RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 GPR15P49685 360 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 GALK1P51570 392 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 AK2P54819 239 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 BCAR1P56945 870 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 CDK17Q00537 523 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 NOLC1Q14978 699 aaKnown RBP eCLIP4.87□□□□□ -1.63
TDP1-207ENST00000553617 NR1I3Q14994 352 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 GRAMD1BQ3KR37 738 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 C3orf36Q3SXR2 165 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 CCDC178Q5BJE1 867 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 TEPPQ6URK8 271 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 PARD3BQ8TEW8 1205 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 NRG4Q8WWG1 115 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 FATE1Q969F0 183 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 TOE1Q96GM8 510 aaKnown RBP4.87□□□□□ -1.63
TDP1-207ENST00000553617 HAPLN2Q9GZV7 340 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 BHMT2Q9H2M3 363 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 MTG2Q9H4K7 406 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 NLRC4Q9NPP4 1024 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 PAK6Q9NQU5 681 aaPredicted RBP4.87□□□□□ -1.63
TDP1-207ENST00000553617 EVLQ9UI08 416 aaPredicted RBP4.87□□□□□ -1.63
TDP1-207ENST00000553617 ADAMTS6Q9UKP5 1117 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 L1RE1Q9UN81 338 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 COBLO75128 1261 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 PCDH8O95206 1070 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 FOSP01100 380 aaPredicted RBP4.86□□□□□ -1.63
TDP1-207ENST00000553617 IL12RB1P42701 662 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 MCAMP43121 646 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 PPARAQ07869 468 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 KRT72Q14CN4 511 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 CR1LQ2VPA4 569 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 ANO6Q4KMQ2 910 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 SWSAP1Q6NVH7 229 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 XRRA1Q6P2D8 792 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 LRSAM1Q6UWE0 723 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 NPNTQ6UXI9 565 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 RPTNQ6XPR3 784 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 CCDC149Q6ZUS6 474 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 KRT78Q8N1N4 520 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 CAMKK1Q8N5S9 505 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 CALML6Q8TD86 181 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 RPGRQ92834 1020 aaKnown RBP4.86□□□□□ -1.63
TDP1-207ENST00000553617 RSAD1Q9HA92 442 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 SLC39A2Q9NP94 309 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 PLCB1Q9NQ66 1216 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 INCENPQ9NQS7 918 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 GALNT8Q9NY28 637 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 ARHGAP28Q9P2N2 729 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 PUF60Q9UHX1 559 aaKnown RBP4.86□□□□□ -1.63
TDP1-207ENST00000553617 CTNND2Q9UQB3 1225 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 PCDHB6Q9Y5E3 794 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 HCFC2Q9Y5Z7 792 aa4.86□□□□□ -1.63
TDP1-207ENST00000553617 KIAA1324LA8MWY0 1029 aaPredicted RBP4.85□□□□□ -1.63
TDP1-207ENST00000553617 ADAMTS4O75173 837 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 PPFIA4O75335 1185 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 TCEA3O75764 348 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 SEC24DO94855 1032 aaPredicted RBP4.85□□□□□ -1.63
TDP1-207ENST00000553617 MYL3P08590 195 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 ENO2P09104 434 aaPredicted RBP4.85□□□□□ -1.63
TDP1-207ENST00000553617 HTR1BP28222 390 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 CD97P48960 835 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 MAPKAPK2P49137 400 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 CCT2P78371 535 aaKnown RBP4.85□□□□□ -1.63
TDP1-207ENST00000553617 PRR5P85299 388 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 DSC2Q02487 901 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 PPP3CAQ08209 521 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 STILQ15468 1287 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 ZRSR2Q15696 482 aaKnown RBP4.85□□□□□ -1.63
TDP1-207ENST00000553617 KIAA0753Q2KHM9 967 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 PLEKHN1Q494U1 663 aaPredicted RBP4.85□□□□□ -1.63
TDP1-207ENST00000553617 INO80DQ53TQ3 878 aaPredicted RBP4.85□□□□□ -1.63
TDP1-207ENST00000553617 KANK2Q63ZY3 851 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 BTNL9Q6UXG8 535 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 LIPIQ6XZB0 460 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 GAREM2Q75VX8 874 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 SRLQ86TD4 932 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 TICAM2Q86XR7 235 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 FAM186BQ8IYM0 893 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 ENAHQ8N8S7 591 aaPredicted RBP4.85□□□□□ -1.63
TDP1-207ENST00000553617 CDYL2Q8N8U2 506 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 FLCNQ8NFG4 579 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 GAB3Q8WWW8 586 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 MYLIPQ8WY64 445 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 TNIP3Q96KP6 325 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 CGRRF1Q99675 332 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 MYD88Q99836 296 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 MBNL3Q9NUK0 354 aaKnown RBP4.85□□□□□ -1.63
TDP1-207ENST00000553617 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.85□□□□□ -1.63
TDP1-207ENST00000553617 FNIP2Q9P278 1114 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 POLHQ9Y253 713 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 YBX2Q9Y2T7 364 aaKnown RBP4.85□□□□□ -1.63
TDP1-207ENST00000553617 PCDHGB6Q9Y5F9 930 aa4.85□□□□□ -1.63
TDP1-207ENST00000553617 ABHD14A-ACY1A0A1B0GW23 586 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 GOLIM4O00461 696 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 RNASE1P07998 156 aaKnown RBP4.84□□□□□ -1.63
TDP1-207ENST00000553617 RAC2P15153 192 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 ZKSCAN1P17029 563 aaPredicted RBP4.84□□□□□ -1.63
TDP1-207ENST00000553617 APEX1P27695 318 aaKnown RBP4.84□□□□□ -1.63
TDP1-207ENST00000553617 SSTR4P31391 388 aa4.84□□□□□ -1.63
TDP1-207ENST00000553617 CACNB3P54284 484 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms