RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 SLC22A17Q8WUG5 538 aa8.74□□□□□ -1.01
ABCD4-220ENST00000553998 RSPH1Q8WYR4 309 aa8.74□□□□□ -1.01
ABCD4-220ENST00000553998 WASF1Q92558 559 aa8.74□□□□□ -1.01
ABCD4-220ENST00000553998 TMX3Q96JJ7 454 aa8.74□□□□□ -1.01
ABCD4-220ENST00000553998 MFSD1Q9H3U5 465 aa8.74□□□□□ -1.01
ABCD4-220ENST00000553998 EP300Q09472 2414 aaPredicted RBP8.73□□□□□ -1.01
ABCD4-220ENST00000553998 A0A0U1RQF3 1178 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 ESYT2A0FGR8 921 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 CARNS1A5YM72 827 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 SPDYE3A6NKU9 549 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 MEIS1O00470 390 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 CD2BP2O95400 341 aaKnown RBP8.73□□□□□ -1.01
ABCD4-220ENST00000553998 DEXIO95424 95 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 C22orf31O95567 290 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 CXCL14O95715 111 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 CCNE2O96020 404 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 LMNAP02545 664 aaKnown RBP8.73□□□□□ -1.01
ABCD4-220ENST00000553998 ATP4AP20648 1035 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 POLGP54098 1239 aaPredicted RBP8.73□□□□□ -1.01
ABCD4-220ENST00000553998 HMGN5P82970 282 aaKnown RBP8.73□□□□□ -1.01
ABCD4-220ENST00000553998 TDGQ13569 410 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 PUM1Q14671 1186 aaKnown RBP eCLIP8.73□□□□□ -1.01
ABCD4-220ENST00000553998 CEP55Q53EZ4 464 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 GPR149Q86SP6 731 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 ECHDC2Q86YB7 292 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 LINC01465Q8N7H1 131 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 C12orf76Q8N812 135 aaPredicted RBP8.73□□□□□ -1.01
ABCD4-220ENST00000553998 NECAB1Q8N987 351 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 NSUN7Q8NE18 718 aaKnown RBP8.73□□□□□ -1.01
ABCD4-220ENST00000553998 CCDC12Q8WUD4 166 aaPredicted RBP8.73□□□□□ -1.01
ABCD4-220ENST00000553998 PIBF1Q8WXW3 757 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 PHKBQ93100 1093 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 SDF4Q9BRK5 362 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 SLC26A6Q9BXS9 759 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 ZBP1Q9H171 429 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 GLT8D2Q9H1C3 349 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 AGO4Q9HCK5 861 aaKnown RBP8.73□□□□□ -1.01
ABCD4-220ENST00000553998 SH3GLB2Q9NR46 395 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 BARHL2Q9NY43 387 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 DLL3Q9NYJ7 618 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 PKD2L1Q9P0L9 805 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 WNT16Q9UBV4 365 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 DUSP12Q9UNI6 340 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 WDR81Q562E7 1941 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 EPG5Q9HCE0 2579 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 NCOR2Q9Y618 2525 aa8.73□□□□□ -1.01
ABCD4-220ENST00000553998 PLXNA4Q9HCM2 1894 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 DHX15O43143 795 aaKnown RBP8.72□□□□□ -1.01
ABCD4-220ENST00000553998 CTDNEP1O95476 244 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 WEE2P0C1S8 567 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 CTSAP10619 480 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 EIF4BP23588 611 aaKnown RBP8.72□□□□□ -1.01
ABCD4-220ENST00000553998 PBX3P40426 434 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 ST3GAL1Q11201 340 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 BMS1Q14692 1282 aaKnown RBP8.72□□□□□ -1.01
ABCD4-220ENST00000553998 UBE2SQ16763 222 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 KIZQ2M2Z5 673 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 CLLU1OSQ5K130 101 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 RARS2Q5T160 578 aaKnown RBP8.72□□□□□ -1.01
ABCD4-220ENST00000553998 WWC2Q6AWC2 1192 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 NIPA1Q7RTP0 329 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 OTOP3Q7RTS5 596 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 DGLUCYQ7Z3D6 616 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 HEATR3Q7Z4Q2 680 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 DDX53Q86TM3 631 aaKnown RBP8.72□□□□□ -1.01
ABCD4-220ENST00000553998 CCDC83Q8IWF9 413 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 FLCNQ8NFG4 579 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 CCDC148Q8NFR7 591 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 BBXQ8WY36 941 aaPredicted RBP8.72□□□□□ -1.01
ABCD4-220ENST00000553998 ACSF2Q96CM8 615 aaPredicted RBP8.72□□□□□ -1.01
ABCD4-220ENST00000553998 OSMRQ99650 979 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 TRAIPQ9BWF2 469 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 RHOBTB2Q9BYZ6 727 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 ADAMTS10Q9H324 1103 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 KCNK12Q9HB15 430 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 IGSF9Q9P2J2 1179 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 ORC3Q9UBD5 711 aaPredicted RBP8.72□□□□□ -1.01
ABCD4-220ENST00000553998 DBR1Q9UK59 544 aaKnown RBP8.72□□□□□ -1.01
ABCD4-220ENST00000553998 GINS2Q9Y248 185 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 KIF3AQ9Y496 699 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.72□□□□□ -1.01
ABCD4-220ENST00000553998 MAFBQ9Y5Q3 323 aaPredicted RBP8.72□□□□□ -1.01
ABCD4-220ENST00000553998 KIAA1671Q9BY89 1806 aa8.72□□□□□ -1.01
ABCD4-220ENST00000553998 hCG_1642624A0A1W2PR95 340 aa8.71□□□□□ -1.02
ABCD4-220ENST00000553998 K7ELQ4 463 aaPredicted RBP8.71□□□□□ -1.02
ABCD4-220ENST00000553998 PAPLNO95428 1278 aa8.71□□□□□ -1.02
ABCD4-220ENST00000553998 FOSP01100 380 aaPredicted RBP8.71□□□□□ -1.02
ABCD4-220ENST00000553998 EPCAMP16422 314 aa8.71□□□□□ -1.02
ABCD4-220ENST00000553998 ZSCAN20P17040 1043 aaPredicted RBP8.71□□□□□ -1.02
ABCD4-220ENST00000553998 XBP1P17861 261 aa8.71□□□□□ -1.02
ABCD4-220ENST00000553998 IBSPP21815 317 aaPredicted RBP8.71□□□□□ -1.02
ABCD4-220ENST00000553998 GNA11P29992 359 aa8.71□□□□□ -1.02
ABCD4-220ENST00000553998 ALDH7A1P49419 539 aaKnown RBP8.71□□□□□ -1.02
ABCD4-220ENST00000553998 NAPAP54920 295 aa8.71□□□□□ -1.02
ABCD4-220ENST00000553998 CUL4AQ13619 759 aa8.71□□□□□ -1.02
ABCD4-220ENST00000553998 FAM160B1Q5W0V3 765 aa8.71□□□□□ -1.02
ABCD4-220ENST00000553998 GALNT17Q6IS24 598 aa8.71□□□□□ -1.02
ABCD4-220ENST00000553998 KANK3Q6NY19 840 aa8.71□□□□□ -1.02
ABCD4-220ENST00000553998 C15orf39Q6ZRI6 1047 aa8.71□□□□□ -1.02
ABCD4-220ENST00000553998 PPFIBP1Q86W92 1011 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms