 aaKnown RBP7.73□□□□□ -1.17
KTN1-213ENST00000554306 AFG3L2Q9Y4W6 797 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 PTPRFP10586 1907 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 SRCAPQ6ZRS2 3230 aa7.73□□□□□ -1.17
KTN1-213ENST00000554306 A0A1W2PRG0 241 aa7.72□□□□□ -1.17
KTN1-213ENST00000554306 CXCL11O14625 94 aa7.72□□□□□ -1.17
KTN1-213ENST00000554306 NDUFB10O96000 172 aa7.72□□□□□ -1.17
KTN1-213ENST00000554306 ZNF865P0CJ78 1059 aaPredicted RBP7.72□□□□□ -1.17
KTN1-213ENST00000554306 PDHBP11177 359 aa7.72□□□□□ -1.17
KTN1-213ENST00000554306 LIG3P49916 1009 aa7.72□□□□□ -1.17
KTN1-213ENST00000554306 SSRP1Q08945 709 aaKnown RBP7.72□□□□□ -1.17
KTN1-213ENST00000554306 ZNF543Q08ER8 600 aa7.72□□□□□ -1.17
KTN1-213ENST00000554306 SCRN1Q12765 414 aa7.72□□□□□ -1.17
KTN1-213ENST00000554306 IKQ13123 557 aaPredicted RBP7.72□□□□□ -1.17
KTN1-213ENST00000554306 GPATCH4Q5T3I0 446 aaKnown RBP7.72□□□□□ -1.17
KTN1-213ENST00000554306 RGMBQ6NW40 437 aa7.72□□□□□ -1.17
KTN1-213ENST00000554306 FASTKD5Q7L8L6 764 aaKnown RBP7.72□□□□□ -1.17
KTN1-213ENST00000554306 CHURC1Q8WUH1 139 aa7.72□□□□□ -1.17
KTN1-213ENST00000554306 GTF3C6Q969F1 213 aa7.72□□□□□ -1.17
KTN1-213ENST00000554306 WNK4Q96J92 1243 aa7.72□□□□□ -1.17
KTN1-213ENST00000554306 IPO9Q96P70 1041 aaKnown RBP7.72□□□□□ -1.17
KTN1-213ENST00000554306 LLPHQ9BRT6 129 aaKnown RBP7.72□□□□□ -1.17
KTN1-213ENST00000554306 MIR1-1HGQ9H1L0 117 aa7.72□□□□□ -1.17
KTN1-213ENST00000554306 NCOA5Q9HCD5 579 aaKnown RBP7.72□□□□□ -1.17
KTN1-213ENST00000554306 LMCD1Q9NZU5 365 aa7.72□□□□□ -1.17
KTN1-213ENST00000554306 SMC3Q9UQE7 1217 aa7.72□□□□□ -1.17
KTN1-213ENST00000554306 KIF3AQ9Y496 699 aa7.72□□□□□ -1.17
KTN1-213ENST00000554306 PCDHB5Q9Y5E4 795 aa7.72□□□□□ -1.17
KTN1-213ENST00000554306 FRMPD2Q68DX3 1309 aaPredicted RBP7.72□□□□□ -1.17
KTN1-213ENST00000554306 FAM155AB1AL88 458 aaPredicted RBP7.71□□□□□ -1.18
KTN1-213ENST00000554306 KLRF2D3W0D1 207 aa7.71□□□□□ -1.18
KTN1-213ENST00000554306 WDR46O15213 610 aaKnown RBP7.71□□□□□ -1.18
KTN1-213ENST00000554306 LARGE1O95461 756 aa7.71□□□□□ -1.18
KTN1-213ENST00000554306 CST3P01034 146 aaPredicted RBP7.71□□□□□ -1.18
KTN1-213ENST00000554306 SNHG28P0DPA3 235 aa7.71□□□□□ -1.18
KTN1-213ENST00000554306 SMARCA1P28370 1054 aa7.71□□□□□ -1.18
KTN1-213ENST00000554306 GRK4P32298 578 aa7.71□□□□□ -1.18
KTN1-213ENST00000554306 GTF2A2P52657 109 aa7.71□□□□□ -1.18
KTN1-213ENST00000554306 HMGCS2P54868 508 aa7.71□□□□□ -1.18
KTN1-213ENST00000554306 HMGN5P82970 282 aaKnown RBP7.71□□□□□ -1.18
KTN1-213ENST00000554306 PABPC4Q13310 644 aaKnown RBP eCLIP7.71□□□□□ -1.18
KTN1-213ENST00000554306 SNAPC2Q13487 334 aa7.71□□□□□ -1.18
KTN1-213ENST00000554306 CUL4AQ13619 759 aa7.71□□□□□ -1.18
KTN1-213ENST00000554306 SEPT6Q14141 434 aa7.71□□□□□ -1.18
KTN1-213ENST00000554306 NKG7Q16617 165 aa7.71□□□□□ -1.18
KTN1-213ENST00000554306 LETMD1Q6P1Q0 360 aa7.71□□□□□ -1.18
KTN1-213ENST00000554306 GADL1Q6ZQY3 521 aa7.71□□□□□ -1.18
KTN1-213ENST00000554306 KCTD1Q719H9 257 aa7.71□□□□□ -1.18
KTN1-213ENST00000554306 FAM160B2Q86V87 743 aa7.71□□□□□ -1.18
KTN1-213ENST00000554306 SPICE1Q8N0Z3 855 aa7.71□□□□□ -1.18
KTN1-213ENST00000554306 MFSD4AQ8N468 514 aa7.71□□□□□ -1.18
KTN1-213ENST00000554306 FAM184AQ8NB25 1140 aa7.71□□□□□ -1.18
KTN1-213ENST00000554306 TMEM40Q8WWA1 233 aa7.71□□□□□ -1.18
KTN1-213ENST00000554306 INTS4Q96HW7 963 aaKnown RBP7.71□□□□□ -1.18
KTN1-213ENST00000554306 TANGO6Q9C0B7 1094 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms