RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 DSC3Q14574 896 aa25.84■■□□□ 1.73
NEK9-203ENST00000553945 FAM102BQ5T8I3 360 aa25.84■■□□□ 1.73
NEK9-203ENST00000553945 ASAP3Q8TDY4 903 aa25.84■■□□□ 1.73
NEK9-203ENST00000553945 PNMA5Q96PV4 448 aa25.84■■□□□ 1.73
NEK9-203ENST00000553945 PLIN2Q99541 437 aa25.84■■□□□ 1.73
NEK9-203ENST00000553945 GPRC5CQ9NQ84 441 aa25.84■■□□□ 1.73
NEK9-203ENST00000553945 C1orf112Q9NSG2 853 aa25.84■■□□□ 1.73
NEK9-203ENST00000553945 CDH23Q9H251 3354 aa25.84■■□□□ 1.73
NEK9-203ENST00000553945 SLC34A2O95436 690 aa25.83■■□□□ 1.73
NEK9-203ENST00000553945 EYA4O95677 639 aa25.83■■□□□ 1.73
NEK9-203ENST00000553945 CYP11B2P19099 503 aa25.83■■□□□ 1.73
NEK9-203ENST00000553945 PHKA2P46019 1235 aa25.83■■□□□ 1.73
NEK9-203ENST00000553945 SARSP49591 514 aaKnown RBP25.83■■□□□ 1.73
NEK9-203ENST00000553945 PKP1Q13835 747 aa25.83■■□□□ 1.73
NEK9-203ENST00000553945 TFDP1Q14186 410 aa25.83■■□□□ 1.73
NEK9-203ENST00000553945 HYIQ5T013 277 aa25.83■■□□□ 1.73
NEK9-203ENST00000553945 SLC24A5Q71RS6 500 aa25.83■■□□□ 1.73
NEK9-203ENST00000553945 CATSPER4Q7RTX7 472 aa25.83■■□□□ 1.73
NEK9-203ENST00000553945 KCNK18Q7Z418 384 aa25.83■■□□□ 1.73
NEK9-203ENST00000553945 NPAS4Q8IUM7 802 aa25.83■■□□□ 1.73
NEK9-203ENST00000553945 CDX2Q99626 313 aaPredicted RBP25.83■■□□□ 1.73
NEK9-203ENST00000553945 CERS4Q9HA82 394 aa25.83■■□□□ 1.73
NEK9-203ENST00000553945 LRFN2Q9ULH4 789 aa25.83■■□□□ 1.73
NEK9-203ENST00000553945 TTC3P53804 2025 aa25.83■■□□□ 1.73
NEK9-203ENST00000553945 F13A1P00488 732 aa25.82■■□□□ 1.72
NEK9-203ENST00000553945 STAG3L1P0CL83 205 aa25.82■■□□□ 1.72
NEK9-203ENST00000553945 GLRA2P23416 452 aa25.82■■□□□ 1.72
NEK9-203ENST00000553945 GRB10Q13322 594 aa25.82■■□□□ 1.72
NEK9-203ENST00000553945 CAPSQ13938 189 aa25.82■■□□□ 1.72
NEK9-203ENST00000553945 FOXD4L6Q3SYB3 417 aaPredicted RBP25.82■■□□□ 1.72
NEK9-203ENST00000553945 FOXD4L3Q6VB84 417 aaPredicted RBP25.82■■□□□ 1.72
NEK9-203ENST00000553945 SRGAP1Q7Z6B7 1085 aa25.82■■□□□ 1.72
NEK9-203ENST00000553945 ZNF396Q96N95 335 aaPredicted RBP25.82■■□□□ 1.72
NEK9-203ENST00000553945 NT5C3AQ9H0P0 336 aa25.82■■□□□ 1.72
NEK9-203ENST00000553945 PRDM12Q9H4Q4 367 aa25.82■■□□□ 1.72
NEK9-203ENST00000553945 TFIP11Q9UBB9 837 aaKnown RBP25.82■■□□□ 1.72
NEK9-203ENST00000553945 FBXO2Q9UK22 296 aaPredicted RBP25.82■■□□□ 1.72
NEK9-203ENST00000553945 C9IYK1 514 aa25.81■■□□□ 1.72
NEK9-203ENST00000553945 MYLIPQ8WY64 445 aa25.81■■□□□ 1.72
NEK9-203ENST00000553945 CALML4Q96GE6 196 aa25.81■■□□□ 1.72
NEK9-203ENST00000553945 CSRNP2Q9H175 543 aa25.81■■□□□ 1.72
NEK9-203ENST00000553945 MINDY3Q9H8M7 445 aa25.81■■□□□ 1.72
NEK9-203ENST00000553945 RNF216Q9NWF9 866 aaPredicted RBP25.81■■□□□ 1.72
NEK9-203ENST00000553945 PCDHB7Q9Y5E2 793 aa25.81■■□□□ 1.72
NEK9-203ENST00000553945 SRPRBQ9Y5M8 271 aaKnown RBP25.81■■□□□ 1.72
NEK9-203ENST00000553945 LINC01553A4QN01 128 aa25.8■■□□□ 1.72
NEK9-203ENST00000553945 SLC26A4O43511 780 aa25.8■■□□□ 1.72
NEK9-203ENST00000553945 PTENP60484 403 aa25.8■■□□□ 1.72
NEK9-203ENST00000553945 SLC39A14Q15043 492 aa25.8■■□□□ 1.72
NEK9-203ENST00000553945 STK38Q15208 465 aa25.8■■□□□ 1.72
NEK9-203ENST00000553945 SPRED2Q7Z698 418 aa25.8■■□□□ 1.72
NEK9-203ENST00000553945 RASSF8Q8NHQ8 419 aa25.8■■□□□ 1.72
NEK9-203ENST00000553945 SP7Q8TDD2 431 aaPredicted RBP25.8■■□□□ 1.72
NEK9-203ENST00000553945 ARNTL2Q8WYA1 636 aa25.8■■□□□ 1.72
NEK9-203ENST00000553945 PIN4Q9Y237 131 aaKnown RBP25.8■■□□□ 1.72
NEK9-203ENST00000553945 DGKIO75912 1065 aa25.79■■□□□ 1.72
NEK9-203ENST00000553945 SSBP05455 408 aaKnown RBP eCLIP25.79■■□□□ 1.72
NEK9-203ENST00000553945 TMEM119Q4V9L6 283 aa25.79■■□□□ 1.72
NEK9-203ENST00000553945 SPECC1Q5M775 1068 aa25.79■■□□□ 1.72
NEK9-203ENST00000553945 CRIPAKQ8N1N5 446 aa25.79■■□□□ 1.72
NEK9-203ENST00000553945 CLIC6Q96NY7 704 aa25.79■■□□□ 1.72
NEK9-203ENST00000553945 POLD4Q9HCU8 107 aa25.79■■□□□ 1.72
NEK9-203ENST00000553945 DAXXQ9UER7 740 aaPredicted RBP25.79■■□□□ 1.72
NEK9-203ENST00000553945 MTUS1Q9ULD2 1270 aa25.79■■□□□ 1.72
NEK9-203ENST00000553945 TRANK1O15050 2925 aa25.79■■□□□ 1.72
NEK9-203ENST00000553945 LRRIQ4A6NIV6 560 aa25.78■■□□□ 1.72
NEK9-203ENST00000553945 NASPP49321 788 aaPredicted RBP25.78■■□□□ 1.72
NEK9-203ENST00000553945 FAM189BP81408 668 aa25.78■■□□□ 1.72
NEK9-203ENST00000553945 POU5F1BQ06416 359 aa25.78■■□□□ 1.72
NEK9-203ENST00000553945 KCTD17Q8N5Z5 321 aa25.78■■□□□ 1.72
NEK9-203ENST00000553945 CHST12Q9NRB3 414 aa25.78■■□□□ 1.72
NEK9-203ENST00000553945 DACT1Q9NYF0 836 aa25.78■■□□□ 1.72
NEK9-203ENST00000553945 INO80B-WBP1J3KQ70 363 aa25.77■■□□□ 1.72
NEK9-203ENST00000553945 ERLIN2O94905 339 aa25.77■■□□□ 1.72
NEK9-203ENST00000553945 BTG3Q14201 252 aaPredicted RBP25.77■■□□□ 1.72
NEK9-203ENST00000553945 KARSQ15046 597 aaKnown RBP25.77■■□□□ 1.72
NEK9-203ENST00000553945 TWF2Q6IBS0 349 aaKnown RBP25.77■■□□□ 1.72
NEK9-203ENST00000553945 IFNLR1Q8IU57 520 aaPredicted RBP25.77■■□□□ 1.72
NEK9-203ENST00000553945 FIBCD1Q8N539 461 aa25.77■■□□□ 1.72
NEK9-203ENST00000553945 KRI1Q8N9T8 703 aaKnown RBP25.77■■□□□ 1.72
NEK9-203ENST00000553945 KIFAP3Q92845 792 aa25.77■■□□□ 1.72
NEK9-203ENST00000553945 ZNF689Q96CS4 500 aaPredicted RBP25.77■■□□□ 1.72
NEK9-203ENST00000553945 EPSTI1Q96J88 318 aa25.77■■□□□ 1.72
NEK9-203ENST00000553945 TGS1Q96RS0 853 aaKnown RBP25.77■■□□□ 1.72
NEK9-203ENST00000553945 RUSC1Q9BVN2 902 aa25.77■■□□□ 1.72
NEK9-203ENST00000553945 RC3H2Q9HBD1 1191 aaKnown RBP25.77■■□□□ 1.72
NEK9-203ENST00000553945 AGPAT5Q9NUQ2 364 aa25.77■■□□□ 1.72
NEK9-203ENST00000553945 TMEM161AQ9NX61 479 aa25.77■■□□□ 1.72
NEK9-203ENST00000553945 MORC2Q9Y6X9 1032 aaPredicted RBP25.77■■□□□ 1.72
NEK9-203ENST00000553945 ADGRA3Q8IWK6 1321 aa25.77■■□□□ 1.72
NEK9-203ENST00000553945 COL4A6Q14031 1691 aa25.77■■□□□ 1.72
NEK9-203ENST00000553945 PLA2G4BP0C869 781 aa25.76■■□□□ 1.71
NEK9-203ENST00000553945 FOSL2P15408 326 aa25.76■■□□□ 1.71
NEK9-203ENST00000553945 GATMP50440 423 aa25.76■■□□□ 1.71
NEK9-203ENST00000553945 ERVK-21P61565 698 aa25.76■■□□□ 1.71
NEK9-203ENST00000553945 PAN2Q504Q3 1202 aaKnown RBP25.76■■□□□ 1.71
NEK9-203ENST00000553945 RINT1Q6NUQ1 792 aa25.76■■□□□ 1.71
NEK9-203ENST00000553945 USP49Q70CQ1 688 aa25.76■■□□□ 1.71
NEK9-203ENST00000553945 ECHDC2Q86YB7 292 aa25.76■■□□□ 1.71
NEK9-203ENST00000553945 SYT2Q8N9I0 419 aaPredicted RBP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms