RNA–Protein interactions for RNA: ENST00000553866.1

CHGA-203, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 889 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-203ENST00000553866 K7ELQ4 463 aaPredicted RBP14.04□□□□□ -0.16
CHGA-203ENST00000553866 STAG3L1P0CL83 205 aa14.04□□□□□ -0.16
CHGA-203ENST00000553866 ATF7P17544 494 aaPredicted RBP14.04□□□□□ -0.16
CHGA-203ENST00000553866 CTNNB1P35222 781 aa14.04□□□□□ -0.16
CHGA-203ENST00000553866 ARL2P36404 184 aa14.04□□□□□ -0.16
CHGA-203ENST00000553866 CCT6AP40227 531 aaKnown RBP14.04□□□□□ -0.16
CHGA-203ENST00000553866 ATP2C1P98194 919 aaPredicted RBP14.04□□□□□ -0.16
CHGA-203ENST00000553866 RILPL1Q5EBL4 403 aa14.04□□□□□ -0.16
CHGA-203ENST00000553866 MAEAQ7L5Y9 396 aa14.04□□□□□ -0.16
CHGA-203ENST00000553866 ECHDC2Q86YB7 292 aa14.04□□□□□ -0.16
CHGA-203ENST00000553866 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.04□□□□□ -0.16
CHGA-203ENST00000553866 ZNF710Q8N1W2 664 aa14.04□□□□□ -0.16
CHGA-203ENST00000553866 CLP1Q92989 425 aaKnown RBP14.04□□□□□ -0.16
CHGA-203ENST00000553866 ATP6V0A4Q9HBG4 840 aa14.04□□□□□ -0.16
CHGA-203ENST00000553866 LRFN2Q9ULH4 789 aa14.04□□□□□ -0.16
CHGA-203ENST00000553866 PCDHB7Q9Y5E2 793 aa14.04□□□□□ -0.16
CHGA-203ENST00000553866 TBKBP1A7MCY6 615 aa14.03□□□□□ -0.16
CHGA-203ENST00000553866 MEIS3P2A8K0S8 358 aa14.03□□□□□ -0.16
CHGA-203ENST00000553866 DGAT1O75907 488 aa14.03□□□□□ -0.16
CHGA-203ENST00000553866 XRCC6P12956 609 aaKnown RBP eCLIP14.03□□□□□ -0.16
CHGA-203ENST00000553866 SYT1P21579 422 aa14.03□□□□□ -0.16
CHGA-203ENST00000553866 GLRA2P23416 452 aa14.03□□□□□ -0.16
CHGA-203ENST00000553866 BMPR1AP36894 532 aa14.03□□□□□ -0.16
CHGA-203ENST00000553866 PRPHP41219 470 aa14.03□□□□□ -0.16
CHGA-203ENST00000553866 CDC42EP1Q00587 391 aa14.03□□□□□ -0.16
CHGA-203ENST00000553866 GPM6BQ13491 265 aa14.03□□□□□ -0.16
CHGA-203ENST00000553866 CAPSQ13938 189 aa14.03□□□□□ -0.16
CHGA-203ENST00000553866 PDIA5Q14554 519 aa14.03□□□□□ -0.16
CHGA-203ENST00000553866 FAM173BQ6P4H8 233 aa14.03□□□□□ -0.16
CHGA-203ENST00000553866 LRRC55Q6ZSA7 311 aa14.03□□□□□ -0.16
CHGA-203ENST00000553866 KCNK18Q7Z418 384 aa14.03□□□□□ -0.16
CHGA-203ENST00000553866 ZNF598Q86UK7 904 aaKnown RBP14.03□□□□□ -0.16
CHGA-203ENST00000553866 CMTR2Q8IYT2 770 aaKnown RBP14.03□□□□□ -0.16
CHGA-203ENST00000553866 RNF149Q8NC42 400 aa14.03□□□□□ -0.16
CHGA-203ENST00000553866 NACC1Q96RE7 527 aa14.03□□□□□ -0.16
CHGA-203ENST00000553866 POLR3FQ9H1D9 316 aaPredicted RBP14.03□□□□□ -0.16
CHGA-203ENST00000553866 TMEM161AQ9NX61 479 aa14.03□□□□□ -0.16
CHGA-203ENST00000553866 DBR1Q9UK59 544 aaKnown RBP14.03□□□□□ -0.16
CHGA-203ENST00000553866 KIAA1024Q9UPX6 916 aa14.03□□□□□ -0.16
CHGA-203ENST00000553866 E9PMD0 336 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 C5orf67F2Z3F1 127 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 H3BNC9 293 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 GRM6O15303 877 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 GAS2O43903 313 aaKnown RBP14.02□□□□□ -0.17
CHGA-203ENST00000553866 ZSCAN20P17040 1043 aaPredicted RBP14.02□□□□□ -0.17
CHGA-203ENST00000553866 GRIN1Q05586 938 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 RESTQ13127 1097 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 LONRF3Q496Y0 759 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 DTHD1Q6ZMT9 781 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 CATSPER4Q7RTX7 472 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 EXOC8Q8IYI6 725 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 RNF169Q8NCN4 708 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 ERMNQ8TAM6 284 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 SNX29Q8TEQ0 813 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 TCP11Q8WWU5 503 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 BSNDQ8WZ55 320 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 LPPQ93052 612 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 SNX21Q969T3 373 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 INTS4Q96HW7 963 aaKnown RBP14.02□□□□□ -0.17
CHGA-203ENST00000553866 SAMD11Q96NU1 681 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 CASD1Q96PB1 797 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 CWH43Q9H720 699 aa14.02□□□□□ -0.17
CHGA-203ENST00000553866 ELAC1Q9H777 363 aaKnown RBP14.02□□□□□ -0.17
CHGA-203ENST00000553866 DDX19AQ9NUU7 478 aaKnown RBP14.02□□□□□ -0.17
CHGA-203ENST00000553866 PIN4Q9Y237 131 aaKnown RBP14.02□□□□□ -0.17
CHGA-203ENST00000553866 SPTBN5Q9NRC6 3674 aaKnown RBP14.02□□□□□ -0.17
CHGA-203ENST00000553866 A0A0U1RQF3 1178 aa14.01□□□□□ -0.17
CHGA-203ENST00000553866 VWA3AA6NCI4 1184 aa14.01□□□□□ -0.17
CHGA-203ENST00000553866 LAD1O00515 517 aa14.01□□□□□ -0.17
CHGA-203ENST00000553866 ASAP2O43150 1006 aa14.01□□□□□ -0.17
CHGA-203ENST00000553866 GTPBP6O43824 516 aaPredicted RBP14.01□□□□□ -0.17
CHGA-203ENST00000553866 CSPG5O95196 566 aa14.01□□□□□ -0.17
CHGA-203ENST00000553866 SFPQP23246 707 aaKnown RBP eCLIP14.01□□□□□ -0.17
CHGA-203ENST00000553866 DNAJB1P25685 340 aa14.01□□□□□ -0.17
CHGA-203ENST00000553866 HOXA11P31270 313 aaPredicted RBP14.01□□□□□ -0.17
CHGA-203ENST00000553866 PTENP60484 403 aa14.01□□□□□ -0.17
CHGA-203ENST00000553866 AMHR2Q16671 573 aa14.01□□□□□ -0.17
CHGA-203ENST00000553866 CLLU1OSQ5K130 101 aa14.01□□□□□ -0.17
CHGA-203ENST00000553866 UBXN11Q5T124 520 aa14.01□□□□□ -0.17
CHGA-203ENST00000553866 PADI6Q6TGC4 694 aa14.01□□□□□ -0.17
CHGA-203ENST00000553866 SRGAP1Q7Z6B7 1085 aa14.01□□□□□ -0.17
CHGA-203ENST00000553866 CCDC43Q96MW1 224 aaKnown RBP14.01□□□□□ -0.17
CHGA-203ENST00000553866 PNMA5Q96PV4 448 aa14.01□□□□□ -0.17
CHGA-203ENST00000553866 INO80BQ9C086 356 aaPredicted RBP14.01□□□□□ -0.17
CHGA-203ENST00000553866 ALG13Q9NP73 1137 aaKnown RBP14.01□□□□□ -0.17
CHGA-203ENST00000553866 AGPAT5Q9NUQ2 364 aa14.01□□□□□ -0.17
CHGA-203ENST00000553866 TYW1Q9NV66 732 aaKnown RBP14.01□□□□□ -0.17
CHGA-203ENST00000553866 MTMR6Q9Y217 621 aa14.01□□□□□ -0.17
CHGA-203ENST00000553866 CLIC4Q9Y696 253 aa14.01□□□□□ -0.17
CHGA-203ENST00000553866 PLXNA4Q9HCM2 1894 aa14.01□□□□□ -0.17
CHGA-203ENST00000553866 ARHGEF35A5YM69 484 aa14□□□□□ -0.17
CHGA-203ENST00000553866 CYP11B2P19099 503 aa14□□□□□ -0.17
CHGA-203ENST00000553866 PHKA2P46019 1235 aa14□□□□□ -0.17
CHGA-203ENST00000553866 MBTD1Q05BQ5 628 aa14□□□□□ -0.17
CHGA-203ENST00000553866 CAMK1Q14012 370 aa14□□□□□ -0.17
CHGA-203ENST00000553866 MXD4Q14582 209 aaPredicted RBP14□□□□□ -0.17
CHGA-203ENST00000553866 SF3A1Q15459 793 aaKnown RBP14□□□□□ -0.17
CHGA-203ENST00000553866 HAUS3Q68CZ6 603 aa14□□□□□ -0.17
CHGA-203ENST00000553866 TWF2Q6IBS0 349 aaKnown RBP14□□□□□ -0.17
CHGA-203ENST00000553866 FAM43BQ6ZT52 329 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms